GO Enrichment Analysis of Co-expressed Genes with
AT5G24000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042407: cristae formation | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 4 | GO:0042026: protein refolding | 7.76E-06 |
| 5 | GO:0009767: photosynthetic electron transport chain | 5.70E-05 |
| 6 | GO:2000123: positive regulation of stomatal complex development | 1.04E-04 |
| 7 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.04E-04 |
| 8 | GO:0016117: carotenoid biosynthetic process | 1.73E-04 |
| 9 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.63E-04 |
| 10 | GO:0010239: chloroplast mRNA processing | 2.63E-04 |
| 11 | GO:0043572: plastid fission | 2.63E-04 |
| 12 | GO:2000038: regulation of stomatal complex development | 3.53E-04 |
| 13 | GO:0006546: glycine catabolic process | 3.53E-04 |
| 14 | GO:0009658: chloroplast organization | 4.31E-04 |
| 15 | GO:0016123: xanthophyll biosynthetic process | 4.50E-04 |
| 16 | GO:0010375: stomatal complex patterning | 4.50E-04 |
| 17 | GO:0010236: plastoquinone biosynthetic process | 4.50E-04 |
| 18 | GO:0010190: cytochrome b6f complex assembly | 5.51E-04 |
| 19 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.90E-04 |
| 20 | GO:0009793: embryo development ending in seed dormancy | 5.98E-04 |
| 21 | GO:0006458: 'de novo' protein folding | 6.58E-04 |
| 22 | GO:0008610: lipid biosynthetic process | 8.84E-04 |
| 23 | GO:0048193: Golgi vesicle transport | 1.00E-03 |
| 24 | GO:0009657: plastid organization | 1.00E-03 |
| 25 | GO:0043067: regulation of programmed cell death | 1.25E-03 |
| 26 | GO:0006415: translational termination | 1.53E-03 |
| 27 | GO:0019684: photosynthesis, light reaction | 1.53E-03 |
| 28 | GO:0045037: protein import into chloroplast stroma | 1.67E-03 |
| 29 | GO:0010020: chloroplast fission | 1.97E-03 |
| 30 | GO:0090351: seedling development | 2.13E-03 |
| 31 | GO:0007017: microtubule-based process | 2.62E-03 |
| 32 | GO:0061077: chaperone-mediated protein folding | 2.80E-03 |
| 33 | GO:0006730: one-carbon metabolic process | 2.97E-03 |
| 34 | GO:0007005: mitochondrion organization | 2.97E-03 |
| 35 | GO:0080092: regulation of pollen tube growth | 2.97E-03 |
| 36 | GO:0010082: regulation of root meristem growth | 3.15E-03 |
| 37 | GO:0010197: polar nucleus fusion | 3.91E-03 |
| 38 | GO:0007267: cell-cell signaling | 5.36E-03 |
| 39 | GO:0016126: sterol biosynthetic process | 5.81E-03 |
| 40 | GO:0009627: systemic acquired resistance | 6.27E-03 |
| 41 | GO:0016311: dephosphorylation | 6.74E-03 |
| 42 | GO:0008219: cell death | 6.98E-03 |
| 43 | GO:0006810: transport | 7.40E-03 |
| 44 | GO:0046686: response to cadmium ion | 7.97E-03 |
| 45 | GO:0009853: photorespiration | 8.23E-03 |
| 46 | GO:0006457: protein folding | 1.56E-02 |
| 47 | GO:0006396: RNA processing | 1.59E-02 |
| 48 | GO:0009790: embryo development | 2.03E-02 |
| 49 | GO:0006413: translational initiation | 2.18E-02 |
| 50 | GO:0007623: circadian rhythm | 2.29E-02 |
| 51 | GO:0009451: RNA modification | 2.33E-02 |
| 52 | GO:0008380: RNA splicing | 2.60E-02 |
| 53 | GO:0009860: pollen tube growth | 3.30E-02 |
| 54 | GO:0048366: leaf development | 3.52E-02 |
| 55 | GO:0015979: photosynthesis | 4.01E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 4 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 7.76E-06 |
| 5 | GO:0044183: protein binding involved in protein folding | 4.16E-05 |
| 6 | GO:0004047: aminomethyltransferase activity | 1.04E-04 |
| 7 | GO:0004817: cysteine-tRNA ligase activity | 1.04E-04 |
| 8 | GO:0010291: carotene beta-ring hydroxylase activity | 1.04E-04 |
| 9 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.04E-04 |
