Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G19550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072660: maintenance of protein location in plasma membrane0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0042430: indole-containing compound metabolic process0.00E+00
4GO:1900367: positive regulation of defense response to insect0.00E+00
5GO:0019427: acetyl-CoA biosynthetic process from acetate0.00E+00
6GO:0006099: tricarboxylic acid cycle4.28E-11
7GO:0046686: response to cadmium ion1.77E-09
8GO:0006511: ubiquitin-dependent protein catabolic process2.25E-08
9GO:0009651: response to salt stress1.40E-06
10GO:0006102: isocitrate metabolic process2.63E-06
11GO:0006096: glycolytic process1.33E-05
12GO:0010363: regulation of plant-type hypersensitive response2.77E-05
13GO:0045454: cell redox homeostasis5.79E-05
14GO:0006631: fatty acid metabolic process6.34E-05
15GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly6.61E-05
16GO:0034975: protein folding in endoplasmic reticulum1.93E-04
17GO:0071586: CAAX-box protein processing1.93E-04
18GO:0015760: glucose-6-phosphate transport1.93E-04
19GO:0051245: negative regulation of cellular defense response1.93E-04
20GO:0006422: aspartyl-tRNA aminoacylation1.93E-04
21GO:0080173: male-female gamete recognition during double fertilization1.93E-04
22GO:0010482: regulation of epidermal cell division1.93E-04
23GO:0033306: phytol metabolic process1.93E-04
24GO:1901183: positive regulation of camalexin biosynthetic process1.93E-04
25GO:0051775: response to redox state1.93E-04
26GO:0006083: acetate metabolic process1.93E-04
27GO:0080120: CAAX-box protein maturation1.93E-04
28GO:0030163: protein catabolic process1.99E-04
29GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.33E-04
30GO:0010618: aerenchyma formation4.33E-04
31GO:0019521: D-gluconate metabolic process4.33E-04
32GO:0015865: purine nucleotide transport4.33E-04
33GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine4.33E-04
34GO:0008535: respiratory chain complex IV assembly4.33E-04
35GO:0031349: positive regulation of defense response4.33E-04
36GO:0015712: hexose phosphate transport4.33E-04
37GO:0009156: ribonucleoside monophosphate biosynthetic process4.33E-04
38GO:0010043: response to zinc ion4.74E-04
39GO:0034976: response to endoplasmic reticulum stress7.02E-04
40GO:0015714: phosphoenolpyruvate transport7.06E-04
41GO:0035436: triose phosphate transmembrane transport7.06E-04
42GO:0072661: protein targeting to plasma membrane7.06E-04
43GO:0055114: oxidation-reduction process9.04E-04
44GO:0033617: mitochondrial respiratory chain complex IV assembly1.01E-03
45GO:0046902: regulation of mitochondrial membrane permeability1.01E-03
46GO:0006612: protein targeting to membrane1.01E-03
47GO:0010148: transpiration1.01E-03
48GO:0001676: long-chain fatty acid metabolic process1.01E-03
49GO:0046836: glycolipid transport1.01E-03
50GO:0019438: aromatic compound biosynthetic process1.01E-03
51GO:0030433: ubiquitin-dependent ERAD pathway1.02E-03
52GO:0031348: negative regulation of defense response1.02E-03
53GO:0010109: regulation of photosynthesis1.34E-03
54GO:0033356: UDP-L-arabinose metabolic process1.34E-03
55GO:0051567: histone H3-K9 methylation1.34E-03
56GO:0015713: phosphoglycerate transport1.34E-03
57GO:0080142: regulation of salicylic acid biosynthetic process1.34E-03
58GO:0009165: nucleotide biosynthetic process1.34E-03
59GO:0006542: glutamine biosynthetic process1.34E-03
60GO:0006979: response to oxidative stress1.48E-03
61GO:0010225: response to UV-C1.70E-03
62GO:0030041: actin filament polymerization1.70E-03
63GO:0018279: protein N-linked glycosylation via asparagine1.70E-03
64GO:0006564: L-serine biosynthetic process1.70E-03
65GO:0009737: response to abscisic acid2.04E-03
66GO:0006086: acetyl-CoA biosynthetic process from pyruvate2.10E-03
67GO:0009643: photosynthetic acclimation2.10E-03
