Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G20960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
5GO:0043269: regulation of ion transport0.00E+00
6GO:0015690: aluminum cation transport0.00E+00
7GO:0033587: shikimate biosynthetic process0.00E+00
8GO:0051238: sequestering of metal ion0.00E+00
9GO:0046865: terpenoid transport0.00E+00
10GO:0009617: response to bacterium1.53E-10
11GO:0042742: defense response to bacterium6.71E-10
12GO:0071456: cellular response to hypoxia3.33E-09
13GO:0006468: protein phosphorylation3.65E-07
14GO:0000162: tryptophan biosynthetic process1.31E-06
15GO:0010120: camalexin biosynthetic process1.88E-06
16GO:0050832: defense response to fungus2.80E-06
17GO:0009627: systemic acquired resistance4.57E-06
18GO:0006032: chitin catabolic process6.43E-06
19GO:0009817: defense response to fungus, incompatible interaction7.32E-06
20GO:0009682: induced systemic resistance8.99E-06
21GO:0009407: toxin catabolic process9.77E-06
22GO:0010150: leaf senescence1.49E-05
23GO:0002237: response to molecule of bacterial origin2.13E-05
24GO:0051707: response to other organism2.98E-05
25GO:0009636: response to toxic substance4.07E-05
26GO:0006952: defense response4.66E-05
27GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway5.89E-05
28GO:0016998: cell wall macromolecule catabolic process6.21E-05
29GO:0010112: regulation of systemic acquired resistance9.62E-05
30GO:0019438: aromatic compound biosynthetic process1.23E-04
31GO:0009620: response to fungus1.25E-04
32GO:0000272: polysaccharide catabolic process1.97E-04
33GO:0055114: oxidation-reduction process1.98E-04
34GO:0002229: defense response to oomycetes2.28E-04
35GO:0010252: auxin homeostasis3.16E-04
36GO:0009697: salicylic acid biosynthetic process3.17E-04
37GO:0006979: response to oxidative stress3.98E-04
38GO:0002238: response to molecule of fungal origin4.43E-04
39GO:0046686: response to cadmium ion5.75E-04
40GO:0080120: CAAX-box protein maturation6.45E-04
41GO:0071586: CAAX-box protein processing6.45E-04
42GO:0009623: response to parasitic fungus6.45E-04
43GO:0015760: glucose-6-phosphate transport6.45E-04
44GO:0051245: negative regulation of cellular defense response6.45E-04
45GO:1990641: response to iron ion starvation6.45E-04
46GO:0099132: ATP hydrolysis coupled cation transmembrane transport6.45E-04
47GO:0010941: regulation of cell death6.45E-04
48GO:0010726: positive regulation of hydrogen peroxide metabolic process6.45E-04
49GO:1901183: positive regulation of camalexin biosynthetic process6.45E-04
50GO:0009700: indole phytoalexin biosynthetic process6.45E-04
51GO:0032491: detection of molecule of fungal origin6.45E-04
52GO:0010230: alternative respiration6.45E-04
53GO:0042759: long-chain fatty acid biosynthetic process6.45E-04
54GO:0009626: plant-type hypersensitive response6.52E-04
55GO:0030091: protein repair9.32E-04
56GO:0010204: defense response signaling pathway, resistance gene-independent1.13E-03
57GO:0090333: regulation of stomatal closure1.36E-03
58GO:0048544: recognition of pollen1.38E-03
59GO:0048826: cotyledon morphogenesis1.39E-03
60GO:0048569: post-embryonic animal organ development1.39E-03
61GO:0090057: root radial pattern formation1.39E-03
62GO:0009866: induced systemic resistance, ethylene mediated signaling pathway1.39E-03
63GO:0002215: defense response to nematode1.39E-03
64GO:0006101: citrate metabolic process1.39E-03
65GO:0043066: negative regulation of apoptotic process1.39E-03
66GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine1.39E-03
67GO:0002240: response to molecule of oomycetes origin1.39E-03
68GO:0044419: interspecies interaction between organisms1.39E-03
69GO:0015712: hexose phosphate transport1.39E-03
70GO:0019441: tryptophan catabolic process to kynurenine1.39E-03
71GO:0060919: auxin influx1.39E-03
72GO:0006855: drug transmembrane transport1.71E-03
73GO:0009630: gravitropism1.80E-03
