GO Enrichment Analysis of Co-expressed Genes with
AT5G18460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 4 | GO:0006695: cholesterol biosynthetic process | 3.58E-07 |
| 5 | GO:0045337: farnesyl diphosphate biosynthetic process | 6.45E-05 |
| 6 | GO:0033384: geranyl diphosphate biosynthetic process | 6.45E-05 |
| 7 | GO:0042371: vitamin K biosynthetic process | 8.09E-05 |
| 8 | GO:0006430: lysyl-tRNA aminoacylation | 8.09E-05 |
| 9 | GO:0006650: glycerophospholipid metabolic process | 1.93E-04 |
| 10 | GO:0071258: cellular response to gravity | 1.93E-04 |
| 11 | GO:0006568: tryptophan metabolic process | 1.93E-04 |
| 12 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.93E-04 |
| 13 | GO:0006418: tRNA aminoacylation for protein translation | 2.67E-04 |
| 14 | GO:0007017: microtubule-based process | 2.67E-04 |
| 15 | GO:0010581: regulation of starch biosynthetic process | 3.24E-04 |
| 16 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 3.24E-04 |
| 17 | GO:0042335: cuticle development | 4.48E-04 |
| 18 | GO:0006165: nucleoside diphosphate phosphorylation | 4.66E-04 |
| 19 | GO:0006228: UTP biosynthetic process | 4.66E-04 |
| 20 | GO:0010088: phloem development | 4.66E-04 |
| 21 | GO:0016556: mRNA modification | 4.66E-04 |
| 22 | GO:2001141: regulation of RNA biosynthetic process | 4.66E-04 |
| 23 | GO:0006241: CTP biosynthetic process | 4.66E-04 |
| 24 | GO:0042991: transcription factor import into nucleus | 6.21E-04 |
| 25 | GO:0006085: acetyl-CoA biosynthetic process | 6.21E-04 |
| 26 | GO:0006183: GTP biosynthetic process | 6.21E-04 |
| 27 | GO:0048359: mucilage metabolic process involved in seed coat development | 7.86E-04 |
| 28 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.86E-04 |
| 29 | GO:0006828: manganese ion transport | 9.59E-04 |
| 30 | GO:0006014: D-ribose metabolic process | 9.59E-04 |
| 31 | GO:0048481: plant ovule development | 1.09E-03 |
| 32 | GO:0009658: chloroplast organization | 1.26E-03 |
| 33 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.34E-03 |
| 34 | GO:0016051: carbohydrate biosynthetic process | 1.36E-03 |
| 35 | GO:0048564: photosystem I assembly | 1.54E-03 |
| 36 | GO:0045292: mRNA cis splicing, via spliceosome | 1.54E-03 |
| 37 | GO:0006631: fatty acid metabolic process | 1.61E-03 |
| 38 | GO:0010233: phloem transport | 1.76E-03 |
| 39 | GO:0009657: plastid organization | 1.76E-03 |
| 40 | GO:0019430: removal of superoxide radicals | 1.76E-03 |
| 41 | GO:0032544: plastid translation | 1.76E-03 |
| 42 | GO:0071482: cellular response to light stimulus | 1.76E-03 |
| 43 | GO:0000373: Group II intron splicing | 1.98E-03 |
| 44 | GO:0015780: nucleotide-sugar transport | 1.98E-03 |
| 45 | GO:0045454: cell redox homeostasis | 2.08E-03 |
| 46 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.22E-03 |
| 47 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.22E-03 |
| 48 | GO:0006869: lipid transport | 2.33E-03 |
| 49 | GO:0006415: translational termination | 2.71E-03 |
| 50 | GO:0009073: aromatic amino acid family biosynthetic process | 2.71E-03 |
| 51 | GO:0043085: positive regulation of catalytic activity | 2.71E-03 |
| 52 | GO:0006352: DNA-templated transcription, initiation | 2.71E-03 |
| 53 | GO:0006816: calcium ion transport | 2.71E-03 |
| 54 | GO:0010020: chloroplast fission | 3.52E-03 |
| 55 | GO:0010025: wax biosynthetic process | 4.10E-03 |
| 56 | GO:0007010: cytoskeleton organization | 4.40E-03 |
| 57 | GO:0008299: isoprenoid biosynthetic process | 4.70E-03 |
| 58 | GO:0006633: fatty acid biosynthetic process | 5.18E-03 |
| 59 | GO:0009411: response to UV | 5.67E-03 |
| 60 | GO:0009451: RNA modification | 5.82E-03 |
| 61 | GO:0000271: polysaccharide biosynthetic process | 6.70E-03 |
| 62 | GO:0000413: protein peptidyl-prolyl isomerization | 6.70E-03 |
| 63 | GO:0010051: xylem and phloem pattern formation | 6.70E-03 |
| 64 | GO:0045489: pectin biosynthetic process | 7.06E-03 |
