co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G18760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015717: triose phosphate transport	0.00E+00
2	GO:0009661: chromoplast organization	0.00E+00
3	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
4	GO:0070584: mitochondrion morphogenesis	0.00E+00
5	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
6	GO:0015970: guanosine tetraphosphate biosynthetic process	0.00E+00
7	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
8	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
9	GO:0046677: response to antibiotic	0.00E+00
10	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
11	GO:0009640: photomorphogenesis	4.11E-07
12	GO:0010114: response to red light	1.33E-05
13	GO:0009643: photosynthetic acclimation	2.35E-05
14	GO:0050821: protein stabilization	5.89E-05
15	GO:0015979: photosynthesis	5.94E-05
16	GO:0006475: internal protein amino acid acetylation	1.02E-04
17	GO:0006474: N-terminal protein amino acid acetylation	1.02E-04
18	GO:0017198: N-terminal peptidyl-serine acetylation	1.02E-04
19	GO:0015995: chlorophyll biosynthetic process	1.02E-04
20	GO:0006824: cobalt ion transport	1.02E-04
21	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	1.02E-04
22	GO:0007623: circadian rhythm	1.33E-04
23	GO:0009637: response to blue light	1.67E-04
24	GO:0018107: peptidyl-threonine phosphorylation	2.09E-04
25	GO:0071497: cellular response to freezing	2.40E-04
26	GO:0090342: regulation of cell aging	2.40E-04
27	GO:0050992: dimethylallyl diphosphate biosynthetic process	2.40E-04
28	GO:1904143: positive regulation of carotenoid biosynthetic process	2.40E-04
29	GO:0009915: phloem sucrose loading	2.40E-04
30	GO:0042548: regulation of photosynthesis, light reaction	2.40E-04
31	GO:0034755: iron ion transmembrane transport	2.40E-04
32	GO:0035436: triose phosphate transmembrane transport	3.99E-04
33	GO:0048575: short-day photoperiodism, flowering	3.99E-04
34	GO:1902448: positive regulation of shade avoidance	3.99E-04
35	GO:0010017: red or far-red light signaling pathway	4.41E-04
36	GO:0055114: oxidation-reduction process	4.64E-04
37	GO:0042938: dipeptide transport	7.62E-04
38	GO:0009755: hormone-mediated signaling pathway	7.62E-04
39	GO:1901141: regulation of lignin biosynthetic process	7.62E-04
40	GO:0009765: photosynthesis, light harvesting	7.62E-04
41	GO:2000306: positive regulation of photomorphogenesis	7.62E-04
42	GO:0051205: protein insertion into membrane	7.62E-04
43	GO:0015713: phosphoglycerate transport	7.62E-04
44	GO:0015846: polyamine transport	7.62E-04
45	GO:0045038: protein import into chloroplast thylakoid membrane	9.62E-04
46	GO:0016123: xanthophyll biosynthetic process	9.62E-04
47	GO:0010438: cellular response to sulfur starvation	9.62E-04
48	GO:0016120: carotene biosynthetic process	9.62E-04
49	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.17E-03
50	GO:0045962: positive regulation of development, heterochronic	1.17E-03
51	GO:0032973: amino acid export	1.17E-03
52	GO:0006655: phosphatidylglycerol biosynthetic process	1.17E-03
53	GO:0010189: vitamin E biosynthetic process	1.40E-03
54	GO:0071470: cellular response to osmotic stress	1.40E-03
55	GO:0031930: mitochondria-nucleus signaling pathway	1.40E-03
56	GO:0010218: response to far red light	1.62E-03
57	GO:0043090: amino acid import	1.65E-03
58	GO:0080186: developmental vegetative growth	1.65E-03
59	GO:0009769: photosynthesis, light harvesting in photosystem II	1.65E-03
60	GO:0009645: response to low light intensity stimulus	1.65E-03
