Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G17990

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0030149: sphingolipid catabolic process0.00E+00
3GO:0006784: heme a biosynthetic process0.00E+00
4GO:0034050: host programmed cell death induced by symbiont0.00E+00
5GO:0070212: protein poly-ADP-ribosylation0.00E+00
6GO:0046686: response to cadmium ion2.07E-07
7GO:0009617: response to bacterium3.17E-06
8GO:0006564: L-serine biosynthetic process2.79E-05
9GO:0006461: protein complex assembly2.79E-05
10GO:0009626: plant-type hypersensitive response9.52E-05
11GO:0033306: phytol metabolic process1.46E-04
12GO:0055081: anion homeostasis1.46E-04
13GO:0043181: vacuolar sequestering1.46E-04
14GO:0032119: sequestering of zinc ion1.46E-04
15GO:0031669: cellular response to nutrient levels1.46E-04
16GO:0019510: S-adenosylhomocysteine catabolic process1.46E-04
17GO:0009609: response to symbiotic bacterium1.46E-04
18GO:0043069: negative regulation of programmed cell death2.22E-04
19GO:0006952: defense response2.48E-04
20GO:0033353: S-adenosylmethionine cycle3.33E-04
21GO:0015865: purine nucleotide transport3.33E-04
22GO:0019752: carboxylic acid metabolic process3.33E-04
23GO:0045905: positive regulation of translational termination3.33E-04
24GO:0045901: positive regulation of translational elongation3.33E-04
25GO:0006123: mitochondrial electron transport, cytochrome c to oxygen3.33E-04
26GO:0006452: translational frameshifting3.33E-04
27GO:0006099: tricarboxylic acid cycle3.40E-04
28GO:0070588: calcium ion transmembrane transport4.32E-04
29GO:0010581: regulation of starch biosynthetic process5.47E-04
30GO:0045039: protein import into mitochondrial inner membrane5.47E-04
31GO:0009855: determination of bilateral symmetry7.83E-04
32GO:0002679: respiratory burst involved in defense response7.83E-04
33GO:0006515: misfolded or incompletely synthesized protein catabolic process7.83E-04
34GO:0046836: glycolipid transport7.83E-04
35GO:0007231: osmosensory signaling pathway7.83E-04
36GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly7.83E-04
37GO:0043207: response to external biotic stimulus7.83E-04
38GO:0046902: regulation of mitochondrial membrane permeability7.83E-04
39GO:0009611: response to wounding8.04E-04
40GO:0006606: protein import into nucleus9.62E-04
41GO:0006621: protein retention in ER lumen1.04E-03
42GO:0033500: carbohydrate homeostasis1.04E-03
43GO:0051205: protein insertion into membrane1.04E-03
44GO:0034440: lipid oxidation1.04E-03
45GO:0006346: methylation-dependent chromatin silencing1.04E-03
46GO:0009652: thigmotropism1.04E-03
47GO:0045727: positive regulation of translation1.04E-03
48GO:0042273: ribosomal large subunit biogenesis1.04E-03
49GO:0015986: ATP synthesis coupled proton transport1.11E-03
50GO:0009646: response to absence of light1.11E-03
51GO:0010193: response to ozone1.27E-03
52GO:0006511: ubiquitin-dependent protein catabolic process1.31E-03
53GO:0031365: N-terminal protein amino acid modification1.31E-03
54GO:0009697: salicylic acid biosynthetic process1.31E-03
55GO:0030163: protein catabolic process1.44E-03
56GO:0007035: vacuolar acidification1.61E-03
57GO:0009615: response to virus1.81E-03
58GO:0009612: response to mechanical stimulus1.93E-03
59GO:0009094: L-phenylalanine biosynthetic process1.93E-03
60GO:0009423: chorismate biosynthetic process1.93E-03
61GO:0080086: stamen filament development1.93E-03
62GO:0009627: systemic acquired resistance2.02E-03
63GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c2.27E-03
64GO:0009610: response to symbiotic fungus2.27E-03