74GO:0043069: negative regulation of programmed cell death1.88E-03
75GO:0080167: response to karrikin1.90E-03
76GO:0052544: defense response by callose deposition in cell wall2.17E-03
77GO:0042256: mature ribosome assembly2.29E-03
78GO:0010338: leaf formation2.29E-03
79GO:0010272: response to silver ion2.29E-03
80GO:0015692: lead ion transport2.29E-03
81GO:0015714: phosphoenolpyruvate transport2.29E-03
82GO:0048281: inflorescence morphogenesis2.29E-03
83GO:0080168: abscisic acid transport2.29E-03
84GO:0071367: cellular response to brassinosteroid stimulus2.29E-03
85GO:1902626: assembly of large subunit precursor of preribosome2.29E-03
86GO:0080055: low-affinity nitrate transport2.29E-03
87GO:0035436: triose phosphate transmembrane transport2.29E-03
88GO:0051176: positive regulation of sulfur metabolic process2.29E-03
89GO:0002213: defense response to insect2.49E-03
90GO:0007166: cell surface receptor signaling pathway2.70E-03
91GO:0010116: positive regulation of abscisic acid biosynthetic process3.33E-03
92GO:0048194: Golgi vesicle budding3.33E-03
93GO:0070301: cellular response to hydrogen peroxide3.33E-03
94GO:0006612: protein targeting to membrane3.33E-03
95GO:0010104: regulation of ethylene-activated signaling pathway3.33E-03
96GO:0001676: long-chain fatty acid metabolic process3.33E-03
97GO:0046513: ceramide biosynthetic process3.33E-03
98GO:0042343: indole glucosinolate metabolic process3.60E-03
99GO:0070588: calcium ion transmembrane transport3.60E-03
100GO:0008219: cell death3.74E-03
101GO:0032259: methylation3.79E-03
102GO:0009751: response to salicylic acid4.01E-03
103GO:1901141: regulation of lignin biosynthetic process4.49E-03
104GO:0010109: regulation of photosynthesis4.49E-03
105GO:0000460: maturation of 5.8S rRNA4.49E-03
106GO:1901002: positive regulation of response to salt stress4.49E-03
107GO:0010107: potassium ion import4.49E-03
108GO:0006536: glutamate metabolic process4.49E-03
109GO:0010363: regulation of plant-type hypersensitive response4.49E-03
110GO:0010600: regulation of auxin biosynthetic process4.49E-03
111GO:0015713: phosphoglycerate transport4.49E-03
112GO:0080142: regulation of salicylic acid biosynthetic process4.49E-03
113GO:0045087: innate immune response5.07E-03
114GO:0006097: glyoxylate cycle5.77E-03
115GO:0007029: endoplasmic reticulum organization5.77E-03
116GO:0000304: response to singlet oxygen5.77E-03
117GO:0034052: positive regulation of plant-type hypersensitive response5.77E-03
118GO:0006564: L-serine biosynthetic process5.77E-03
119GO:0009814: defense response, incompatible interaction5.94E-03
120GO:0016226: iron-sulfur cluster assembly5.94E-03
121GO:0006631: fatty acid metabolic process6.32E-03
122GO:0071215: cellular response to abscisic acid stimulus6.48E-03
123GO:0071369: cellular response to ethylene stimulus6.48E-03
124GO:0010200: response to chitin7.14E-03
125GO:0015691: cadmium ion transport7.17E-03
126GO:0010256: endomembrane system organization7.17E-03
127GO:0000470: maturation of LSU-rRNA7.17E-03
128GO:0060918: auxin transport7.17E-03
129GO:0010358: leaf shaping7.17E-03
130GO:1900425: negative regulation of defense response to bacterium7.17E-03
131GO:0010315: auxin efflux7.17E-03
132GO:0009117: nucleotide metabolic process7.17E-03
133GO:0009643: photosynthetic acclimation7.17E-03
134GO:0009759: indole glucosinolate biosynthetic process7.17E-03
135GO:0006561: proline biosynthetic process7.17E-03
136GO:0010942: positive regulation of cell death7.17E-03
137GO:0070417: cellular response to cold7.66E-03
138GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response8.67E-03
139GO:0045926: negative regulation of growth8.67E-03
140GO:0000054: ribosomal subunit export from nucleus8.67E-03
141GO:0009733: response to auxin1.01E-02
142GO:0009851: auxin biosynthetic process1.03E-02
143GO:0080027: response to herbivore1.03E-02
144GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway1.03E-02