61	GO:0006865: amino acid transport	1.77E-03
62	GO:2000070: regulation of response to water deprivation	1.90E-03
63	GO:0009819: drought recovery	1.90E-03
64	GO:0009642: response to light intensity	1.90E-03
65	GO:0010439: regulation of glucosinolate biosynthetic process	1.90E-03
66	GO:0034599: cellular response to oxidative stress	1.94E-03
67	GO:0010100: negative regulation of photomorphogenesis	2.17E-03
68	GO:0007186: G-protein coupled receptor signaling pathway	2.17E-03
69	GO:0009657: plastid organization	2.17E-03
70	GO:0009723: response to ethylene	2.26E-03
71	GO:0048507: meristem development	2.45E-03
72	GO:0010206: photosystem II repair	2.45E-03
73	GO:0080144: amino acid homeostasis	2.45E-03
74	GO:0080167: response to karrikin	2.47E-03
75	GO:0009644: response to high light intensity	2.57E-03
76	GO:0008356: asymmetric cell division	2.74E-03
77	GO:0009688: abscisic acid biosynthetic process	3.05E-03
78	GO:0045454: cell redox homeostasis	3.10E-03
79	GO:0030148: sphingolipid biosynthetic process	3.36E-03
80	GO:0046856: phosphatidylinositol dephosphorylation	3.36E-03
81	GO:0009682: induced systemic resistance	3.36E-03
82	GO:0015770: sucrose transport	3.36E-03
83	GO:0043085: positive regulation of catalytic activity	3.36E-03
84	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.69E-03
85	GO:0016024: CDP-diacylglycerol biosynthetic process	3.69E-03
86	GO:0015706: nitrate transport	3.69E-03
87	GO:2000028: regulation of photoperiodism, flowering	4.02E-03
88	GO:0009887: animal organ morphogenesis	4.37E-03
89	GO:0009266: response to temperature stimulus	4.37E-03
90	GO:0018105: peptidyl-serine phosphorylation	4.66E-03
91	GO:0090351: seedling development	4.72E-03
92	GO:0005985: sucrose metabolic process	4.72E-03
93	GO:0034976: response to endoplasmic reticulum stress	5.09E-03
94	GO:0009768: photosynthesis, light harvesting in photosystem I	5.85E-03
95	GO:0006874: cellular calcium ion homeostasis	5.85E-03
96	GO:0003333: amino acid transmembrane transport	6.24E-03
97	GO:0009269: response to desiccation	6.24E-03
98	GO:0009625: response to insect	7.06E-03
99	GO:0070417: cellular response to cold	7.91E-03
100	GO:0010228: vegetative to reproductive phase transition of meristem	8.17E-03
101	GO:0009416: response to light stimulus	8.38E-03
102	GO:0006662: glycerol ether metabolic process	8.80E-03
103	GO:0010182: sugar mediated signaling pathway	8.80E-03
104	GO:0009741: response to brassinosteroid	8.80E-03
105	GO:0010305: leaf vascular tissue pattern formation	8.80E-03
106	GO:0008654: phospholipid biosynthetic process	9.73E-03
107	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.02E-02
108	GO:0010193: response to ozone	1.02E-02
109	GO:0009658: chloroplast organization	1.21E-02
110	GO:0010027: thylakoid membrane organization	1.32E-02
111	GO:0048366: leaf development	1.43E-02
112	GO:0048573: photoperiodism, flowering	1.48E-02
113	GO:0016311: dephosphorylation	1.54E-02
114	GO:0018298: protein-chromophore linkage	1.60E-02
115	GO:0044550: secondary metabolite biosynthetic process	1.63E-02
116	GO:0000160: phosphorelay signal transduction system	1.65E-02
117	GO:0006351: transcription, DNA-templated	1.65E-02
118	GO:0010311: lateral root formation	1.65E-02
119	GO:0006811: ion transport	1.71E-02
120	GO:0007568: aging	1.77E-02
121	GO:0009910: negative regulation of flower development	1.77E-02
122	GO:0009631: cold acclimation	1.77E-02
123	GO:0048527: lateral root development	1.77E-02
124	GO:0009867: jasmonic acid mediated signaling pathway	1.89E-02
125	GO:0006631: fatty acid metabolic process	2.13E-02
