GO Enrichment Analysis of Co-expressed Genes with
AT5G22620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0010027: thylakoid membrane organization | 5.23E-07 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 7.83E-07 |
| 6 | GO:0010196: nonphotochemical quenching | 1.90E-05 |
| 7 | GO:0080051: cutin transport | 5.94E-05 |
| 8 | GO:0034337: RNA folding | 5.94E-05 |
| 9 | GO:0005983: starch catabolic process | 8.25E-05 |
| 10 | GO:0015908: fatty acid transport | 1.44E-04 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.44E-04 |
| 12 | GO:0006000: fructose metabolic process | 2.46E-04 |
| 13 | GO:0090391: granum assembly | 2.46E-04 |
| 14 | GO:0016050: vesicle organization | 2.46E-04 |
| 15 | GO:0008152: metabolic process | 2.67E-04 |
| 16 | GO:1901332: negative regulation of lateral root development | 3.57E-04 |
| 17 | GO:0009152: purine ribonucleotide biosynthetic process | 3.57E-04 |
| 18 | GO:0046653: tetrahydrofolate metabolic process | 3.57E-04 |
| 19 | GO:0010021: amylopectin biosynthetic process | 4.78E-04 |
| 20 | GO:0010222: stem vascular tissue pattern formation | 4.78E-04 |
| 21 | GO:0015994: chlorophyll metabolic process | 4.78E-04 |
| 22 | GO:0080110: sporopollenin biosynthetic process | 6.05E-04 |
| 23 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 7.40E-04 |
| 24 | GO:1901259: chloroplast rRNA processing | 8.82E-04 |
| 25 | GO:0009082: branched-chain amino acid biosynthetic process | 8.82E-04 |
| 26 | GO:0009099: valine biosynthetic process | 8.82E-04 |
| 27 | GO:0006400: tRNA modification | 1.03E-03 |
| 28 | GO:0015979: photosynthesis | 1.17E-03 |
| 29 | GO:0010492: maintenance of shoot apical meristem identity | 1.18E-03 |
| 30 | GO:0009097: isoleucine biosynthetic process | 1.35E-03 |
| 31 | GO:0006002: fructose 6-phosphate metabolic process | 1.35E-03 |
| 32 | GO:0071482: cellular response to light stimulus | 1.35E-03 |
| 33 | GO:0015996: chlorophyll catabolic process | 1.35E-03 |
| 34 | GO:0048507: meristem development | 1.52E-03 |
| 35 | GO:0000373: Group II intron splicing | 1.52E-03 |
| 36 | GO:0009098: leucine biosynthetic process | 1.69E-03 |
| 37 | GO:0009750: response to fructose | 2.07E-03 |
| 38 | GO:0046856: phosphatidylinositol dephosphorylation | 2.07E-03 |
| 39 | GO:0010588: cotyledon vascular tissue pattern formation | 2.47E-03 |
| 40 | GO:0010628: positive regulation of gene expression | 2.47E-03 |
| 41 | GO:0006094: gluconeogenesis | 2.47E-03 |
| 42 | GO:0005986: sucrose biosynthetic process | 2.47E-03 |
| 43 | GO:0090351: seedling development | 2.89E-03 |
| 44 | GO:0035428: hexose transmembrane transport | 4.05E-03 |
| 45 | GO:0010584: pollen exine formation | 4.55E-03 |
| 46 | GO:0046323: glucose import | 5.34E-03 |
| 47 | GO:0048544: recognition of pollen | 5.61E-03 |
| 48 | GO:0019252: starch biosynthetic process | 5.89E-03 |
| 49 | GO:0015995: chlorophyll biosynthetic process | 8.92E-03 |
| 50 | GO:0016311: dephosphorylation | 9.25E-03 |
| 51 | GO:0010311: lateral root formation | 9.93E-03 |
| 52 | GO:0009853: photorespiration | 1.13E-02 |
| 53 | GO:0005975: carbohydrate metabolic process | 1.39E-02 |
| 54 | GO:0006364: rRNA processing | 1.67E-02 |
| 55 | GO:0009058: biosynthetic process | 2.62E-02 |
| 56 | GO:0009451: RNA modification | 3.22E-02 |
| 57 | GO:0006470: protein dephosphorylation | 3.49E-02 |
| 58 | GO:0042254: ribosome biogenesis | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0016787: hydrolase activity | 4.34E-06 |
| 3 | GO:0050308: sugar-phosphatase activity | 5.94E-05 |
| 4 | GO:0004856: xylulokinase activity | 5.94E-05 |
| 5 | GO:0019203: carbohydrate phosphatase activity | 5.94E-05 |
| 6 | GO:0034256: chlorophyll(ide) b reductase activity | 5.94E-05 |
| 7 | GO:0015245: fatty acid transporter activity | 5.94E-05 |
| 8 | GO:0050139: nicotinate-N-glucosyltransferase activity | 5.94E-05 |
| 9 | GO:0016630: protochlorophyllide reductase activity | 1.44E-04 |
| 10 | GO:0047746: chlorophyllase activity | 1.44E-04 |