145GO:1900056: negative regulation of leaf senescence1.03E-02
146GO:0006813: potassium ion transport1.03E-02
147GO:0050829: defense response to Gram-negative bacterium1.03E-02
148GO:1902074: response to salt1.03E-02
149GO:0006869: lipid transport1.08E-02
150GO:0010583: response to cyclopentenone1.18E-02
151GO:0006102: isocitrate metabolic process1.20E-02
152GO:0009061: anaerobic respiration1.20E-02
153GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.20E-02
154GO:0009819: drought recovery1.20E-02
155GO:2000070: regulation of response to water deprivation1.20E-02
156GO:0009651: response to salt stress1.34E-02
157GO:0043562: cellular response to nitrogen levels1.38E-02
158GO:0009808: lignin metabolic process1.38E-02
159GO:0009699: phenylpropanoid biosynthetic process1.38E-02
160GO:0006075: (1->3)-beta-D-glucan biosynthetic process1.38E-02
161GO:0001558: regulation of cell growth1.38E-02
162GO:0051607: defense response to virus1.52E-02
163GO:0007338: single fertilization1.57E-02
164GO:0006098: pentose-phosphate shunt1.57E-02
165GO:0034765: regulation of ion transmembrane transport1.57E-02
166GO:0009615: response to virus1.61E-02
167GO:0009607: response to biotic stimulus1.70E-02
168GO:0009816: defense response to bacterium, incompatible interaction1.70E-02
169GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.76E-02
170GO:0008202: steroid metabolic process1.76E-02
171GO:0010162: seed dormancy process1.97E-02
172GO:0007064: mitotic sister chromatid cohesion1.97E-02
173GO:0009870: defense response signaling pathway, resistance gene-dependent1.97E-02
174GO:0009688: abscisic acid biosynthetic process1.97E-02
175GO:0030148: sphingolipid biosynthetic process2.18E-02
176GO:0009089: lysine biosynthetic process via diaminopimelate2.18E-02
177GO:0048229: gametophyte development2.18E-02
178GO:0048767: root hair elongation2.22E-02
179GO:0009734: auxin-activated signaling pathway2.38E-02
180GO:0071365: cellular response to auxin stimulus2.41E-02
181GO:0000266: mitochondrial fission2.41E-02
182GO:0012501: programmed cell death2.41E-02
183GO:0015706: nitrate transport2.41E-02
184GO:0010229: inflorescence development2.64E-02
185GO:0055046: microgametogenesis2.64E-02
186GO:0009718: anthocyanin-containing compound biosynthetic process2.64E-02
187GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process2.64E-02
188GO:0006099: tricarboxylic acid cycle2.80E-02
189GO:0010540: basipetal auxin transport2.87E-02
190GO:0010143: cutin biosynthetic process2.87E-02
191GO:0006541: glutamine metabolic process2.87E-02
192GO:0010053: root epidermal cell differentiation3.12E-02
193GO:0009225: nucleotide-sugar metabolic process3.12E-02
194GO:0010025: wax biosynthetic process3.37E-02
195GO:0009926: auxin polar transport3.45E-02
196GO:0005992: trehalose biosynthetic process3.63E-02
197GO:0080147: root hair cell development3.63E-02
198GO:0009863: salicylic acid mediated signaling pathway3.63E-02
199GO:2000377: regulation of reactive oxygen species metabolic process3.63E-02
200GO:0051302: regulation of cell division3.89E-02
201GO:0006874: cellular calcium ion homeostasis3.89E-02
202GO:0010431: seed maturation4.16E-02
203GO:0031408: oxylipin biosynthetic process4.16E-02
204GO:0048278: vesicle docking4.16E-02
205GO:0009737: response to abscisic acid4.24E-02
206GO:0031348: negative regulation of defense response4.44E-02
207GO:0009414: response to water deprivation4.54E-02
208GO:0005975: carbohydrate metabolic process4.57E-02
209GO:0009809: lignin biosynthetic process4.63E-02
210GO:0009625: response to insect4.72E-02
211GO:0010227: floral organ abscission4.72E-02
212GO:0006012: galactose metabolic process4.72E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0008843: endochitinase activity0.00E+00
4GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
5GO:0035885: exochitinase activity0.00E+00
6GO:0016301: kinase activity1.13E-07
7GO:0004674: protein serine/threonine kinase activity4.38E-07
