Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G20230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
5GO:0030149: sphingolipid catabolic process0.00E+00
6GO:0051238: sequestering of metal ion0.00E+00
7GO:0009617: response to bacterium4.25E-12
8GO:0042742: defense response to bacterium4.10E-09
9GO:0010120: camalexin biosynthetic process5.49E-09
10GO:0071456: cellular response to hypoxia2.11E-08
11GO:0006468: protein phosphorylation5.77E-07
12GO:0009682: induced systemic resistance2.63E-06
13GO:0051707: response to other organism6.01E-06
14GO:0070588: calcium ion transmembrane transport8.39E-06
15GO:0010150: leaf senescence1.96E-05
16GO:0016998: cell wall macromolecule catabolic process2.04E-05
17GO:0009407: toxin catabolic process3.01E-05
18GO:0010112: regulation of systemic acquired resistance4.01E-05
19GO:0006032: chitin catabolic process6.83E-05
20GO:0043069: negative regulation of programmed cell death6.83E-05
21GO:0052544: defense response by callose deposition in cell wall8.61E-05
22GO:0000272: polysaccharide catabolic process8.61E-05
23GO:0009636: response to toxic substance9.57E-05
24GO:0055114: oxidation-reduction process1.64E-04
25GO:0009697: salicylic acid biosynthetic process1.74E-04
26GO:0009627: systemic acquired resistance1.98E-04
27GO:0006979: response to oxidative stress2.04E-04
28GO:0000162: tryptophan biosynthetic process2.14E-04
29GO:0009626: plant-type hypersensitive response2.25E-04
30GO:0046686: response to cadmium ion2.48E-04
31GO:0009759: indole glucosinolate biosynthetic process2.48E-04
32GO:0050832: defense response to fungus2.59E-04
33GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.33E-04
34GO:0006952: defense response3.87E-04
35GO:0009651: response to salt stress4.02E-04
36GO:0006099: tricarboxylic acid cycle4.09E-04
37GO:0009625: response to insect4.10E-04
38GO:0080120: CAAX-box protein maturation4.43E-04
39GO:0071586: CAAX-box protein processing4.43E-04
40GO:0015760: glucose-6-phosphate transport4.43E-04
41GO:0051245: negative regulation of cellular defense response4.43E-04
42GO:1990641: response to iron ion starvation4.43E-04
43GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.43E-04
44GO:0010726: positive regulation of hydrogen peroxide metabolic process4.43E-04
45GO:0055081: anion homeostasis4.43E-04
46GO:0009609: response to symbiotic bacterium4.43E-04
47GO:0033306: phytol metabolic process4.43E-04
48GO:1901183: positive regulation of camalexin biosynthetic process4.43E-04
49GO:0009700: indole phytoalexin biosynthetic process4.43E-04
50GO:0042759: long-chain fatty acid biosynthetic process4.43E-04
51GO:0010230: alternative respiration4.43E-04
52GO:0006102: isocitrate metabolic process5.37E-04
53GO:0030091: protein repair5.37E-04
54GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.37E-04
55GO:0080167: response to karrikin6.05E-04
56GO:0009414: response to water deprivation6.16E-04
57GO:0009737: response to abscisic acid6.65E-04
58GO:0048544: recognition of pollen6.78E-04
59GO:0015914: phospholipid transport9.56E-04
60GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.56E-04
61GO:0090057: root radial pattern formation9.56E-04
62GO:0006101: citrate metabolic process9.56E-04
63GO:0019752: carboxylic acid metabolic process9.56E-04
64GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.56E-04
65GO:0044419: interspecies interaction between organisms9.56E-04
66GO:0031349: positive regulation of defense response9.56E-04
67GO:0019441: tryptophan catabolic process to kynurenine9.56E-04
68GO:0015712: hexose phosphate transport9.56E-04
69GO:0097054: L-glutamate biosynthetic process9.56E-04
70GO:0060919: auxin influx9.56E-04
71GO:0007166: cell surface receptor signaling pathway9.79E-04
72GO:0010252: auxin homeostasis1.03E-03
73GO:0009688: abscisic acid biosynthetic process1.07E-03
74GO:0002213: defense response to insect1.41E-03
75GO:0010272: response to silver ion1.56E-03
76GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.56E-03