| 65 | GO:0010305: leaf vascular tissue pattern formation | 7.06E-03 |
| 66 | GO:0007018: microtubule-based movement | 7.42E-03 |
| 67 | GO:0048825: cotyledon development | 7.79E-03 |
| 68 | GO:0019252: starch biosynthetic process | 7.79E-03 |
| 69 | GO:0008654: phospholipid biosynthetic process | 7.79E-03 |
| 70 | GO:0071805: potassium ion transmembrane transport | 9.75E-03 |
| 71 | GO:0010027: thylakoid membrane organization | 1.06E-02 |
| 72 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.13E-02 |
| 73 | GO:0071555: cell wall organization | 1.37E-02 |
| 74 | GO:0009637: response to blue light | 1.51E-02 |
| 75 | GO:0006629: lipid metabolic process | 1.62E-02 |
| 76 | GO:0042542: response to hydrogen peroxide | 1.75E-02 |
| 77 | GO:0010114: response to red light | 1.80E-02 |
| 78 | GO:0008643: carbohydrate transport | 1.91E-02 |
| 79 | GO:0042538: hyperosmotic salinity response | 2.12E-02 |
| 80 | GO:0009585: red, far-red light phototransduction | 2.23E-02 |
| 81 | GO:0006813: potassium ion transport | 2.23E-02 |
| 82 | GO:0009736: cytokinin-activated signaling pathway | 2.23E-02 |
| 83 | GO:0009734: auxin-activated signaling pathway | 2.28E-02 |
| 84 | GO:0051726: regulation of cell cycle | 2.99E-02 |
| 85 | GO:0009742: brassinosteroid mediated signaling pathway | 2.99E-02 |
| 86 | GO:0042744: hydrogen peroxide catabolic process | 3.69E-02 |
| 87 | GO:0006457: protein folding | 3.71E-02 |
| 88 | GO:0040008: regulation of growth | 4.09E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0005048: signal sequence binding | 0.00E+00 |
| 4 | GO:0051920: peroxiredoxin activity | 2.28E-05 |
| 5 | GO:0016209: antioxidant activity | 4.08E-05 |
| 6 | GO:0004337: geranyltranstransferase activity | 6.45E-05 |
| 7 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 8.09E-05 |
| 8 | GO:0004824: lysine-tRNA ligase activity | 8.09E-05 |
| 9 | GO:0004161: dimethylallyltranstransferase activity | 1.11E-04 |
| 10 | GO:0002161: aminoacyl-tRNA editing activity | 3.24E-04 |
| 11 | GO:0030267: glyoxylate reductase (NADP) activity | 3.24E-04 |
| 12 | GO:0070330: aromatase activity | 3.24E-04 |
| 13 | GO:0004812: aminoacyl-tRNA ligase activity | 4.15E-04 |
| 14 | GO:0016149: translation release factor activity, codon specific | 4.66E-04 |
| 15 | GO:0004550: nucleoside diphosphate kinase activity | 4.66E-04 |
| 16 | GO:0003878: ATP citrate synthase activity | 4.66E-04 |
| 17 | GO:0019843: rRNA binding | 4.94E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 6.21E-04 |
| 19 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 6.21E-04 |
| 20 | GO:0016987: sigma factor activity | 6.21E-04 |
| 21 | GO:0008289: lipid binding | 7.24E-04 |
| 22 | GO:0005200: structural constituent of cytoskeleton | 7.56E-04 |
| 23 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.86E-04 |
| 24 | GO:0018685: alkane 1-monooxygenase activity | 7.86E-04 |
| 25 | GO:0008374: O-acyltransferase activity | 7.86E-04 |
| 26 | GO:0102391: decanoate--CoA ligase activity | 1.14E-03 |
| 27 | GO:0004747: ribokinase activity | 1.14E-03 |
| 28 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.14E-03 |
| 29 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.14E-03 |
| 30 | GO:0003729: mRNA binding | 1.28E-03 |
| 31 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.34E-03 |
| 32 | GO:0004033: aldo-keto reductase (NADP) activity | 1.54E-03 |
| 33 | GO:0008865: fructokinase activity | 1.54E-03 |
| 34 | GO:0008312: 7S RNA binding | 1.54E-03 |
| 35 | GO:0043621: protein self-association | 1.88E-03 |
| 36 | GO:0003747: translation release factor activity | 1.98E-03 |
| 37 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.03E-03 |
| 38 | GO:0005384: manganese ion transmembrane transporter activity | 2.22E-03 |
| 39 | GO:0008047: enzyme activator activity | 2.46E-03 |
| 40 | GO:0000049: tRNA binding | 2.97E-03 |
| 41 | GO:0004519: endonuclease activity | 3.01E-03 |