65GO:0080186: developmental vegetative growth2.27E-03
66GO:0009651: response to salt stress2.29E-03
67GO:0050821: protein stabilization2.63E-03
68GO:0031540: regulation of anthocyanin biosynthetic process2.63E-03
69GO:0006102: isocitrate metabolic process2.63E-03
70GO:0042742: defense response to bacterium2.65E-03
71GO:0006979: response to oxidative stress2.69E-03
72GO:0010262: somatic embryogenesis3.00E-03
73GO:0010497: plasmodesmata-mediated intercellular transport3.00E-03
74GO:0019432: triglyceride biosynthetic process3.40E-03
75GO:0010112: regulation of systemic acquired resistance3.40E-03
76GO:0006189: 'de novo' IMP biosynthetic process3.40E-03
77GO:0006607: NLS-bearing protein import into nucleus3.40E-03
78GO:0046685: response to arsenic-containing substance3.40E-03
79GO:0051865: protein autoubiquitination3.40E-03
80GO:0009555: pollen development3.52E-03
81GO:2000280: regulation of root development3.81E-03
82GO:0051707: response to other organism3.83E-03
83GO:0009299: mRNA transcription4.23E-03
84GO:0009870: defense response signaling pathway, resistance gene-dependent4.23E-03
85GO:0006032: chitin catabolic process4.23E-03
86GO:0016441: posttranscriptional gene silencing4.23E-03
87GO:0006855: drug transmembrane transport4.46E-03
88GO:0009409: response to cold4.51E-03
89GO:0006913: nucleocytoplasmic transport4.67E-03
90GO:0010072: primary shoot apical meristem specification4.67E-03
91GO:0072593: reactive oxygen species metabolic process4.67E-03
92GO:0009073: aromatic amino acid family biosynthetic process4.67E-03
93GO:0015770: sucrose transport4.67E-03
94GO:0000272: polysaccharide catabolic process4.67E-03
95GO:0016485: protein processing4.67E-03
96GO:0015706: nitrate transport5.13E-03
97GO:0006890: retrograde vesicle-mediated transport, Golgi to ER5.13E-03
98GO:0012501: programmed cell death5.13E-03
99GO:0006810: transport5.20E-03
100GO:0010224: response to UV-B5.33E-03
101GO:0002237: response to molecule of bacterial origin6.09E-03
102GO:0009266: response to temperature stimulus6.09E-03
103GO:0010167: response to nitrate6.59E-03
104GO:0009901: anther dehiscence6.59E-03
105GO:0009624: response to nematode7.32E-03
106GO:0009408: response to heat7.48E-03
107GO:0000027: ribosomal large subunit assembly7.63E-03
108GO:0009863: salicylic acid mediated signaling pathway7.63E-03
109GO:0009695: jasmonic acid biosynthetic process8.18E-03
110GO:0008152: metabolic process8.47E-03
111GO:0031408: oxylipin biosynthetic process8.73E-03
112GO:0016998: cell wall macromolecule catabolic process8.73E-03
113GO:0016226: iron-sulfur cluster assembly9.30E-03
114GO:0035428: hexose transmembrane transport9.30E-03
115GO:0006730: one-carbon metabolic process9.30E-03
116GO:0007005: mitochondrion organization9.30E-03
117GO:0031348: negative regulation of defense response9.30E-03
118GO:0009411: response to UV9.89E-03
119GO:0040007: growth9.89E-03
120GO:0009625: response to insect9.89E-03
121GO:0019722: calcium-mediated signaling1.05E-02
122GO:0009561: megagametogenesis1.05E-02
123GO:0042391: regulation of membrane potential1.17E-02
124GO:0015991: ATP hydrolysis coupled proton transport1.17E-02
125GO:0048653: anther development1.17E-02
126GO:0042631: cellular response to water deprivation1.17E-02
127GO:0006520: cellular amino acid metabolic process1.24E-02
128GO:0010197: polar nucleus fusion1.24E-02
129GO:0046323: glucose import1.24E-02
130GO:0009960: endosperm development1.24E-02
131GO:0055114: oxidation-reduction process1.25E-02
132GO:0010183: pollen tube guidance1.37E-02