77GO:0015714: phosphoenolpyruvate transport1.56E-03
78GO:0048281: inflorescence morphogenesis1.56E-03
79GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening1.56E-03
80GO:0010498: proteasomal protein catabolic process1.56E-03
81GO:0080055: low-affinity nitrate transport1.56E-03
82GO:0035436: triose phosphate transmembrane transport1.56E-03
83GO:0008219: cell death1.80E-03
84GO:0009817: defense response to fungus, incompatible interaction1.80E-03
85GO:0046836: glycolipid transport2.25E-03
86GO:0010116: positive regulation of abscisic acid biosynthetic process2.25E-03
87GO:0019438: aromatic compound biosynthetic process2.25E-03
88GO:0048194: Golgi vesicle budding2.25E-03
89GO:0006537: glutamate biosynthetic process2.25E-03
90GO:0043207: response to external biotic stimulus2.25E-03
91GO:0006612: protein targeting to membrane2.25E-03
92GO:0010255: glucose mediated signaling pathway2.25E-03
93GO:0001676: long-chain fatty acid metabolic process2.25E-03
94GO:0046513: ceramide biosynthetic process2.25E-03
95GO:0034976: response to endoplasmic reticulum stress2.27E-03
96GO:0080147: root hair cell development2.52E-03
97GO:0010200: response to chitin2.59E-03
98GO:0010109: regulation of photosynthesis3.03E-03
99GO:0019676: ammonia assimilation cycle3.03E-03
100GO:0046345: abscisic acid catabolic process3.03E-03
101GO:0010107: potassium ion import3.03E-03
102GO:0010363: regulation of plant-type hypersensitive response3.03E-03
103GO:0010508: positive regulation of autophagy3.03E-03
104GO:0080142: regulation of salicylic acid biosynthetic process3.03E-03
105GO:0015713: phosphoglycerate transport3.03E-03
106GO:0006631: fatty acid metabolic process3.04E-03
107GO:0006097: glyoxylate cycle3.88E-03
108GO:0000304: response to singlet oxygen3.88E-03
109GO:0034052: positive regulation of plant-type hypersensitive response3.88E-03
110GO:0032259: methylation4.49E-03
111GO:0042391: regulation of membrane potential4.65E-03
112GO:0009751: response to salicylic acid4.72E-03
113GO:0015691: cadmium ion transport4.80E-03
114GO:0010256: endomembrane system organization4.80E-03
115GO:0060918: auxin transport4.80E-03
116GO:0010315: auxin efflux4.80E-03
117GO:0002238: response to molecule of fungal origin4.80E-03
118GO:0009643: photosynthetic acclimation4.80E-03
119GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly4.80E-03
120GO:0006561: proline biosynthetic process4.80E-03
121GO:0010942: positive regulation of cell death4.80E-03
122GO:0009851: auxin biosynthetic process5.79E-03
123GO:0071470: cellular response to osmotic stress5.79E-03
124GO:0000302: response to reactive oxygen species6.19E-03
125GO:0009630: gravitropism6.62E-03
126GO:0009610: response to symbiotic fungus6.85E-03
127GO:0043090: amino acid import6.85E-03
128GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway6.85E-03
129GO:1900056: negative regulation of leaf senescence6.85E-03
130GO:0070370: cellular heat acclimation6.85E-03
131GO:1902074: response to salt6.85E-03
132GO:0009620: response to fungus6.89E-03
133GO:0031540: regulation of anthocyanin biosynthetic process7.97E-03
134GO:0009061: anaerobic respiration7.97E-03
135GO:0010928: regulation of auxin mediated signaling pathway7.97E-03
136GO:0009787: regulation of abscisic acid-activated signaling pathway7.97E-03
137GO:0009819: drought recovery7.97E-03
138GO:0009615: response to virus8.99E-03
139GO:0043562: cellular response to nitrogen levels9.15E-03
140GO:0009808: lignin metabolic process9.15E-03
141GO:0009699: phenylpropanoid biosynthetic process9.15E-03
142GO:0006075: (1->3)-beta-D-glucan biosynthetic process9.15E-03
143GO:0010262: somatic embryogenesis9.15E-03
144GO:0010204: defense response signaling pathway, resistance gene-independent9.15E-03
145GO:0009607: response to biotic stimulus9.51E-03
146GO:0009816: defense response to bacterium, incompatible interaction9.51E-03
147GO:0034765: regulation of ion transmembrane transport1.04E-02
148GO:0090333: regulation of stomatal closure1.04E-02
149GO:0019432: triglyceride biosynthetic process1.04E-02