68GO:0010942: positive regulation of cell death2.10E-03
69GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.10E-03
70GO:0010310: regulation of hydrogen peroxide metabolic process2.52E-03
71GO:0071470: cellular response to osmotic stress2.52E-03
72GO:0006458: 'de novo' protein folding2.52E-03
73GO:0042026: protein refolding2.52E-03
74GO:0009816: defense response to bacterium, incompatible interaction2.82E-03
75GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c2.96E-03
76GO:0042773: ATP synthesis coupled electron transport2.96E-03
77GO:0009627: systemic acquired resistance2.98E-03
78GO:0009061: anaerobic respiration3.43E-03
79GO:0010928: regulation of auxin mediated signaling pathway3.43E-03
80GO:0009787: regulation of abscisic acid-activated signaling pathway3.43E-03
81GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.43E-03
82GO:0048658: anther wall tapetum development3.43E-03
83GO:0031540: regulation of anthocyanin biosynthetic process3.43E-03
84GO:0006499: N-terminal protein myristoylation3.83E-03
85GO:2000031: regulation of salicylic acid mediated signaling pathway3.93E-03
86GO:0009699: phenylpropanoid biosynthetic process3.93E-03
87GO:0009617: response to bacterium4.12E-03
88GO:0009853: photorespiration4.40E-03
89GO:0046685: response to arsenic-containing substance4.44E-03
90GO:0006098: pentose-phosphate shunt4.44E-03
91GO:0080144: amino acid homeostasis4.44E-03
92GO:0019432: triglyceride biosynthetic process4.44E-03
93GO:0009060: aerobic respiration4.44E-03
94GO:1900426: positive regulation of defense response to bacterium4.99E-03
95GO:0010205: photoinhibition4.99E-03
96GO:0043067: regulation of programmed cell death4.99E-03
97GO:0030042: actin filament depolymerization4.99E-03
98GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.99E-03
99GO:0006468: protein phosphorylation5.24E-03
100GO:0007064: mitotic sister chromatid cohesion5.55E-03
101GO:0006896: Golgi to vacuole transport5.55E-03
102GO:0006032: chitin catabolic process5.55E-03
103GO:0043069: negative regulation of programmed cell death5.55E-03
104GO:0009744: response to sucrose5.66E-03
105GO:0051707: response to other organism5.66E-03
106GO:0009073: aromatic amino acid family biosynthetic process6.13E-03
107GO:0009807: lignan biosynthetic process6.13E-03
108GO:0016485: protein processing6.13E-03
109GO:0048765: root hair cell differentiation6.13E-03
110GO:0006790: sulfur compound metabolic process6.73E-03
111GO:0002213: defense response to insect6.73E-03
112GO:0010105: negative regulation of ethylene-activated signaling pathway6.73E-03
113GO:0006094: gluconeogenesis7.36E-03
114GO:0005986: sucrose biosynthetic process7.36E-03
115GO:0006006: glucose metabolic process7.36E-03
116GO:2000028: regulation of photoperiodism, flowering7.36E-03
117GO:0007034: vacuolar transport8.01E-03
118GO:0046688: response to copper ion8.67E-03
119GO:0070588: calcium ion transmembrane transport8.67E-03
120GO:0046854: phosphatidylinositol phosphorylation8.67E-03
121GO:0048316: seed development9.32E-03
122GO:0009116: nucleoside metabolic process1.01E-02
123GO:0080147: root hair cell development1.01E-02
124GO:0009863: salicylic acid mediated signaling pathway1.01E-02
125GO:0010026: trichome differentiation1.08E-02
126GO:0006825: copper ion transport1.08E-02
127GO:0061077: chaperone-mediated protein folding1.15E-02
128GO:0048278: vesicle docking1.15E-02
129GO:2000022: regulation of jasmonic acid mediated signaling pathway1.23E-02
130GO:0007005: mitochondrion organization1.23E-02
131GO:0009408: response to heat1.24E-02
132GO:0006508: proteolysis1.31E-02
133GO:0009625: response to insect1.31E-02
134GO:0006817: phosphate ion transport1.39E-02
135GO:0019722: calcium-mediated signaling1.39E-02
136GO:0009561: megagametogenesis1.39E-02
137GO:0009306: protein secretion1.39E-02
138GO:0051028: mRNA transport1.47E-02
139GO:0080022: primary root development1.55E-02
140GO:0009790: embryo development1.59E-02