126	GO:0006629: lipid metabolic process	2.22E-02
127	GO:0048364: root development	2.32E-02
128	GO:0009965: leaf morphogenesis	2.46E-02
129	GO:0006508: proteolysis	2.65E-02
130	GO:0006812: cation transport	2.66E-02
131	GO:0009585: red, far-red light phototransduction	2.80E-02
132	GO:0010224: response to UV-B	2.86E-02
133	GO:0006857: oligopeptide transport	2.94E-02
134	GO:0006417: regulation of translation	3.01E-02
135	GO:0009740: gibberellic acid mediated signaling pathway	3.44E-02
136	GO:0009624: response to nematode	3.59E-02
137	GO:0006396: RNA processing	3.67E-02
138	GO:0009742: brassinosteroid mediated signaling pathway	3.75E-02
139	GO:0009611: response to wounding	4.02E-02
140	GO:0035556: intracellular signal transduction	4.15E-02
141	GO:0009845: seed germination	4.46E-02
142	GO:0009790: embryo development	4.70E-02
143	GO:0006355: regulation of transcription, DNA-templated	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
2	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
5	GO:0034639: L-amino acid efflux transmembrane transporter activity	0.00E+00
6	GO:0045550: geranylgeranyl reductase activity	0.00E+00
7	GO:0004462: lactoylglutathione lyase activity	2.35E-05
8	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	1.02E-04
9	GO:1990189: peptide-serine-N-acetyltransferase activity	1.02E-04
10	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.02E-04
11	GO:1990190: peptide-glutamate-N-acetyltransferase activity	1.02E-04
12	GO:0052631: sphingolipid delta-8 desaturase activity	1.02E-04
13	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	1.02E-04
14	GO:0008728: GTP diphosphokinase activity	2.40E-04
15	GO:0080045: quercetin 3'-O-glucosyltransferase activity	2.40E-04
16	GO:0019172: glyoxalase III activity	2.40E-04
17	GO:0016805: dipeptidase activity	3.99E-04
18	GO:0071917: triose-phosphate transmembrane transporter activity	3.99E-04
19	GO:0004180: carboxypeptidase activity	3.99E-04
20	GO:0010277: chlorophyllide a oxygenase [overall] activity	3.99E-04
21	GO:0015203: polyamine transmembrane transporter activity	5.73E-04
22	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	5.73E-04
23	GO:0015120: phosphoglycerate transmembrane transporter activity	7.62E-04
24	GO:0042936: dipeptide transporter activity	7.62E-04
25	GO:0004930: G-protein coupled receptor activity	7.62E-04
26	GO:0051538: 3 iron, 4 sulfur cluster binding	9.62E-04
27	GO:0015297: antiporter activity	1.03E-03
28	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.17E-03
29	GO:0004605: phosphatidate cytidylyltransferase activity	1.17E-03
30	GO:0004602: glutathione peroxidase activity	1.40E-03
31	GO:0008506: sucrose:proton symporter activity	1.65E-03
32	GO:0071949: FAD binding	2.45E-03
33	GO:0051537: 2 iron, 2 sulfur cluster binding	2.57E-03
34	GO:0005381: iron ion transmembrane transporter activity	2.74E-03
35	GO:0015174: basic amino acid transmembrane transporter activity	2.74E-03
36	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	3.05E-03
37	GO:0008047: enzyme activator activity	3.05E-03
38	GO:0008515: sucrose transmembrane transporter activity	3.36E-03
39	GO:0015171: amino acid transmembrane transporter activity	3.53E-03
40	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	3.69E-03
41	GO:0004022: alcohol dehydrogenase (NAD) activity	4.02E-03
42	GO:0016874: ligase activity	4.26E-03
43	GO:0015035: protein disulfide oxidoreductase activity	4.66E-03
44	GO:0004970: ionotropic glutamate receptor activity	4.72E-03
45	GO:0004190: aspartic-type endopeptidase activity	4.72E-03