150GO:0010205: photoinhibition1.17E-02
151GO:0043067: regulation of programmed cell death1.17E-02
152GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.17E-02
153GO:0048767: root hair elongation1.24E-02
154GO:0045454: cell redox homeostasis1.25E-02
155GO:0010162: seed dormancy process1.30E-02
156GO:0009870: defense response signaling pathway, resistance gene-dependent1.30E-02
157GO:0009698: phenylpropanoid metabolic process1.45E-02
158GO:0009089: lysine biosynthetic process via diaminopimelate1.45E-02
159GO:0045087: innate immune response1.49E-02
160GO:0012501: programmed cell death1.59E-02
161GO:0015706: nitrate transport1.59E-02
162GO:0055046: microgametogenesis1.74E-02
163GO:0009718: anthocyanin-containing compound biosynthetic process1.74E-02
164GO:2000028: regulation of photoperiodism, flowering1.74E-02
165GO:0010540: basipetal auxin transport1.90E-02
166GO:0034605: cellular response to heat1.90E-02
167GO:0010143: cutin biosynthetic process1.90E-02
168GO:0006541: glutamine metabolic process1.90E-02
169GO:0002237: response to molecule of bacterial origin1.90E-02
170GO:0009733: response to auxin2.01E-02
171GO:0010053: root epidermal cell differentiation2.06E-02
172GO:0042343: indole glucosinolate metabolic process2.06E-02
173GO:0010025: wax biosynthetic process2.23E-02
174GO:0006855: drug transmembrane transport2.25E-02
175GO:0005992: trehalose biosynthetic process2.40E-02
176GO:0009863: salicylic acid mediated signaling pathway2.40E-02
177GO:2000377: regulation of reactive oxygen species metabolic process2.40E-02
178GO:0009846: pollen germination2.43E-02
179GO:0010431: seed maturation2.75E-02
180GO:0048278: vesicle docking2.75E-02
181GO:0031348: negative regulation of defense response2.93E-02
182GO:0009814: defense response, incompatible interaction2.93E-02
183GO:0030433: ubiquitin-dependent ERAD pathway2.93E-02
184GO:0006970: response to osmotic stress2.96E-02
185GO:0010227: floral organ abscission3.12E-02
186GO:0006012: galactose metabolic process3.12E-02
187GO:0009723: response to ethylene3.24E-02
188GO:0010584: pollen exine formation3.31E-02
189GO:0010091: trichome branching3.31E-02
190GO:0009561: megagametogenesis3.31E-02
191GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.68E-02
192GO:0042631: cellular response to water deprivation3.71E-02
193GO:0009624: response to nematode3.71E-02
194GO:0008360: regulation of cell shape3.91E-02
195GO:0009958: positive gravitropism3.91E-02
196GO:0006520: cellular amino acid metabolic process3.91E-02
197GO:0010154: fruit development3.91E-02
198GO:0010197: polar nucleus fusion3.91E-02
199GO:0061025: membrane fusion4.12E-02
200GO:0042752: regulation of circadian rhythm4.12E-02
201GO:0009646: response to absence of light4.12E-02
202GO:0009749: response to glucose4.33E-02
203GO:0002229: defense response to oomycetes4.54E-02
204GO:0006635: fatty acid beta-oxidation4.54E-02
205GO:0010193: response to ozone4.54E-02
206GO:0009845: seed germination5.00E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
3GO:0015930: glutamate synthase activity0.00E+00
4GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
5GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
6GO:0004674: protein serine/threonine kinase activity6.83E-08
7GO:0005524: ATP binding1.83E-07
8GO:0016301: kinase activity5.00E-07
9GO:0010279: indole-3-acetic acid amido synthetase activity1.21E-06
10GO:0005516: calmodulin binding2.33E-06
11GO:0005388: calcium-transporting ATPase activity4.90E-06
12GO:0004364: glutathione transferase activity5.33E-06
13GO:0102391: decanoate--CoA ligase activity8.79E-06
14GO:0004467: long-chain fatty acid-CoA ligase activity1.39E-05
15GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.37E-05
16GO:0004568: chitinase activity6.83E-05
17GO:0008171: O-methyltransferase activity6.83E-05
18GO:0050660: flavin adenine dinucleotide binding1.06E-04
19GO:0008061: chitin binding1.83E-04
20GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.33E-04
