Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048227: plasma membrane to endosome transport0.00E+00
2GO:0006725: cellular aromatic compound metabolic process0.00E+00
3GO:0015833: peptide transport0.00E+00
4GO:0046459: short-chain fatty acid metabolic process0.00E+00
5GO:0046167: glycerol-3-phosphate biosynthetic process4.60E-05
6GO:1990641: response to iron ion starvation4.60E-05
7GO:0060919: auxin influx1.13E-04
8GO:0009727: detection of ethylene stimulus1.13E-04
9GO:0006101: citrate metabolic process1.13E-04
10GO:0042939: tripeptide transport1.13E-04
11GO:0009308: amine metabolic process1.13E-04
12GO:0090156: cellular sphingolipid homeostasis1.13E-04
13GO:0006641: triglyceride metabolic process1.13E-04
14GO:0046786: viral replication complex formation and maintenance1.95E-04
15GO:0019563: glycerol catabolic process1.95E-04
16GO:0071398: cellular response to fatty acid1.95E-04
17GO:0051259: protein oligomerization2.85E-04
18GO:0006624: vacuolar protein processing2.85E-04
19GO:0006072: glycerol-3-phosphate metabolic process2.85E-04
20GO:0006809: nitric oxide biosynthetic process2.85E-04
21GO:0071281: cellular response to iron ion3.27E-04
22GO:0010188: response to microbial phytotoxin3.84E-04
23GO:0042938: dipeptide transport3.84E-04
24GO:0006086: acetyl-CoA biosynthetic process from pyruvate5.98E-04
25GO:0006751: glutathione catabolic process5.98E-04
26GO:0042732: D-xylose metabolic process5.98E-04
27GO:0010315: auxin efflux5.98E-04
28GO:0080167: response to karrikin6.60E-04
29GO:0070370: cellular heat acclimation8.33E-04
30GO:0046470: phosphatidylcholine metabolic process8.33E-04
31GO:0006102: isocitrate metabolic process9.57E-04
32GO:0016559: peroxisome fission9.57E-04
33GO:0006098: pentose-phosphate shunt1.22E-03
34GO:0008202: steroid metabolic process1.36E-03
35GO:0007064: mitotic sister chromatid cohesion1.51E-03
36GO:0006535: cysteine biosynthetic process from serine1.51E-03
37GO:0009641: shade avoidance1.51E-03
38GO:0010540: basipetal auxin transport2.14E-03
39GO:0034605: cellular response to heat2.14E-03
40GO:0002237: response to molecule of bacterial origin2.14E-03
41GO:0071732: cellular response to nitric oxide2.31E-03
42GO:0010030: positive regulation of seed germination2.31E-03
43GO:0007031: peroxisome organization2.31E-03
44GO:0034976: response to endoplasmic reticulum stress2.49E-03
45GO:0019344: cysteine biosynthetic process2.67E-03
46GO:0009693: ethylene biosynthetic process3.43E-03
47GO:0009826: unidimensional cell growth4.05E-03
48GO:0008360: regulation of cell shape4.25E-03
49GO:0010182: sugar mediated signaling pathway4.25E-03
50GO:0009723: response to ethylene4.86E-03
51GO:0006635: fatty acid beta-oxidation4.91E-03
52GO:0010583: response to cyclopentenone5.13E-03
53GO:0007264: small GTPase mediated signal transduction5.13E-03
54GO:0006979: response to oxidative stress5.37E-03
55GO:0010286: heat acclimation5.84E-03
56GO:0045454: cell redox homeostasis6.23E-03
57GO:0001666: response to hypoxia6.32E-03
58GO:0010311: lateral root formation7.87E-03
59GO:0009753: response to jasmonic acid8.24E-03
60GO:0010043: response to zinc ion8.41E-03
61GO:0007568: aging8.41E-03
62GO:0006865: amino acid transport8.68E-03
63GO:0034599: cellular response to oxidative stress9.25E-03
64GO:0006099: tricarboxylic acid cycle9.25E-03
65GO:0009640: photomorphogenesis1.07E-02
66GO:0009744: response to sucrose1.07E-02
67GO:0051603: proteolysis involved in cellular protein catabolic process1.35E-02
68GO:0006857: oligopeptide transport1.39E-02
69GO:0009611: response to wounding1.40E-02
70GO:0006096: glycolytic process1.49E-02
71GO:0048367: shoot system development1.52E-02
72GO:0018105: peptidyl-serine phosphorylation1.73E-02
73GO:0009742: brassinosteroid mediated signaling pathway1.77E-02
74GO:0006457: protein folding1.77E-02
75GO:0009790: embryo development2.22E-02
76GO:0055114: oxidation-reduction process2.44E-02
77GO:0010150: leaf senescence2.50E-02
78GO:0042742: defense response to bacterium2.77E-02
79GO:0009617: response to bacterium2.84E-02
80GO:0010468: regulation of gene expression2.84E-02
81GO:0015031: protein transport3.52E-02
82GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.08E-02