141GO:0010154: fruit development1.63E-02
142GO:0048544: recognition of pollen1.72E-02
143GO:0015986: ATP synthesis coupled proton transport1.72E-02
144GO:0061025: membrane fusion1.72E-02
145GO:0006623: protein targeting to vacuole1.81E-02
146GO:0009749: response to glucose1.81E-02
147GO:0019252: starch biosynthetic process1.81E-02
148GO:0000302: response to reactive oxygen species1.90E-02
149GO:0010193: response to ozone1.90E-02
150GO:0007264: small GTPase mediated signal transduction1.99E-02
151GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.11E-02
152GO:0007166: cell surface receptor signaling pathway2.16E-02
153GO:0006464: cellular protein modification process2.18E-02
154GO:0016579: protein deubiquitination2.37E-02
155GO:0001666: response to hypoxia2.47E-02
156GO:0009615: response to virus2.47E-02
157GO:0009555: pollen development2.55E-02
158GO:0042128: nitrate assimilation2.67E-02
159GO:0006906: vesicle fusion2.67E-02
160GO:0016311: dephosphorylation2.88E-02
161GO:0030244: cellulose biosynthetic process2.98E-02
162GO:0048767: root hair elongation3.09E-02
163GO:0009832: plant-type cell wall biogenesis3.09E-02
164GO:0009407: toxin catabolic process3.20E-02
165GO:0010119: regulation of stomatal movement3.31E-02
166GO:0055085: transmembrane transport3.43E-02
167GO:0006457: protein folding3.52E-02
168GO:0009867: jasmonic acid mediated signaling pathway3.53E-02
169GO:0046777: protein autophosphorylation3.87E-02
170GO:0006839: mitochondrial transport3.87E-02
171GO:0044550: secondary metabolite biosynthetic process3.93E-02
172GO:0006887: exocytosis3.99E-02
173GO:0042542: response to hydrogen peroxide4.11E-02
174GO:0009644: response to high light intensity4.47E-02
175GO:0009636: response to toxic substance4.59E-02
176GO:0009846: pollen germination4.96E-02
177GO:0009664: plant-type cell wall organization4.96E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0009940: amino-terminal vacuolar sorting propeptide binding0.00E+00
3GO:0050220: prostaglandin-E synthase activity0.00E+00
4GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
5GO:0008843: endochitinase activity0.00E+00
6GO:0035885: exochitinase activity0.00E+00
7GO:0004298: threonine-type endopeptidase activity3.12E-10
8GO:0005507: copper ion binding2.86E-08
9GO:0051287: NAD binding2.75E-07
10GO:0004450: isocitrate dehydrogenase (NADP+) activity1.77E-06
11GO:0005524: ATP binding2.24E-06
12GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.50E-05
13GO:0000287: magnesium ion binding1.95E-05
14GO:0008233: peptidase activity3.49E-05
15GO:0004029: aldehyde dehydrogenase (NAD) activity6.61E-05
16GO:0036402: proteasome-activating ATPase activity6.61E-05
17GO:0003756: protein disulfide isomerase activity8.59E-05
18GO:0102391: decanoate--CoA ligase activity9.18E-05
19GO:0004467: long-chain fatty acid-CoA ligase activity1.22E-04
20GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity1.93E-04
21GO:0003987: acetate-CoA ligase activity1.93E-04
22GO:0004815: aspartate-tRNA ligase activity1.93E-04
23GO:0008802: betaine-aldehyde dehydrogenase activity1.93E-04
24GO:0010209: vacuolar sorting signal binding1.93E-04
25GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity1.93E-04
26GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity2.82E-04
27GO:0004617: phosphoglycerate dehydrogenase activity4.33E-04
28GO:0015152: glucose-6-phosphate transmembrane transporter activity4.33E-04
29GO:0004775: succinate-CoA ligase (ADP-forming) activity4.33E-04
30GO:0015036: disulfide oxidoreductase activity4.33E-04
31GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity4.33E-04
32GO:0048531: beta-1,3-galactosyltransferase activity4.33E-04
33GO:0004776: succinate-CoA ligase (GDP-forming) activity4.33E-04
34GO:0004634: phosphopyruvate hydratase activity4.33E-04
35GO:0050897: cobalt ion binding4.74E-04
36GO:0015114: phosphate ion transmembrane transporter activity5.01E-04