21GO:0004656: procollagen-proline 4-dioxygenase activity3.33E-04
22GO:0043295: glutathione binding4.30E-04
23GO:2001227: quercitrin binding4.43E-04
24GO:0004425: indole-3-glycerol-phosphate synthase activity4.43E-04
25GO:0033984: indole-3-glycerol-phosphate lyase activity4.43E-04
26GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity4.43E-04
27GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity4.43E-04
28GO:2001147: camalexin binding4.43E-04
29GO:0010285: L,L-diaminopimelate aminotransferase activity4.43E-04
30GO:0016041: glutamate synthase (ferredoxin) activity4.43E-04
31GO:0031957: very long-chain fatty acid-CoA ligase activity4.43E-04
32GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.43E-04
33GO:0005507: copper ion binding8.45E-04
34GO:0050291: sphingosine N-acyltransferase activity9.56E-04
35GO:0003958: NADPH-hemoprotein reductase activity9.56E-04
36GO:0003994: aconitate hydratase activity9.56E-04
37GO:0015152: glucose-6-phosphate transmembrane transporter activity9.56E-04
38GO:0004061: arylformamidase activity9.56E-04
39GO:0004775: succinate-CoA ligase (ADP-forming) activity9.56E-04
40GO:0004776: succinate-CoA ligase (GDP-forming) activity9.56E-04
41GO:0048531: beta-1,3-galactosyltransferase activity9.56E-04
42GO:0008559: xenobiotic-transporting ATPase activity1.24E-03
43GO:0009055: electron carrier activity1.50E-03
44GO:0071917: triose-phosphate transmembrane transporter activity1.56E-03
45GO:0004049: anthranilate synthase activity1.56E-03
46GO:0080054: low-affinity nitrate transmembrane transporter activity1.56E-03
47GO:0004324: ferredoxin-NADP+ reductase activity1.56E-03
48GO:0004148: dihydrolipoyl dehydrogenase activity1.56E-03
49GO:0004383: guanylate cyclase activity1.56E-03
50GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.69E-03
51GO:0004190: aspartic-type endopeptidase activity2.03E-03
52GO:0050897: cobalt ion binding2.17E-03
53GO:0017089: glycolipid transporter activity2.25E-03
54GO:0008276: protein methyltransferase activity2.25E-03
55GO:0035529: NADH pyrophosphatase activity2.25E-03
56GO:0004449: isocitrate dehydrogenase (NAD+) activity2.25E-03
57GO:0030246: carbohydrate binding2.35E-03
58GO:0015120: phosphoglycerate transmembrane transporter activity3.03E-03
59GO:0004834: tryptophan synthase activity3.03E-03
60GO:0051861: glycolipid binding3.03E-03
61GO:0010328: auxin influx transmembrane transporter activity3.03E-03
62GO:0004031: aldehyde oxidase activity3.03E-03
63GO:0050302: indole-3-acetaldehyde oxidase activity3.03E-03
64GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.17E-03
65GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.83E-03
66GO:0045431: flavonol synthase activity3.88E-03
67GO:0010294: abscisic acid glucosyltransferase activity3.88E-03
68GO:0047631: ADP-ribose diphosphatase activity3.88E-03
69GO:0051538: 3 iron, 4 sulfur cluster binding3.88E-03
70GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity3.88E-03
71GO:0003756: protein disulfide isomerase activity3.97E-03
72GO:0030551: cyclic nucleotide binding4.65E-03
73GO:0030976: thiamine pyrophosphate binding4.80E-03
74GO:0000210: NAD+ diphosphatase activity4.80E-03
75GO:0004029: aldehyde dehydrogenase (NAD) activity4.80E-03
76GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity4.80E-03
77GO:0036402: proteasome-activating ATPase activity4.80E-03
78GO:0010181: FMN binding5.39E-03
79GO:0005506: iron ion binding5.54E-03
80GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.79E-03
81GO:0005242: inward rectifier potassium channel activity5.79E-03
82GO:0051920: peroxiredoxin activity5.79E-03
83GO:0004144: diacylglycerol O-acyltransferase activity5.79E-03
84GO:0004012: phospholipid-translocating ATPase activity5.79E-03
85GO:0004143: diacylglycerol kinase activity6.85E-03
86GO:0016831: carboxy-lyase activity6.85E-03
87GO:0102425: myricetin 3-O-glucosyltransferase activity6.85E-03
88GO:0102360: daphnetin 3-O-glucosyltransferase activity6.85E-03
89GO:0016209: antioxidant activity7.97E-03