83GO:0005975: carbohydrate metabolic process4.20E-02
84GO:0006869: lipid transport4.83E-02
RankGO TermAdjusted P value
1GO:0015334: high-affinity oligopeptide transporter activity0.00E+00
2GO:0004370: glycerol kinase activity0.00E+00
3GO:0009045: xylose isomerase activity0.00E+00
4GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen0.00E+00
5GO:0015197: peptide transporter activity0.00E+00
6GO:0030544: Hsp70 protein binding4.60E-05
7GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity4.60E-05
8GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity4.60E-05
9GO:0052595: aliphatic-amine oxidase activity4.60E-05
10GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity4.60E-05
11GO:0004142: diacylglycerol cholinephosphotransferase activity1.13E-04
12GO:0019200: carbohydrate kinase activity1.13E-04
13GO:0042937: tripeptide transporter activity1.13E-04
14GO:0004566: beta-glucuronidase activity1.13E-04
15GO:0017040: ceramidase activity1.13E-04
16GO:0003994: aconitate hydratase activity1.13E-04
17GO:0003840: gamma-glutamyltransferase activity1.95E-04
18GO:0036374: glutathione hydrolase activity1.95E-04
19GO:0016595: glutamate binding1.95E-04
20GO:0005093: Rab GDP-dissociation inhibitor activity1.95E-04
21GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity2.85E-04
22GO:0048027: mRNA 5'-UTR binding2.85E-04
23GO:0003995: acyl-CoA dehydrogenase activity3.84E-04
24GO:0042936: dipeptide transporter activity3.84E-04
25GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity3.84E-04
26GO:0010328: auxin influx transmembrane transporter activity3.84E-04
27GO:0008198: ferrous iron binding4.88E-04
28GO:0003997: acyl-CoA oxidase activity4.88E-04
29GO:0004124: cysteine synthase activity7.13E-04
30GO:0008142: oxysterol binding1.09E-03
31GO:0000989: transcription factor activity, transcription factor binding1.22E-03
32GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.22E-03
33GO:0004713: protein tyrosine kinase activity1.51E-03
34GO:0000976: transcription regulatory region sequence-specific DNA binding1.81E-03
35GO:0010329: auxin efflux transmembrane transporter activity1.98E-03
36GO:0008131: primary amine oxidase activity2.14E-03
37GO:0004175: endopeptidase activity2.14E-03
38GO:0031418: L-ascorbic acid binding2.67E-03
39GO:0005507: copper ion binding3.41E-03
40GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.47E-03
41GO:0003756: protein disulfide isomerase activity3.63E-03
42GO:0048038: quinone binding4.91E-03
43GO:0004197: cysteine-type endopeptidase activity5.13E-03
44GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.37E-03
45GO:0008237: metallopeptidase activity5.84E-03
46GO:0051213: dioxygenase activity6.32E-03
47GO:0016491: oxidoreductase activity7.54E-03
48GO:0005096: GTPase activator activity7.87E-03
49GO:0050897: cobalt ion binding8.41E-03
50GO:0051539: 4 iron, 4 sulfur cluster binding9.82E-03
51GO:0015171: amino acid transmembrane transporter activity1.42E-02
52GO:0030246: carbohydrate binding1.84E-02
53GO:0030170: pyridoxal phosphate binding2.14E-02
54GO:0042802: identical protein binding2.97E-02
55GO:0005215: transporter activity3.07E-02
56GO:0003682: chromatin binding3.55E-02
57GO:0050660: flavin adenine dinucleotide binding3.79E-02
58GO:0004674: protein serine/threonine kinase activity3.97E-02
59GO:0043565: sequence-specific DNA binding4.16E-02
RankGO TermAdjusted P value
1GO:0000323: lytic vacuole2.85E-04
2GO:0005774: vacuolar membrane3.37E-04
3GO:0005773: vacuole8.02E-04
4GO:0009514: glyoxysome1.09E-03
5GO:0005779: integral component of peroxisomal membrane1.09E-03
6GO:0005765: lysosomal membrane1.66E-03
7GO:0009705: plant-type vacuole membrane2.74E-03
8GO:0005886: plasma membrane3.20E-03
9GO:0016021: integral component of membrane5.27E-03
10GO:0005778: peroxisomal membrane5.84E-03
11GO:0000325: plant-type vacuole8.41E-03
12GO:0005777: peroxisome1.57E-02
13GO:0005783: endoplasmic reticulum1.84E-02
14GO:0005623: cell2.03E-02
15GO:0005759: mitochondrial matrix2.34E-02
16GO:0009505: plant-type cell wall3.47E-02
17GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.65E-02
18GO:0009506: plasmodesma4.67E-02
Gene type



Gene DE type