8GO:0008061: chitin binding9.57E-07
9GO:0005524: ATP binding1.86E-06
10GO:0004364: glutathione transferase activity2.11E-06
11GO:0010279: indole-3-acetic acid amido synthetase activity3.33E-06
12GO:0008171: O-methyltransferase activity6.43E-06
13GO:0004049: anthranilate synthase activity5.89E-05
14GO:0030246: carbohydrate binding9.50E-05
15GO:0004568: chitinase activity1.58E-04
16GO:0004834: tryptophan synthase activity2.10E-04
17GO:0005516: calmodulin binding4.71E-04
18GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.87E-04
19GO:0102391: decanoate--CoA ligase activity5.87E-04
20GO:0004012: phospholipid-translocating ATPase activity5.87E-04
21GO:0008757: S-adenosylmethionine-dependent methyltransferase activity5.91E-04
22GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity6.45E-04
23GO:2001227: quercitrin binding6.45E-04
24GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity6.45E-04
25GO:0004425: indole-3-glycerol-phosphate synthase activity6.45E-04
26GO:0033984: indole-3-glycerol-phosphate lyase activity6.45E-04
27GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity6.45E-04
28GO:2001147: camalexin binding6.45E-04
29GO:0010285: L,L-diaminopimelate aminotransferase activity6.45E-04
30GO:0031957: very long-chain fatty acid-CoA ligase activity6.45E-04
31GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity6.45E-04
32GO:0004467: long-chain fatty acid-CoA ligase activity7.50E-04
33GO:0043295: glutathione binding7.50E-04
34GO:0016614: oxidoreductase activity, acting on CH-OH group of donors8.00E-04
35GO:0042626: ATPase activity, coupled to transmembrane movement of substances8.37E-04
36GO:0050291: sphingosine N-acyltransferase activity1.39E-03
37GO:0003994: aconitate hydratase activity1.39E-03
38GO:0015152: glucose-6-phosphate transmembrane transporter activity1.39E-03
39GO:0045140: inositol phosphoceramide synthase activity1.39E-03
40GO:0032934: sterol binding1.39E-03
41GO:0004061: arylformamidase activity1.39E-03
42GO:0004385: guanylate kinase activity1.39E-03
43GO:0020037: heme binding1.53E-03
44GO:0050660: flavin adenine dinucleotide binding1.65E-03
45GO:0004713: protein tyrosine kinase activity1.88E-03
46GO:0008559: xenobiotic-transporting ATPase activity2.17E-03
47GO:0016595: glutamate binding2.29E-03
48GO:0071917: triose-phosphate transmembrane transporter activity2.29E-03
49GO:0080054: low-affinity nitrate transmembrane transporter activity2.29E-03
50GO:0004324: ferredoxin-NADP+ reductase activity2.29E-03
51GO:0003955: NAD(P)H dehydrogenase (quinone) activity2.29E-03
52GO:0004383: guanylate cyclase activity2.29E-03
53GO:0016805: dipeptidase activity2.29E-03
54GO:0005388: calcium-transporting ATPase activity2.84E-03
55GO:0004022: alcohol dehydrogenase (NAD) activity2.84E-03
56GO:0010329: auxin efflux transmembrane transporter activity2.84E-03
57GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.84E-03
58GO:0004672: protein kinase activity3.15E-03
59GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.17E-03
60GO:0043023: ribosomal large subunit binding3.33E-03
61GO:0004351: glutamate decarboxylase activity3.33E-03
62GO:0008276: protein methyltransferase activity3.33E-03
63GO:0016656: monodehydroascorbate reductase (NADH) activity3.33E-03
64GO:0015238: drug transmembrane transporter activity3.98E-03
65GO:0015120: phosphoglycerate transmembrane transporter activity4.49E-03
66GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor4.49E-03
67GO:0010328: auxin influx transmembrane transporter activity4.49E-03
68GO:0050378: UDP-glucuronate 4-epimerase activity4.49E-03
69GO:0009055: electron carrier activity4.74E-03
70GO:0045431: flavonol synthase activity5.77E-03
71GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen5.77E-03
72GO:0005496: steroid binding5.77E-03
73GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity5.77E-03
74GO:0004029: aldehyde dehydrogenase (NAD) activity7.17E-03
75GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.64E-03
76GO:0015297: antiporter activity7.92E-03
77GO:0008113: peptide-methionine (S)-S-oxide reductase activity8.67E-03
78GO:0005242: inward rectifier potassium channel activity8.67E-03
79GO:0051020: GTPase binding8.67E-03
80GO:0004656: procollagen-proline 4-dioxygenase activity8.67E-03
81GO:0005507: copper ion binding9.36E-03
82GO:0004143: diacylglycerol kinase activity1.03E-02
83GO:0008235: metalloexopeptidase activity1.03E-02
84GO:0102425: myricetin 3-O-glucosyltransferase activity1.03E-02
85GO:0102360: daphnetin 3-O-glucosyltransferase activity1.03E-02
86GO:0008143: poly(A) binding1.03E-02
87GO:0005085: guanyl-nucleotide exchange factor activity1.03E-02
88GO:0047893: flavonol 3-O-glucosyltransferase activity1.20E-02
89GO:0004034: aldose 1-epimerase activity1.20E-02
90GO:0043022: ribosome binding1.20E-02
91GO:0004033: aldo-keto reductase (NADP) activity1.20E-02
92GO:0008142: oxysterol binding1.38E-02
93GO:0003843: 1,3-beta-D-glucan synthase activity1.38E-02
94GO:0008168: methyltransferase activity1.56E-02
95GO:0071949: FAD binding1.57E-02
96GO:0051213: dioxygenase activity1.61E-02
97GO:0016746: transferase activity, transferring acyl groups1.68E-02
98GO:0030955: potassium ion binding1.76E-02
99GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.76E-02
100GO:0004743: pyruvate kinase activity1.76E-02
101GO:0030247: polysaccharide binding1.90E-02
102GO:0005506: iron ion binding1.91E-02
103GO:0008047: enzyme activator activity1.97E-02
104GO:0004177: aminopeptidase activity2.18E-02
105GO:0030145: manganese ion binding2.44E-02
106GO:0019825: oxygen binding2.49E-02
107GO:0005315: inorganic phosphate transmembrane transporter activity2.64E-02
108GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.67E-02
109GO:0031624: ubiquitin conjugating enzyme binding2.87E-02
110GO:0004175: endopeptidase activity2.87E-02
111GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.87E-02
112GO:0051539: 4 iron, 4 sulfur cluster binding3.05E-02
113GO:0004867: serine-type endopeptidase inhibitor activity3.12E-02
114GO:0004970: ionotropic glutamate receptor activity3.12E-02
115GO:0005217: intracellular ligand-gated ion channel activity3.12E-02
116GO:0016491: oxidoreductase activity3.45E-02
117GO:0051536: iron-sulfur cluster binding3.63E-02
118GO:0031418: L-ascorbic acid binding3.63E-02
119GO:0008134: transcription factor binding3.63E-02
120GO:0015079: potassium ion transmembrane transporter activity3.89E-02
121GO:0035251: UDP-glucosyltransferase activity4.16E-02
122GO:0004540: ribonuclease activity4.16E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.77E-14
2GO:0016021: integral component of membrane1.13E-10
3GO:0005783: endoplasmic reticulum7.19E-06
4GO:0005829: cytosol3.92E-04
5GO:0045252: oxoglutarate dehydrogenase complex6.45E-04
6GO:0005950: anthranilate synthase complex1.39E-03
7GO:0005901: caveola1.39E-03
8GO:0009925: basal plasma membrane1.39E-03
9GO:0005618: cell wall2.18E-03
10GO:0005853: eukaryotic translation elongation factor 1 complex2.29E-03
11GO:0045177: apical part of cell3.33E-03
12GO:0000325: plant-type vacuole4.51E-03
13GO:0005576: extracellular region6.11E-03
14GO:0032588: trans-Golgi network membrane7.17E-03
15GO:0030687: preribosome, large subunit precursor1.03E-02
16GO:0000148: 1,3-beta-D-glucan synthase complex1.38E-02
17GO:0005774: vacuolar membrane1.46E-02
18GO:0010494: cytoplasmic stress granule1.57E-02
19GO:0009506: plasmodesma1.88E-02
20GO:0005773: vacuole2.37E-02
21GO:0016602: CCAAT-binding factor complex2.64E-02
22GO:0030176: integral component of endoplasmic reticulum membrane3.12E-02
23GO:0016020: membrane3.13E-02
24GO:0009505: plant-type cell wall3.13E-02
25GO:0031966: mitochondrial membrane4.32E-02
26GO:0046658: anchored component of plasma membrane4.55E-02
27GO:0043231: intracellular membrane-bounded organelle4.63E-02
Gene type



Gene DE type