37GO:0005315: inorganic phosphate transmembrane transporter activity5.01E-04
38GO:0004674: protein serine/threonine kinase activity5.78E-04
39GO:0017025: TBP-class protein binding6.32E-04
40GO:0016531: copper chaperone activity7.06E-04
41GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity7.06E-04
42GO:0004148: dihydrolipoyl dehydrogenase activity7.06E-04
43GO:0016805: dipeptidase activity7.06E-04
44GO:0071917: triose-phosphate transmembrane transporter activity7.06E-04
45GO:0004540: ribonuclease activity9.35E-04
46GO:0017089: glycolipid transporter activity1.01E-03
47GO:0004749: ribose phosphate diphosphokinase activity1.01E-03
48GO:0004108: citrate (Si)-synthase activity1.01E-03
49GO:0004449: isocitrate dehydrogenase (NAD+) activity1.01E-03
50GO:0031176: endo-1,4-beta-xylanase activity1.01E-03
51GO:0051861: glycolipid binding1.34E-03
52GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity1.34E-03
53GO:0003995: acyl-CoA dehydrogenase activity1.34E-03
54GO:0043495: protein anchor1.34E-03
55GO:0015120: phosphoglycerate transmembrane transporter activity1.34E-03
56GO:0008177: succinate dehydrogenase (ubiquinone) activity1.70E-03
57GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.70E-03
58GO:0000104: succinate dehydrogenase activity1.70E-03
59GO:0005471: ATP:ADP antiporter activity1.70E-03
60GO:0004356: glutamate-ammonia ligase activity1.70E-03
61GO:0016208: AMP binding2.10E-03
62GO:0051920: peroxiredoxin activity2.52E-03
63GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.52E-03
64GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.52E-03
65GO:0004144: diacylglycerol O-acyltransferase activity2.52E-03
66GO:0004656: procollagen-proline 4-dioxygenase activity2.52E-03
67GO:0008235: metalloexopeptidase activity2.96E-03
68GO:0008121: ubiquinol-cytochrome-c reductase activity2.96E-03
69GO:0004806: triglyceride lipase activity3.14E-03
70GO:0016209: antioxidant activity3.43E-03
71GO:0004222: metalloendopeptidase activity3.83E-03
72GO:0071949: FAD binding4.44E-03
73GO:0004743: pyruvate kinase activity4.99E-03
74GO:0030955: potassium ion binding4.99E-03
75GO:0050661: NADP binding5.01E-03
76GO:0008171: O-methyltransferase activity5.55E-03
77GO:0051537: 2 iron, 2 sulfur cluster binding6.12E-03
78GO:0044183: protein binding involved in protein folding6.13E-03
79GO:0004129: cytochrome-c oxidase activity6.13E-03
80GO:0004177: aminopeptidase activity6.13E-03
81GO:0050660: flavin adenine dinucleotide binding6.90E-03
82GO:0005262: calcium channel activity7.36E-03
83GO:0005388: calcium-transporting ATPase activity7.36E-03
84GO:0004175: endopeptidase activity8.01E-03
85GO:0004535: poly(A)-specific ribonuclease activity8.01E-03
86GO:0008266: poly(U) RNA binding8.01E-03
87GO:0008061: chitin binding8.67E-03
88GO:0003712: transcription cofactor activity8.67E-03
89GO:0004190: aspartic-type endopeptidase activity8.67E-03
90GO:0016740: transferase activity8.69E-03
91GO:0003954: NADH dehydrogenase activity1.01E-02
92GO:0051536: iron-sulfur cluster binding1.01E-02
93GO:0004672: protein kinase activity1.04E-02
94GO:0003779: actin binding1.06E-02
95GO:0015035: protein disulfide oxidoreductase activity1.12E-02
96GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.15E-02
97GO:0005516: calmodulin binding1.19E-02
98GO:0022891: substrate-specific transmembrane transporter activity1.31E-02
99GO:0009055: electron carrier activity1.35E-02
100GO:0016301: kinase activity1.62E-02
101GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.63E-02
102GO:0005509: calcium ion binding1.65E-02
103GO:0008137: NADH dehydrogenase (ubiquinone) activity1.90E-02
104GO:0004843: thiol-dependent ubiquitin-specific protease activity1.90E-02
105GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.08E-02
106GO:0008237: metallopeptidase activity2.27E-02
107GO:0016597: amino acid binding2.37E-02
