GO Enrichment Analysis of Co-expressed Genes with
AT5G25610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 3.99E-07 |
| 4 | GO:0009735: response to cytokinin | 1.49E-06 |
| 5 | GO:0005991: trehalose metabolic process | 4.45E-05 |
| 6 | GO:1902025: nitrate import | 4.45E-05 |
| 7 | GO:0080051: cutin transport | 4.45E-05 |
| 8 | GO:0090548: response to nitrate starvation | 4.45E-05 |
| 9 | GO:0015908: fatty acid transport | 1.10E-04 |
| 10 | GO:0043255: regulation of carbohydrate biosynthetic process | 1.10E-04 |
| 11 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.10E-04 |
| 12 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.10E-04 |
| 13 | GO:0016998: cell wall macromolecule catabolic process | 1.30E-04 |
| 14 | GO:0006000: fructose metabolic process | 1.89E-04 |
| 15 | GO:0010182: sugar mediated signaling pathway | 2.22E-04 |
| 16 | GO:0045727: positive regulation of translation | 3.73E-04 |
| 17 | GO:0015994: chlorophyll metabolic process | 3.73E-04 |
| 18 | GO:0006546: glycine catabolic process | 3.73E-04 |
| 19 | GO:0010021: amylopectin biosynthetic process | 3.73E-04 |
| 20 | GO:0010222: stem vascular tissue pattern formation | 3.73E-04 |
| 21 | GO:0006656: phosphatidylcholine biosynthetic process | 4.75E-04 |
| 22 | GO:0010236: plastoquinone biosynthetic process | 4.75E-04 |
| 23 | GO:0009107: lipoate biosynthetic process | 4.75E-04 |
| 24 | GO:0009913: epidermal cell differentiation | 5.82E-04 |
| 25 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 5.82E-04 |
| 26 | GO:0010337: regulation of salicylic acid metabolic process | 5.82E-04 |
| 27 | GO:0006561: proline biosynthetic process | 5.82E-04 |
| 28 | GO:0010189: vitamin E biosynthetic process | 6.94E-04 |
| 29 | GO:0015979: photosynthesis | 7.40E-04 |
| 30 | GO:0009395: phospholipid catabolic process | 8.11E-04 |
| 31 | GO:0009772: photosynthetic electron transport in photosystem II | 8.11E-04 |
| 32 | GO:0008610: lipid biosynthetic process | 9.32E-04 |
| 33 | GO:0070413: trehalose metabolism in response to stress | 9.32E-04 |
| 34 | GO:0032259: methylation | 9.62E-04 |
| 35 | GO:0006002: fructose 6-phosphate metabolic process | 1.06E-03 |
| 36 | GO:0032544: plastid translation | 1.06E-03 |
| 37 | GO:0009809: lignin biosynthetic process | 1.10E-03 |
| 38 | GO:0034765: regulation of ion transmembrane transport | 1.19E-03 |
| 39 | GO:0009409: response to cold | 1.44E-03 |
| 40 | GO:0006032: chitin catabolic process | 1.47E-03 |
| 41 | GO:0009688: abscisic acid biosynthetic process | 1.47E-03 |
| 42 | GO:0000038: very long-chain fatty acid metabolic process | 1.61E-03 |
| 43 | GO:0009750: response to fructose | 1.61E-03 |
| 44 | GO:0005983: starch catabolic process | 1.77E-03 |
| 45 | GO:0005986: sucrose biosynthetic process | 1.92E-03 |
| 46 | GO:0010588: cotyledon vascular tissue pattern formation | 1.92E-03 |
| 47 | GO:0006094: gluconeogenesis | 1.92E-03 |
| 48 | GO:0019253: reductive pentose-phosphate cycle | 2.09E-03 |
| 49 | GO:0009825: multidimensional cell growth | 2.25E-03 |
| 50 | GO:0010167: response to nitrate | 2.25E-03 |
| 51 | GO:0005985: sucrose metabolic process | 2.25E-03 |
| 52 | GO:0010053: root epidermal cell differentiation | 2.25E-03 |
| 53 | GO:0006633: fatty acid biosynthetic process | 2.40E-03 |
| 54 | GO:0019762: glucosinolate catabolic process | 2.42E-03 |
| 55 | GO:0005992: trehalose biosynthetic process | 2.60E-03 |
| 56 | GO:0019953: sexual reproduction | 2.77E-03 |
| 57 | GO:0007017: microtubule-based process | 2.77E-03 |
| 58 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.77E-03 |