133GO:0000302: response to reactive oxygen species1.43E-02
134GO:0006635: fatty acid beta-oxidation1.43E-02
135GO:0032502: developmental process1.50E-02
136GO:0009416: response to light stimulus1.55E-02
137GO:0006508: proteolysis1.86E-02
138GO:0042128: nitrate assimilation2.01E-02
139GO:0006457: protein folding2.15E-02
140GO:0008219: cell death2.25E-02
141GO:0009723: response to ethylene2.28E-02
142GO:0009407: toxin catabolic process2.41E-02
143GO:0010043: response to zinc ion2.49E-02
144GO:0048527: lateral root development2.49E-02
145GO:0010200: response to chitin2.53E-02
146GO:0016192: vesicle-mediated transport2.57E-02
147GO:0046777: protein autophosphorylation2.61E-02
148GO:0045087: innate immune response2.66E-02
149GO:0006839: mitochondrial transport2.92E-02
150GO:0006886: intracellular protein transport3.01E-02
151GO:0008283: cell proliferation3.19E-02
152GO:0008643: carbohydrate transport3.37E-02
153GO:0009636: response to toxic substance3.47E-02
154GO:0006468: protein phosphorylation3.52E-02
155GO:0009751: response to salicylic acid3.55E-02
156GO:0009793: embryo development ending in seed dormancy3.57E-02
157GO:0009846: pollen germination3.75E-02
158GO:0006364: rRNA processing3.94E-02
159GO:0051603: proteolysis involved in cellular protein catabolic process4.04E-02
160GO:0009909: regulation of flower development4.24E-02
161GO:0006096: glycolytic process4.44E-02
162GO:0009620: response to fungus4.75E-02
163GO:0009553: embryo sac development4.96E-02
RankGO TermAdjusted P value
1GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group0.00E+00
2GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity0.00E+00
3GO:0004107: chorismate synthase activity0.00E+00
4GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity0.00E+00
5GO:0005046: KDEL sequence binding0.00E+00
6GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
7GO:0051287: NAD binding7.99E-08
8GO:0005507: copper ion binding6.43E-07
9GO:0004298: threonine-type endopeptidase activity6.45E-07
10GO:0004617: phosphoglycerate dehydrogenase activity1.05E-06
11GO:0008233: peptidase activity1.19E-05
12GO:0005524: ATP binding7.14E-05
13GO:0008237: metallopeptidase activity1.36E-04
14GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity1.46E-04
15GO:0004638: phosphoribosylaminoimidazole carboxylase activity1.46E-04
16GO:0004013: adenosylhomocysteinase activity1.46E-04
17GO:0080042: ADP-glucose pyrophosphohydrolase activity1.46E-04
18GO:0016597: amino acid binding1.48E-04
19GO:0003746: translation elongation factor activity3.21E-04
20GO:0004775: succinate-CoA ligase (ADP-forming) activity3.33E-04
21GO:0070361: mitochondrial light strand promoter anti-sense binding3.33E-04
22GO:0004338: glucan exo-1,3-beta-glucosidase activity3.33E-04
23GO:0004776: succinate-CoA ligase (GDP-forming) activity3.33E-04
24GO:0004634: phosphopyruvate hydratase activity3.33E-04
25GO:0080041: ADP-ribose pyrophosphohydrolase activity3.33E-04
26GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity3.33E-04
27GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity3.33E-04
28GO:0017110: nucleoside-diphosphatase activity3.33E-04
29GO:0005388: calcium-transporting ATPase activity3.41E-04
30GO:0005516: calmodulin binding3.63E-04
31GO:0004148: dihydrolipoyl dehydrogenase activity5.47E-04
32GO:0016165: linoleate 13S-lipoxygenase activity5.47E-04
33GO:0016174: NAD(P)H oxidase activity5.47E-04
34GO:0009678: hydrogen-translocating pyrophosphatase activity7.83E-04
35GO:0004449: isocitrate dehydrogenase (NAD+) activity7.83E-04