108GO:0009931: calcium-dependent protein serine/threonine kinase activity2.67E-02
109GO:0030247: polysaccharide binding2.77E-02
110GO:0004683: calmodulin-dependent protein kinase activity2.77E-02
111GO:0016491: oxidoreductase activity2.80E-02
112GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.88E-02
113GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.98E-02
114GO:0030145: manganese ion binding3.31E-02
115GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.53E-02
116GO:0004497: monooxygenase activity3.62E-02
117GO:0000149: SNARE binding3.76E-02
118GO:0051539: 4 iron, 4 sulfur cluster binding3.87E-02
119GO:0004364: glutathione transferase activity4.11E-02
120GO:0005484: SNAP receptor activity4.23E-02
121GO:0015293: symporter activity4.59E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0000502: proteasome complex2.06E-13
4GO:0019773: proteasome core complex, alpha-subunit complex1.90E-10
5GO:0005839: proteasome core complex3.12E-10
6GO:0005829: cytosol9.03E-10
7GO:0005740: mitochondrial envelope9.75E-06
8GO:0005774: vacuolar membrane9.95E-06
9GO:0005783: endoplasmic reticulum5.24E-05
10GO:0005759: mitochondrial matrix5.94E-05
11GO:0031597: cytosolic proteasome complex9.18E-05
12GO:0031595: nuclear proteasome complex1.22E-04
13GO:0045273: respiratory chain complex II1.56E-04
14GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.56E-04
15GO:0016020: membrane1.61E-04
16GO:0005747: mitochondrial respiratory chain complex I1.80E-04
17GO:0005886: plasma membrane1.82E-04
18GO:0045252: oxoglutarate dehydrogenase complex1.93E-04
19GO:0005911: cell-cell junction1.93E-04
20GO:0009507: chloroplast1.98E-04
21GO:0008540: proteasome regulatory particle, base subcomplex2.82E-04
22GO:0005788: endoplasmic reticulum lumen2.97E-04
23GO:0022626: cytosolic ribosome3.24E-04
24GO:0008541: proteasome regulatory particle, lid subcomplex3.85E-04
25GO:0005901: caveola4.33E-04
26GO:0000015: phosphopyruvate hydratase complex4.33E-04
27GO:0031314: extrinsic component of mitochondrial inner membrane4.33E-04
28GO:0005777: peroxisome4.73E-04
29GO:0005743: mitochondrial inner membrane4.98E-04
30GO:0005750: mitochondrial respiratory chain complex III5.65E-04
31GO:0005773: vacuole7.14E-04
32GO:0005758: mitochondrial intermembrane space7.77E-04
33GO:0045271: respiratory chain complex I8.55E-04
34GO:0005741: mitochondrial outer membrane9.35E-04
35GO:0030658: transport vesicle membrane1.01E-03
36GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.34E-03
37GO:0030660: Golgi-associated vesicle membrane1.34E-03
38GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.34E-03
39GO:0005794: Golgi apparatus1.65E-03
40GO:0005746: mitochondrial respiratory chain1.70E-03
41GO:0008250: oligosaccharyltransferase complex1.70E-03
42GO:0005618: cell wall2.76E-03
43GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane3.43E-03
44GO:0009514: glyoxysome3.93E-03
45GO:0000326: protein storage vacuole3.93E-03
46GO:0030665: clathrin-coated vesicle membrane4.99E-03
47GO:0017119: Golgi transport complex5.55E-03
48GO:0005739: mitochondrion5.98E-03
49GO:0005765: lysosomal membrane6.13E-03
50GO:0031966: mitochondrial membrane7.11E-03
51GO:0009506: plasmodesma8.65E-03
52GO:0030176: integral component of endoplasmic reticulum membrane8.67E-03
53GO:0005753: mitochondrial proton-transporting ATP synthase complex8.67E-03
54GO:0009570: chloroplast stroma8.99E-03
55GO:0015629: actin cytoskeleton1.31E-02
56GO:0005802: trans-Golgi network1.31E-02
57GO:0005730: nucleolus1.33E-02
58GO:0005770: late endosome1.63E-02
59GO:0009504: cell plate1.81E-02
60GO:0005887: integral component of plasma membrane1.82E-02
61GO:0048046: apoplast1.82E-02
62GO:0016592: mediator complex1.99E-02
63GO:0000932: P-body2.47E-02
64GO:0009536: plastid2.52E-02
65GO:0005643: nuclear pore2.98E-02
66GO:0005819: spindle3.76E-02
67GO:0031201: SNARE complex3.99E-02
68GO:0031902: late endosome membrane3.99E-02
Gene type



Gene DE type