| 42 | GO:0008081: phosphoric diester hydrolase activity | 3.24E-03 |
| 43 | GO:0015095: magnesium ion transmembrane transporter activity | 3.24E-03 |
| 44 | GO:0008266: poly(U) RNA binding | 3.52E-03 |
| 45 | GO:0015079: potassium ion transmembrane transporter activity | 4.70E-03 |
| 46 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 5.02E-03 |
| 47 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 5.34E-03 |
| 48 | GO:0008017: microtubule binding | 5.95E-03 |
| 49 | GO:0008514: organic anion transmembrane transporter activity | 6.01E-03 |
| 50 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 7.06E-03 |
| 51 | GO:0008080: N-acetyltransferase activity | 7.06E-03 |
| 52 | GO:0042802: identical protein binding | 7.22E-03 |
| 53 | GO:0004791: thioredoxin-disulfide reductase activity | 7.42E-03 |
| 54 | GO:0004601: peroxidase activity | 8.79E-03 |
| 55 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.94E-03 |
| 56 | GO:0052689: carboxylic ester hydrolase activity | 1.21E-02 |
| 57 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.23E-02 |
| 58 | GO:0008236: serine-type peptidase activity | 1.23E-02 |
| 59 | GO:0003746: translation elongation factor activity | 1.51E-02 |
| 60 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.56E-02 |
| 61 | GO:0003924: GTPase activity | 1.62E-02 |
| 62 | GO:0005198: structural molecule activity | 1.96E-02 |
| 63 | GO:0005524: ATP binding | 1.98E-02 |
| 64 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.23E-02 |
| 65 | GO:0003777: microtubule motor activity | 2.40E-02 |
| 66 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.57E-02 |
| 67 | GO:0016746: transferase activity, transferring acyl groups | 2.93E-02 |
| 68 | GO:0003735: structural constituent of ribosome | 3.25E-02 |
| 69 | GO:0016301: kinase activity | 3.27E-02 |
| 70 | GO:0016758: transferase activity, transferring hexosyl groups | 3.30E-02 |
| 71 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.02E-02 |
| 72 | GO:0005525: GTP binding | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031224: intrinsic component of membrane | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 4.34E-11 |
| 3 | GO:0009507: chloroplast | 2.60E-09 |
| 4 | GO:0046658: anchored component of plasma membrane | 8.60E-06 |
| 5 | GO:0045298: tubulin complex | 6.45E-05 |
| 6 | GO:0009547: plastid ribosome | 8.09E-05 |
| 7 | GO:0000311: plastid large ribosomal subunit | 1.30E-04 |
| 8 | GO:0080085: signal recognition particle, chloroplast targeting | 1.93E-04 |
| 9 | GO:0009941: chloroplast envelope | 2.07E-04 |
| 10 | GO:0009346: citrate lyase complex | 4.66E-04 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 4.94E-04 |
| 12 | GO:0000793: condensed chromosome | 9.59E-04 |
| 13 | GO:0005762: mitochondrial large ribosomal subunit | 1.14E-03 |
| 14 | GO:0000794: condensed nuclear chromosome | 1.34E-03 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 1.34E-03 |
| 16 | GO:0009579: thylakoid | 1.36E-03 |
| 17 | GO:0009534: chloroplast thylakoid | 1.38E-03 |
| 18 | GO:0005874: microtubule | 1.58E-03 |
| 19 | GO:0031977: thylakoid lumen | 1.61E-03 |
| 20 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.76E-03 |
| 21 | GO:0043231: intracellular membrane-bounded organelle | 3.06E-03 |
| 22 | GO:0000312: plastid small ribosomal subunit | 3.52E-03 |
| 23 | GO:0030659: cytoplasmic vesicle membrane | 3.52E-03 |
| 24 | GO:0042651: thylakoid membrane | 4.70E-03 |
| 25 | GO:0009532: plastid stroma | 5.02E-03 |
| 26 | GO:0005871: kinesin complex | 6.35E-03 |
| 27 | GO:0009295: nucleoid | 9.75E-03 |
| 28 | GO:0010319: stromule | 9.75E-03 |
| 29 | GO:0031225: anchored component of membrane | 9.83E-03 |
| 30 | GO:0009535: chloroplast thylakoid membrane | 1.02E-02 |
| 31 | GO:0000325: plant-type vacuole | 1.41E-02 |
| 32 | GO:0005886: plasma membrane | 2.68E-02 |
| 33 | GO:0010287: plastoglobule | 3.24E-02 |
| 34 | GO:0005759: mitochondrial matrix | 3.96E-02 |