| 59 | GO:0042335: cuticle development | 3.93E-03 |
| 60 | GO:0042391: regulation of membrane potential | 3.93E-03 |
| 61 | GO:0048544: recognition of pollen | 4.35E-03 |
| 62 | GO:0015986: ATP synthesis coupled proton transport | 4.35E-03 |
| 63 | GO:0019252: starch biosynthetic process | 4.56E-03 |
| 64 | GO:0042742: defense response to bacterium | 5.05E-03 |
| 65 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.18E-03 |
| 66 | GO:0071805: potassium ion transmembrane transport | 5.68E-03 |
| 67 | GO:0009651: response to salt stress | 5.71E-03 |
| 68 | GO:0016126: sterol biosynthetic process | 6.15E-03 |
| 69 | GO:0006869: lipid transport | 6.56E-03 |
| 70 | GO:0010411: xyloglucan metabolic process | 6.89E-03 |
| 71 | GO:0016042: lipid catabolic process | 7.17E-03 |
| 72 | GO:0009408: response to heat | 7.38E-03 |
| 73 | GO:0030244: cellulose biosynthetic process | 7.39E-03 |
| 74 | GO:0018298: protein-chromophore linkage | 7.39E-03 |
| 75 | GO:0009832: plant-type cell wall biogenesis | 7.65E-03 |
| 76 | GO:0010218: response to far red light | 7.91E-03 |
| 77 | GO:0009637: response to blue light | 8.71E-03 |
| 78 | GO:0010114: response to red light | 1.04E-02 |
| 79 | GO:0042546: cell wall biogenesis | 1.07E-02 |
| 80 | GO:0006364: rRNA processing | 1.28E-02 |
| 81 | GO:0006096: glycolytic process | 1.45E-02 |
| 82 | GO:0042744: hydrogen peroxide catabolic process | 2.12E-02 |
| 83 | GO:0009790: embryo development | 2.16E-02 |
| 84 | GO:0010150: leaf senescence | 2.43E-02 |
| 85 | GO:0009451: RNA modification | 2.47E-02 |
| 86 | GO:0009414: response to water deprivation | 2.60E-02 |
| 87 | GO:0071555: cell wall organization | 2.66E-02 |
| 88 | GO:0006470: protein dephosphorylation | 2.68E-02 |
| 89 | GO:0080167: response to karrikin | 3.87E-02 |
| 90 | GO:0005975: carbohydrate metabolic process | 4.03E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 3 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 4 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 5 | GO:0050308: sugar-phosphatase activity | 4.45E-05 |
| 6 | GO:0019203: carbohydrate phosphatase activity | 4.45E-05 |
| 7 | GO:0015245: fatty acid transporter activity | 4.45E-05 |
| 8 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 4.45E-05 |
| 9 | GO:0033201: alpha-1,4-glucan synthase activity | 1.10E-04 |
| 10 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.10E-04 |
| 11 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.10E-04 |
| 12 | GO:0047746: chlorophyllase activity | 1.10E-04 |
| 13 | GO:0004373: glycogen (starch) synthase activity | 1.89E-04 |
| 14 | GO:0016992: lipoate synthase activity | 1.89E-04 |
| 15 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 2.78E-04 |
| 16 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 3.73E-04 |
| 17 | GO:0004506: squalene monooxygenase activity | 3.73E-04 |
| 18 | GO:0009011: starch synthase activity | 3.73E-04 |
| 19 | GO:0042277: peptide binding | 3.73E-04 |
| 20 | GO:2001070: starch binding | 5.82E-04 |
| 21 | GO:0005242: inward rectifier potassium channel activity | 6.94E-04 |
| 22 | GO:0052747: sinapyl alcohol dehydrogenase activity | 9.32E-04 |
| 23 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.19E-03 |
| 24 | GO:0030234: enzyme regulator activity | 1.47E-03 |
| 25 | GO:0004568: chitinase activity | 1.47E-03 |
| 26 | GO:0016746: transferase activity, transferring acyl groups | 1.58E-03 |
| 27 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 1.77E-03 |