90GO:0047893: flavonol 3-O-glucosyltransferase activity7.97E-03
91GO:0004034: aldose 1-epimerase activity7.97E-03
92GO:0004033: aldo-keto reductase (NADP) activity7.97E-03
93GO:0016746: transferase activity, transferring acyl groups8.04E-03
94GO:0003843: 1,3-beta-D-glucan synthase activity9.15E-03
95GO:0071949: FAD binding1.04E-02
96GO:0030247: polysaccharide binding1.06E-02
97GO:0030955: potassium ion binding1.17E-02
98GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.17E-02
99GO:0004743: pyruvate kinase activity1.17E-02
100GO:0015238: drug transmembrane transporter activity1.24E-02
101GO:0004713: protein tyrosine kinase activity1.30E-02
102GO:0004129: cytochrome-c oxidase activity1.45E-02
103GO:0015297: antiporter activity1.47E-02
104GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.49E-02
105GO:0005262: calcium channel activity1.74E-02
106GO:0000175: 3'-5'-exoribonuclease activity1.74E-02
107GO:0004022: alcohol dehydrogenase (NAD) activity1.74E-02
108GO:0010329: auxin efflux transmembrane transporter activity1.74E-02
109GO:0005315: inorganic phosphate transmembrane transporter activity1.74E-02
110GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.74E-02
111GO:0004175: endopeptidase activity1.90E-02
112GO:0004535: poly(A)-specific ribonuclease activity1.90E-02
113GO:0030552: cAMP binding2.06E-02
114GO:0004867: serine-type endopeptidase inhibitor activity2.06E-02
115GO:0030553: cGMP binding2.06E-02
116GO:0017025: TBP-class protein binding2.06E-02
117GO:0015293: symporter activity2.17E-02
118GO:0051287: NAD binding2.34E-02
119GO:0031418: L-ascorbic acid binding2.40E-02
120GO:0003954: NADH dehydrogenase activity2.40E-02
121GO:0019825: oxygen binding2.41E-02
122GO:0005216: ion channel activity2.57E-02
123GO:0008168: methyltransferase activity2.57E-02
124GO:0000287: magnesium ion binding2.64E-02
125GO:0016491: oxidoreductase activity2.72E-02
126GO:0008408: 3'-5' exonuclease activity2.75E-02
127GO:0035251: UDP-glucosyltransferase activity2.75E-02
128GO:0004540: ribonuclease activity2.75E-02
129GO:0004499: N,N-dimethylaniline monooxygenase activity3.31E-02
130GO:0080043: quercetin 3-O-glucosyltransferase activity3.39E-02
131GO:0080044: quercetin 7-O-glucosyltransferase activity3.39E-02
132GO:0004497: monooxygenase activity3.53E-02
133GO:0005249: voltage-gated potassium channel activity3.71E-02
134GO:0005509: calcium ion binding3.78E-02
135GO:0016853: isomerase activity4.12E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005886: plasma membrane5.62E-10
3GO:0005783: endoplasmic reticulum2.51E-07
4GO:0016021: integral component of membrane1.21E-04
5GO:0045252: oxoglutarate dehydrogenase complex4.43E-04
6GO:0030014: CCR4-NOT complex4.43E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane9.56E-04
8GO:0005901: caveola9.56E-04
9GO:0005887: integral component of plasma membrane2.40E-03
10GO:0005829: cytosol2.90E-03
11GO:0030660: Golgi-associated vesicle membrane3.03E-03
12GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane3.03E-03
13GO:0005746: mitochondrial respiratory chain3.88E-03
14GO:0043231: intracellular membrane-bounded organelle5.75E-03
15GO:0031597: cytosolic proteasome complex5.79E-03
16GO:0031595: nuclear proteasome complex6.85E-03
17GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane7.97E-03
18GO:0000326: protein storage vacuole9.15E-03
19GO:0000148: 1,3-beta-D-glucan synthase complex9.15E-03
20GO:0016020: membrane9.29E-03
21GO:0005788: endoplasmic reticulum lumen9.51E-03
22GO:0005618: cell wall9.54E-03
23GO:0008540: proteasome regulatory particle, base subcomplex1.17E-02
24GO:0000325: plant-type vacuole1.36E-02
25GO:0005789: endoplasmic reticulum membrane1.42E-02
26GO:0005765: lysosomal membrane1.45E-02
27GO:0048046: apoplast1.74E-02
28GO:0030176: integral component of endoplasmic reticulum membrane2.06E-02
29GO:0031966: mitochondrial membrane2.43E-02
30GO:0005770: late endosome3.91E-02
31GO:0005576: extracellular region3.99E-02
32GO:0009504: cell plate4.33E-02
Gene type



Gene DE type