46	GO:0005217: intracellular ligand-gated ion channel activity	4.72E-03
47	GO:0003712: transcription cofactor activity	4.72E-03
48	GO:0031409: pigment binding	5.09E-03
49	GO:0005215: transporter activity	5.72E-03
50	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	5.81E-03
51	GO:0005216: ion channel activity	5.85E-03
52	GO:0004176: ATP-dependent peptidase activity	6.24E-03
53	GO:0003727: single-stranded RNA binding	7.48E-03
54	GO:0003756: protein disulfide isomerase activity	7.48E-03
55	GO:0047134: protein-disulfide reductase activity	7.91E-03
56	GO:0004672: protein kinase activity	8.79E-03
57	GO:0008080: N-acetyltransferase activity	8.80E-03
58	GO:0004791: thioredoxin-disulfide reductase activity	9.26E-03
59	GO:0019901: protein kinase binding	9.73E-03
60	GO:0048038: quinone binding	1.02E-02
61	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.12E-02
62	GO:0000156: phosphorelay response regulator activity	1.12E-02
63	GO:0016168: chlorophyll binding	1.38E-02
64	GO:0008233: peptidase activity	1.48E-02
65	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.60E-02
66	GO:0004871: signal transducer activity	1.89E-02
67	GO:0003993: acid phosphatase activity	1.95E-02
68	GO:0005506: iron ion binding	2.01E-02
69	GO:0042393: histone binding	2.07E-02
70	GO:0003677: DNA binding	2.34E-02
71	GO:0043621: protein self-association	2.39E-02
72	GO:0015293: symporter activity	2.46E-02
73	GO:0046872: metal ion binding	2.60E-02
74	GO:0005515: protein binding	2.85E-02
75	GO:0016298: lipase activity	2.86E-02
76	GO:0008289: lipid binding	3.09E-02
77	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.37E-02
78	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.37E-02
79	GO:0016746: transferase activity, transferring acyl groups	3.67E-02
80	GO:0016829: lyase activity	4.46E-02
81	GO:0004252: serine-type endopeptidase activity	4.54E-02
82	GO:0015144: carbohydrate transmembrane transporter activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	7.06E-10
2	GO:0009941: chloroplast envelope	5.51E-08
3	GO:0009507: chloroplast	2.32E-07
4	GO:0009534: chloroplast thylakoid	5.99E-07
5	GO:0031969: chloroplast membrane	4.42E-05
6	GO:0031415: NatA complex	2.40E-04
7	GO:0009570: chloroplast stroma	3.28E-04
8	GO:0042651: thylakoid membrane	3.67E-04
9	GO:0016605: PML body	3.99E-04
10	GO:0009517: PSII associated light-harvesting complex II	7.62E-04
11	GO:0030660: Golgi-associated vesicle membrane	7.62E-04
12	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	7.62E-04
13	GO:0009538: photosystem I reaction center	1.90E-03
14	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.90E-03
15	GO:0016604: nuclear body	2.74E-03
16	GO:0005765: lysosomal membrane	3.36E-03
17	GO:0030095: chloroplast photosystem II	4.37E-03
18	GO:0009706: chloroplast inner membrane	4.52E-03
19	GO:0030076: light-harvesting complex	4.72E-03
20	GO:0010287: plastoglobule	5.36E-03
21	GO:0009543: chloroplast thylakoid lumen	5.66E-03
22	GO:0009522: photosystem I	9.26E-03
23	GO:0009523: photosystem II	9.73E-03
24	GO:0009579: thylakoid	1.05E-02
25	GO:0031977: thylakoid lumen	2.13E-02
26	GO:0005887: integral component of plasma membrane	3.02E-02
27	GO:0016020: membrane	3.05E-02
28	GO:0016607: nuclear speck	3.22E-02
29	GO:0010008: endosome membrane	3.22E-02
30	GO:0005834: heterotrimeric G-protein complex	3.30E-02
31	GO:0005789: endoplasmic reticulum membrane	3.48E-02
32	GO:0016021: integral component of membrane	4.12E-02
33	GO:0005623: cell	4.30E-02
34	GO:0005886: plasma membrane	4.67E-02