| 28 | GO:0004565: beta-galactosidase activity | 1.92E-03 |
| 29 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.92E-03 |
| 30 | GO:0008266: poly(U) RNA binding | 2.09E-03 |
| 31 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 2.42E-03 |
| 32 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 2.42E-03 |
| 33 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 2.42E-03 |
| 34 | GO:0031409: pigment binding | 2.42E-03 |
| 35 | GO:0004176: ATP-dependent peptidase activity | 2.96E-03 |
| 36 | GO:0008168: methyltransferase activity | 3.89E-03 |
| 37 | GO:0030551: cyclic nucleotide binding | 3.93E-03 |
| 38 | GO:0005249: voltage-gated potassium channel activity | 3.93E-03 |
| 39 | GO:0016788: hydrolase activity, acting on ester bonds | 4.12E-03 |
| 40 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 4.14E-03 |
| 41 | GO:0050662: coenzyme binding | 4.35E-03 |
| 42 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.77E-03 |
| 43 | GO:0016791: phosphatase activity | 5.45E-03 |
| 44 | GO:0052689: carboxylic ester hydrolase activity | 5.53E-03 |
| 45 | GO:0005200: structural constituent of cytoskeleton | 5.68E-03 |
| 46 | GO:0016168: chlorophyll binding | 6.39E-03 |
| 47 | GO:0030247: polysaccharide binding | 6.89E-03 |
| 48 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.89E-03 |
| 49 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 7.14E-03 |
| 50 | GO:0003993: acid phosphatase activity | 8.99E-03 |
| 51 | GO:0008289: lipid binding | 1.03E-02 |
| 52 | GO:0016298: lipase activity | 1.32E-02 |
| 53 | GO:0030246: carbohydrate binding | 1.77E-02 |
| 54 | GO:0005507: copper ion binding | 1.87E-02 |
| 55 | GO:0019843: rRNA binding | 1.93E-02 |
| 56 | GO:0016301: kinase activity | 2.18E-02 |
| 57 | GO:0042802: identical protein binding | 2.88E-02 |
| 58 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.88E-02 |
| 59 | GO:0004601: peroxidase activity | 3.32E-02 |
| 60 | GO:0050660: flavin adenine dinucleotide binding | 3.68E-02 |
| 61 | GO:0008233: peptidase activity | 3.82E-02 |
| 62 | GO:0004672: protein kinase activity | 3.90E-02 |
| 63 | GO:0042803: protein homodimerization activity | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010240: plastid pyruvate dehydrogenase complex | 0.00E+00 |
| 2 | GO:0048046: apoplast | 4.84E-08 |
| 3 | GO:0009534: chloroplast thylakoid | 3.40E-06 |
| 4 | GO:0009507: chloroplast | 4.51E-06 |
| 5 | GO:0009941: chloroplast envelope | 1.18E-04 |
| 6 | GO:0010287: plastoglobule | 1.62E-04 |
| 7 | GO:0009897: external side of plasma membrane | 1.89E-04 |
| 8 | GO:0009570: chloroplast stroma | 2.72E-04 |
| 9 | GO:0015630: microtubule cytoskeleton | 2.78E-04 |
| 10 | GO:0010319: stromule | 3.55E-04 |
| 11 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 5.82E-04 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 6.57E-04 |
| 13 | GO:0009501: amyloplast | 9.32E-04 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.19E-03 |
| 15 | GO:0005618: cell wall | 1.77E-03 |
| 16 | GO:0030076: light-harvesting complex | 2.25E-03 |
| 17 | GO:0009579: thylakoid | 2.60E-03 |
| 18 | GO:0046658: anchored component of plasma membrane | 3.47E-03 |
| 19 | GO:0005576: extracellular region | 4.11E-03 |
| 20 | GO:0009522: photosystem I | 4.35E-03 |
| 21 | GO:0005773: vacuole | 1.14E-02 |
| 22 | GO:0009706: chloroplast inner membrane | 1.65E-02 |
| 23 | GO:0005759: mitochondrial matrix | 2.27E-02 |
| 24 | GO:0009505: plant-type cell wall | 3.34E-02 |
| 25 | GO:0005874: microtubule | 3.78E-02 |
| 26 | GO:0005789: endoplasmic reticulum membrane | 4.06E-02 |