Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G19960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048358: mucilage pectin biosynthetic process9.64E-06
2GO:0010393: galacturonan metabolic process9.64E-06
3GO:0071217: cellular response to external biotic stimulus2.58E-05
4GO:0046740: transport of virus in host, cell to cell2.58E-05
5GO:0046898: response to cycloheximide2.58E-05
6GO:2001020: regulation of response to DNA damage stimulus2.58E-05
7GO:0010272: response to silver ion4.69E-05
8GO:0006893: Golgi to plasma membrane transport7.16E-05
9GO:0051601: exocyst localization7.16E-05
10GO:0010071: root meristem specification7.16E-05
11GO:0080001: mucilage extrusion from seed coat7.16E-05
12GO:1902183: regulation of shoot apical meristem development1.30E-04
13GO:0010225: response to UV-C1.30E-04
14GO:0048359: mucilage metabolic process involved in seed coat development1.30E-04
15GO:0045040: protein import into mitochondrial outer membrane1.63E-04
16GO:0047484: regulation of response to osmotic stress1.63E-04
17GO:0043248: proteasome assembly1.63E-04
18GO:1901001: negative regulation of response to salt stress1.98E-04
19GO:0009423: chorismate biosynthetic process1.98E-04
20GO:1902074: response to salt2.34E-04
21GO:0045995: regulation of embryonic development2.34E-04
22GO:0010078: maintenance of root meristem identity2.72E-04
23GO:0010492: maintenance of shoot apical meristem identity2.72E-04
24GO:0016559: peroxisome fission2.72E-04
25GO:0006367: transcription initiation from RNA polymerase II promoter3.11E-04
26GO:0006972: hyperosmotic response3.11E-04
27GO:0009827: plant-type cell wall modification3.11E-04
28GO:0060321: acceptance of pollen3.11E-04
29GO:2000024: regulation of leaf development3.51E-04
30GO:0010332: response to gamma radiation3.51E-04
31GO:0010192: mucilage biosynthetic process4.35E-04
32GO:0006325: chromatin organization4.35E-04
33GO:0009073: aromatic amino acid family biosynthetic process4.78E-04
34GO:0000266: mitochondrial fission5.23E-04
35GO:0006626: protein targeting to mitochondrion5.68E-04
36GO:0007031: peroxisome organization6.61E-04
37GO:0009944: polarity specification of adaxial/abaxial axis7.58E-04
38GO:0006406: mRNA export from nucleus7.58E-04
39GO:0006289: nucleotide-excision repair7.58E-04
40GO:0010073: meristem maintenance8.07E-04
41GO:0009411: response to UV9.61E-04
42GO:0080022: primary root development1.12E-03
43GO:0009408: response to heat1.14E-03
44GO:0006281: DNA repair1.14E-03
45GO:0048868: pollen tube development1.18E-03
46GO:0042752: regulation of circadian rhythm1.23E-03
47GO:0009791: post-embryonic development1.29E-03
48GO:0001666: response to hypoxia1.72E-03
49GO:0006974: cellular response to DNA damage stimulus1.85E-03
50GO:0048573: photoperiodism, flowering1.92E-03
51GO:0009611: response to wounding2.03E-03
52GO:0000724: double-strand break repair via homologous recombination2.33E-03
53GO:0006887: exocytosis2.70E-03
54GO:0031347: regulation of defense response3.24E-03
55GO:0009909: regulation of flower development3.74E-03
56GO:0009620: response to fungus4.17E-03
57GO:0009624: response to nematode4.43E-03
58GO:0051726: regulation of cell cycle4.61E-03
59GO:0000398: mRNA splicing, via spliceosome4.89E-03
60GO:0009790: embryo development5.75E-03
61GO:0007623: circadian rhythm6.45E-03
62GO:0010228: vegetative to reproductive phase transition of meristem6.66E-03
63GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.98E-03
64GO:0009617: response to bacterium7.30E-03
65GO:0010468: regulation of gene expression7.30E-03
66GO:0009793: embryo development ending in seed dormancy9.14E-03
67GO:0007049: cell cycle9.44E-03
68GO:0006355: regulation of transcription, DNA-templated1.15E-02
69GO:0045892: negative regulation of transcription, DNA-templated1.17E-02
70GO:0009908: flower development1.87E-02
71GO:0051301: cell division2.14E-02
72GO:0045893: positive regulation of transcription, DNA-templated2.22E-02
73GO:0006511: ubiquitin-dependent protein catabolic process2.50E-02
74GO:0009414: response to water deprivation3.27E-02
75GO:0006979: response to oxidative stress3.35E-02
76GO:0030154: cell differentiation3.54E-02
77GO:0009733: response to auxin3.61E-02
78GO:0005975: carbohydrate metabolic process4.48E-02
RankGO TermAdjusted P value
1GO:0003856: 3-dehydroquinate synthase activity0.00E+00
2GO:0017049: GTP-Rho binding9.64E-06
3GO:0004594: pantothenate kinase activity2.58E-05
4GO:0004750: ribulose-phosphate 3-epimerase activity2.58E-05
5GO:0030628: pre-mRNA 3'-splice site binding4.69E-05
6GO:0005546: phosphatidylinositol-4,5-bisphosphate binding1.30E-04
7GO:0004003: ATP-dependent DNA helicase activity3.51E-04
8GO:0003713: transcription coactivator activity1.18E-03
9GO:0005515: protein binding1.55E-03
10GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.59E-03
11GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.05E-03
12GO:0051539: 4 iron, 4 sulfur cluster binding2.62E-03
13GO:0008017: microtubule binding6.66E-03
14GO:0046982: protein heterodimerization activity8.63E-03
15GO:0046872: metal ion binding1.10E-02
16GO:0042803: protein homodimerization activity1.19E-02
17GO:0003924: GTPase activity1.34E-02
18GO:0003677: DNA binding2.53E-02
19GO:0005525: GTP binding2.87E-02
20GO:0046983: protein dimerization activity4.09E-02
RankGO TermAdjusted P value
1GO:0008541: proteasome regulatory particle, lid subcomplex4.34E-06
2GO:0005672: transcription factor TFIIA complex4.69E-05
3GO:0089701: U2AF4.69E-05
4GO:0000502: proteasome complex1.69E-04
5GO:0031595: nuclear proteasome complex2.34E-04
6GO:0005742: mitochondrial outer membrane translocase complex3.11E-04
7GO:0090404: pollen tube tip4.78E-04
8GO:0005741: mitochondrial outer membrane8.59E-04
9GO:0005744: mitochondrial inner membrane presequence translocase complex1.01E-03
10GO:0000145: exocyst1.41E-03
11GO:0005856: cytoskeleton3.08E-03
12GO:0005681: spliceosomal complex3.90E-03
13GO:0016607: nuclear speck3.99E-03
14GO:0009524: phragmoplast5.36E-03
15GO:0005829: cytosol6.14E-03
16GO:0005634: nucleus6.81E-03
17GO:0005743: mitochondrial inner membrane1.27E-02
18GO:0022626: cytosolic ribosome1.95E-02
19GO:0005777: peroxisome2.22E-02
20GO:0005802: trans-Golgi network2.82E-02
21GO:0005768: endosome3.09E-02
22GO:0009536: plastid3.85E-02
23GO:0005730: nucleolus4.84E-02
Gene type



Gene DE type