36GO:0004108: citrate (Si)-synthase activity7.83E-04
37GO:0010178: IAA-amino acid conjugate hydrolase activity7.83E-04
38GO:0017089: glycolipid transporter activity7.83E-04
39GO:0047769: arogenate dehydratase activity1.04E-03
40GO:0004664: prephenate dehydratase activity1.04E-03
41GO:0051861: glycolipid binding1.04E-03
42GO:0046923: ER retention sequence binding1.04E-03
43GO:0047631: ADP-ribose diphosphatase activity1.31E-03
44GO:0005471: ATP:ADP antiporter activity1.31E-03
45GO:0015145: monosaccharide transmembrane transporter activity1.31E-03
46GO:0000210: NAD+ diphosphatase activity1.61E-03
47GO:0051117: ATPase binding1.61E-03
48GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity1.61E-03
49GO:0030976: thiamine pyrophosphate binding1.61E-03
50GO:0008420: CTD phosphatase activity1.61E-03
51GO:0004144: diacylglycerol O-acyltransferase activity1.93E-03
52GO:0008320: protein transmembrane transporter activity2.27E-03
53GO:0016831: carboxy-lyase activity2.27E-03
54GO:0008506: sucrose:proton symporter activity2.27E-03
55GO:0008235: metalloexopeptidase activity2.27E-03
56GO:0008121: ubiquinol-cytochrome-c reductase activity2.27E-03
57GO:0005509: calcium ion binding2.30E-03
58GO:0015238: drug transmembrane transporter activity2.47E-03
59GO:0043022: ribosome binding2.63E-03
60GO:0050897: cobalt ion binding2.72E-03
61GO:0008135: translation factor activity, RNA binding3.00E-03
62GO:0005515: protein binding3.05E-03
63GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors3.40E-03
64GO:0015112: nitrate transmembrane transporter activity3.81E-03
65GO:0051537: 2 iron, 2 sulfur cluster binding4.14E-03
66GO:0004568: chitinase activity4.23E-03
67GO:0015020: glucuronosyltransferase activity4.23E-03
68GO:0004129: cytochrome-c oxidase activity4.67E-03
69GO:0046961: proton-transporting ATPase activity, rotational mechanism4.67E-03
70GO:0004177: aminopeptidase activity4.67E-03
71GO:0008139: nuclear localization sequence binding5.60E-03
72GO:0005262: calcium channel activity5.60E-03
73GO:0015114: phosphate ion transmembrane transporter activity5.60E-03
74GO:0045735: nutrient reservoir activity6.08E-03
75GO:0042973: glucan endo-1,3-beta-D-glucosidase activity6.09E-03
76GO:0008266: poly(U) RNA binding6.09E-03
77GO:0008061: chitin binding6.59E-03
78GO:0003712: transcription cofactor activity6.59E-03
79GO:0004190: aspartic-type endopeptidase activity6.59E-03
80GO:0030552: cAMP binding6.59E-03
81GO:0030553: cGMP binding6.59E-03
82GO:0080043: quercetin 3-O-glucosyltransferase activity6.68E-03
83GO:0080044: quercetin 7-O-glucosyltransferase activity6.68E-03
84GO:0005216: ion channel activity8.18E-03
85GO:0004176: ATP-dependent peptidase activity8.73E-03
86GO:0016758: transferase activity, transferring hexosyl groups8.93E-03
87GO:0008810: cellulase activity9.89E-03
88GO:0022891: substrate-specific transmembrane transporter activity9.89E-03
89GO:0008565: protein transporter activity1.10E-02
90GO:0005249: voltage-gated potassium channel activity1.17E-02
91GO:0030551: cyclic nucleotide binding1.17E-02
92GO:0005215: transporter activity1.19E-02
93GO:0015297: antiporter activity1.21E-02
94GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.24E-02
95GO:0008536: Ran GTPase binding1.24E-02
96GO:0005355: glucose transmembrane transporter activity1.30E-02
97GO:0010181: FMN binding1.30E-02
98GO:0016887: ATPase activity1.31E-02
99GO:0004872: receptor activity1.37E-02
100GO:0008194: UDP-glycosyltransferase activity1.42E-02
101GO:0000287: magnesium ion binding1.93E-02
102GO:0009931: calcium-dependent protein serine/threonine kinase activity2.01E-02