| 10 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 2.63E-04 |
| 11 | GO:0016149: translation release factor activity, codon specific | 2.63E-04 |
| 12 | GO:0080030: methyl indole-3-acetate esterase activity | 5.51E-04 |
| 13 | GO:0003747: translation release factor activity | 1.13E-03 |
| 14 | GO:0051082: unfolded protein binding | 1.42E-03 |
| 15 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.53E-03 |
| 16 | GO:0005528: FK506 binding | 2.46E-03 |
| 17 | GO:0004176: ATP-dependent peptidase activity | 2.80E-03 |
| 18 | GO:0005509: calcium ion binding | 4.10E-03 |
| 19 | GO:0019901: protein kinase binding | 4.31E-03 |
| 20 | GO:0004518: nuclease activity | 4.72E-03 |
| 21 | GO:0008483: transaminase activity | 5.36E-03 |
| 22 | GO:0008237: metallopeptidase activity | 5.36E-03 |
| 23 | GO:0005200: structural constituent of cytoskeleton | 5.36E-03 |
| 24 | GO:0004222: metalloendopeptidase activity | 7.47E-03 |
| 25 | GO:0003746: translation elongation factor activity | 8.23E-03 |
| 26 | GO:0003993: acid phosphatase activity | 8.48E-03 |
| 27 | GO:0005198: structural molecule activity | 1.07E-02 |
| 28 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.09E-02 |
| 29 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.39E-02 |
| 30 | GO:0016740: transferase activity | 1.47E-02 |
| 31 | GO:0022857: transmembrane transporter activity | 1.49E-02 |
| 32 | GO:0003779: actin binding | 1.52E-02 |
| 33 | GO:0019825: oxygen binding | 1.72E-02 |
| 34 | GO:0019843: rRNA binding | 1.82E-02 |
| 35 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.86E-02 |
| 36 | GO:0008565: protein transporter activity | 2.07E-02 |
| 37 | GO:0015144: carbohydrate transmembrane transporter activity | 2.07E-02 |
| 38 | GO:0005351: sugar:proton symporter activity | 2.25E-02 |
| 39 | GO:0003743: translation initiation factor activity | 2.56E-02 |
| 40 | GO:0016788: hydrolase activity, acting on ester bonds | 3.17E-02 |
| 41 | GO:0004674: protein serine/threonine kinase activity | 3.40E-02 |
| 42 | GO:0004672: protein kinase activity | 3.60E-02 |
| 43 | GO:0003729: mRNA binding | 3.64E-02 |
| 44 | GO:0004722: protein serine/threonine phosphatase activity | 4.43E-02 |
| 45 | GO:0003924: GTPase activity | 4.81E-02 |
| 46 | GO:0003735: structural constituent of ribosome | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 5.84E-13 |
| 3 | GO:0009570: chloroplast stroma | 4.86E-07 |
| 4 | GO:0030095: chloroplast photosystem II | 7.12E-07 |
| 5 | GO:0009941: chloroplast envelope | 1.28E-06 |
| 6 | GO:0009654: photosystem II oxygen evolving complex | 1.57E-06 |
| 7 | GO:0019898: extrinsic component of membrane | 5.84E-06 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 7.06E-06 |
| 9 | GO:0045298: tubulin complex | 1.13E-03 |
| 10 | GO:0016324: apical plasma membrane | 1.39E-03 |
| 11 | GO:0009706: chloroplast inner membrane | 1.42E-03 |
| 12 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.13E-03 |
| 13 | GO:0005759: mitochondrial matrix | 2.21E-03 |
| 14 | GO:0005875: microtubule associated complex | 2.29E-03 |
| 15 | GO:0009534: chloroplast thylakoid | 2.37E-03 |
| 16 | GO:0009535: chloroplast thylakoid membrane | 2.72E-03 |
| 17 | GO:0010319: stromule | 5.36E-03 |
| 18 | GO:0031977: thylakoid lumen | 9.28E-03 |
| 19 | GO:0005856: cytoskeleton | 1.07E-02 |
| 20 | GO:0022626: cytosolic ribosome | 1.15E-02 |
| 21 | GO:0005623: cell | 1.86E-02 |
| 22 | GO:0048046: apoplast | 2.33E-02 |
| 23 | GO:0009536: plastid | 3.01E-02 |
| 24 | GO:0005874: microtubule | 3.56E-02 |
| 25 | GO:0031969: chloroplast membrane | 3.65E-02 |
| 26 | GO:0005886: plasma membrane | 4.29E-02 |