| 11 | GO:0033201: alpha-1,4-glucan synthase activity | 1.44E-04 |
| 12 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.44E-04 |
| 13 | GO:0005528: FK506 binding | 1.58E-04 |
| 14 | GO:0004373: glycogen (starch) synthase activity | 2.46E-04 |
| 15 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.46E-04 |
| 16 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.46E-04 |
| 17 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 3.57E-04 |
| 18 | GO:0052656: L-isoleucine transaminase activity | 3.57E-04 |
| 19 | GO:0052654: L-leucine transaminase activity | 3.57E-04 |
| 20 | GO:0052655: L-valine transaminase activity | 3.57E-04 |
| 21 | GO:0004084: branched-chain-amino-acid transaminase activity | 4.78E-04 |
| 22 | GO:0009011: starch synthase activity | 4.78E-04 |
| 23 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 6.05E-04 |
| 24 | GO:0003959: NADPH dehydrogenase activity | 6.05E-04 |
| 25 | GO:0042578: phosphoric ester hydrolase activity | 7.40E-04 |
| 26 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 7.40E-04 |
| 27 | GO:2001070: starch binding | 7.40E-04 |
| 28 | GO:0043022: ribosome binding | 1.18E-03 |
| 29 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.37E-03 |
| 30 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.52E-03 |
| 31 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 2.27E-03 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 3.81E-03 |
| 33 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.82E-03 |
| 34 | GO:0005355: glucose transmembrane transporter activity | 5.61E-03 |
| 35 | GO:0050662: coenzyme binding | 5.61E-03 |
| 36 | GO:0016597: amino acid binding | 7.65E-03 |
| 37 | GO:0004721: phosphoprotein phosphatase activity | 8.92E-03 |
| 38 | GO:0003824: catalytic activity | 9.17E-03 |
| 39 | GO:0003746: translation elongation factor activity | 1.13E-02 |
| 40 | GO:0016491: oxidoreductase activity | 1.16E-02 |
| 41 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.24E-02 |
| 42 | GO:0005198: structural molecule activity | 1.47E-02 |
| 43 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.01E-02 |
| 44 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.01E-02 |
| 45 | GO:0016874: ligase activity | 2.06E-02 |
| 46 | GO:0019843: rRNA binding | 2.52E-02 |
| 47 | GO:0030246: carbohydrate binding | 2.57E-02 |
| 48 | GO:0015144: carbohydrate transmembrane transporter activity | 2.86E-02 |
| 49 | GO:0005351: sugar:proton symporter activity | 3.12E-02 |
| 50 | GO:0008194: UDP-glycosyltransferase activity | 3.44E-02 |
| 51 | GO:0008168: methyltransferase activity | 4.21E-02 |
| 52 | GO:0016788: hydrolase activity, acting on ester bonds | 4.38E-02 |
| 53 | GO:0008233: peptidase activity | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.69E-23 |
| 2 | GO:0009534: chloroplast thylakoid | 3.73E-17 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.31E-14 |
| 4 | GO:0009570: chloroplast stroma | 4.19E-09 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 6.26E-07 |
| 6 | GO:0009941: chloroplast envelope | 8.79E-06 |
| 7 | GO:0009579: thylakoid | 9.96E-06 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.03E-05 |
| 9 | GO:0009515: granal stacked thylakoid | 5.94E-05 |
| 10 | GO:0031977: thylakoid lumen | 7.53E-05 |
| 11 | GO:0009897: external side of plasma membrane | 2.46E-04 |
| 12 | GO:0009501: amyloplast | 1.18E-03 |
| 13 | GO:0032040: small-subunit processome | 2.27E-03 |
| 14 | GO:0009508: plastid chromosome | 2.47E-03 |
| 15 | GO:0010287: plastoglobule | 2.62E-03 |
| 16 | GO:0042651: thylakoid membrane | 3.57E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 3.57E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 5.89E-03 |
| 19 | GO:0031969: chloroplast membrane | 7.26E-03 |
| 20 | GO:0009295: nucleoid | 7.35E-03 |
| 21 | GO:0030529: intracellular ribonucleoprotein complex | 7.97E-03 |
| 22 | GO:0043231: intracellular membrane-bounded organelle | 1.18E-02 |
| 23 | GO:0009706: chloroplast inner membrane | 2.15E-02 |
| 24 | GO:0005840: ribosome | 4.05E-02 |