103GO:0046872: metal ion binding2.03E-02
104GO:0030247: polysaccharide binding2.09E-02
105GO:0004683: calmodulin-dependent protein kinase activity2.09E-02
106GO:0016798: hydrolase activity, acting on glycosyl bonds2.09E-02
107GO:0043531: ADP binding2.16E-02
108GO:0008236: serine-type peptidase activity2.17E-02
109GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.25E-02
110GO:0050660: flavin adenine dinucleotide binding2.28E-02
111GO:0004222: metalloendopeptidase activity2.41E-02
112GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.49E-02
113GO:0030145: manganese ion binding2.49E-02
114GO:0000987: core promoter proximal region sequence-specific DNA binding2.75E-02
115GO:0004364: glutathione transferase activity3.10E-02
116GO:0009055: electron carrier activity3.86E-02
117GO:0031625: ubiquitin protein ligase binding4.24E-02
RankGO TermAdjusted P value
1GO:0005739: mitochondrion3.00E-07
2GO:0005839: proteasome core complex6.45E-07
3GO:0005774: vacuolar membrane1.35E-06
4GO:0019773: proteasome core complex, alpha-subunit complex1.93E-06
5GO:0000502: proteasome complex3.25E-06
6GO:0005740: mitochondrial envelope4.99E-06
7GO:0005886: plasma membrane1.02E-05
8GO:0005773: vacuole1.09E-05
9GO:0005618: cell wall1.63E-05
10GO:0005801: cis-Golgi network5.87E-05
11GO:0009507: chloroplast5.93E-05
12GO:0005829: cytosol7.05E-05
13GO:0031351: integral component of plastid membrane1.46E-04
14GO:0005759: mitochondrial matrix2.57E-04
15GO:0000015: phosphopyruvate hydratase complex3.33E-04
16GO:0030134: ER to Golgi transport vesicle3.33E-04
17GO:0005758: mitochondrial intermembrane space5.33E-04
18GO:0005741: mitochondrial outer membrane6.43E-04
19GO:0016020: membrane6.90E-04
20GO:0030660: Golgi-associated vesicle membrane1.04E-03
21GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.04E-03
22GO:0016471: vacuolar proton-transporting V-type ATPase complex1.04E-03
23GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.04E-03
24GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain1.31E-03
25GO:0005743: mitochondrial inner membrane1.32E-03
26GO:0005783: endoplasmic reticulum1.43E-03
27GO:0005730: nucleolus1.87E-03
28GO:0005887: integral component of plasma membrane2.34E-03
29GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane2.63E-03
30GO:0048046: apoplast2.73E-03
31GO:0008541: proteasome regulatory particle, lid subcomplex4.67E-03
32GO:0005765: lysosomal membrane4.67E-03
33GO:0005635: nuclear envelope5.51E-03
34GO:0031012: extracellular matrix5.60E-03
35GO:0005750: mitochondrial respiratory chain complex III6.09E-03
36GO:0005747: mitochondrial respiratory chain complex I6.28E-03
37GO:0005753: mitochondrial proton-transporting ATP synthase complex6.59E-03
38GO:0070469: respiratory chain8.18E-03
39GO:0009570: chloroplast stroma9.74E-03
40GO:0009705: plant-type vacuole membrane1.27E-02
41GO:0009536: plastid1.40E-02
42GO:0022626: cytosolic ribosome1.47E-02
43GO:0005788: endoplasmic reticulum lumen1.94E-02
44GO:0005789: endoplasmic reticulum membrane1.94E-02
45GO:0000151: ubiquitin ligase complex2.25E-02
46GO:0005643: nuclear pore2.25E-02
47GO:0000325: plant-type vacuole2.49E-02
48GO:0005819: spindle2.83E-02
49GO:0090406: pollen tube3.19E-02
50GO:0005794: Golgi apparatus3.48E-02
51GO:0005737: cytoplasm3.75E-02
52GO:0009941: chloroplast envelope3.79E-02
53GO:0009506: plasmodesma4.14E-02
54GO:0016607: nuclear speck4.54E-02
55GO:0005834: heterotrimeric G-protein complex4.65E-02
56GO:0016021: integral component of membrane4.88E-02
Gene type



Gene DE type