co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G17910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035437: maintenance of protein localization in endoplasmic reticulum	0.00E+00
2	GO:0000390: spliceosomal complex disassembly	0.00E+00
3	GO:0032889: regulation of vacuole fusion, non-autophagic	0.00E+00
4	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
5	GO:0048867: stem cell fate determination	0.00E+00
6	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
7	GO:0032012: regulation of ARF protein signal transduction	4.30E-07
8	GO:0090630: activation of GTPase activity	4.30E-07
9	GO:0006897: endocytosis	3.73E-05
10	GO:0031338: regulation of vesicle fusion	4.18E-05
11	GO:1990641: response to iron ion starvation	4.18E-05
12	GO:0035542: regulation of SNARE complex assembly	1.04E-04
13	GO:0009727: detection of ethylene stimulus	1.04E-04
14	GO:0006101: citrate metabolic process	1.04E-04
15	GO:0016197: endosomal transport	1.04E-04
16	GO:0048209: regulation of vesicle targeting, to, from or within Golgi	1.04E-04
17	GO:0001736: establishment of planar polarity	1.04E-04
18	GO:0032509: endosome transport via multivesicular body sorting pathway	1.04E-04
19	GO:0006473: protein acetylation	1.78E-04
20	GO:0006013: mannose metabolic process	1.78E-04
21	GO:1900140: regulation of seedling development	1.78E-04
22	GO:0006517: protein deglycosylation	1.78E-04
23	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.78E-04
24	GO:0080119: ER body organization	2.63E-04
25	GO:0006882: cellular zinc ion homeostasis	2.63E-04
26	GO:1901000: regulation of response to salt stress	2.63E-04
27	GO:1990937: xylan acetylation	3.53E-04
28	GO:0006878: cellular copper ion homeostasis	3.53E-04
29	GO:0015743: malate transport	3.53E-04
30	GO:0043097: pyrimidine nucleoside salvage	4.50E-04
31	GO:0010119: regulation of stomatal movement	5.49E-04
32	GO:0006206: pyrimidine nucleobase metabolic process	5.51E-04
33	GO:0045491: xylan metabolic process	5.51E-04
34	GO:0050665: hydrogen peroxide biosynthetic process	5.51E-04
35	GO:0048827: phyllome development	5.51E-04
36	GO:0000911: cytokinesis by cell plate formation	6.58E-04
37	GO:0009942: longitudinal axis specification	6.58E-04
38	GO:0006886: intracellular protein transport	7.35E-04
39	GO:0006491: N-glycan processing	8.84E-04
40	GO:0006875: cellular metal ion homeostasis	8.84E-04
41	GO:0009690: cytokinin metabolic process	8.84E-04
42	GO:0006102: isocitrate metabolic process	8.84E-04
43	GO:0007155: cell adhesion	8.84E-04
44	GO:0009880: embryonic pattern specification	1.00E-03
45	GO:0048367: shoot system development	1.23E-03
46	GO:0016573: histone acetylation	1.25E-03
47	GO:0090332: stomatal closure	1.25E-03
48	GO:0006298: mismatch repair	1.39E-03
49	GO:0052544: defense response by callose deposition in cell wall	1.53E-03
50	GO:0048765: root hair cell differentiation	1.53E-03
51	GO:0000398: mRNA splicing, via spliceosome	1.63E-03
52	GO:0009908: flower development	1.64E-03
53	GO:0010152: pollen maturation	1.67E-03
54	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.67E-03
55	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.67E-03
56	GO:2000012: regulation of auxin polar transport	1.82E-03
57	GO:0002237: response to molecule of bacterial origin	1.97E-03
58	GO:0010540: basipetal auxin transport	1.97E-03
59	GO:0080188: RNA-directed DNA methylation	2.13E-03
60	GO:0007033: vacuole organization	2.13E-03
61	GO:0006289: nucleotide-excision repair	2.46E-03
62	GO:0006487: protein N-linked glycosylation	2.46E-03
63	GO:0006874: cellular calcium ion homeostasis	2.62E-03
64	GO:0010073: meristem maintenance	2.62E-03
65	GO:0006825: copper ion transport	2.62E-03
66	GO:0001944: vasculature development	3.15E-03
67	GO:0009625: response to insect	3.15E-03
68	GO:0010227: floral organ abscission	3.15E-03
69	GO:0045492: xylan biosynthetic process	3.33E-03
70	GO:0042147: retrograde transport, endosome to Golgi	3.52E-03
71	GO:0080022: primary root development	3.71E-03
72	GO:0010087: phloem or xylem histogenesis	3.71E-03
73	GO:0010154: fruit development	3.91E-03
74	GO:0010182: sugar mediated signaling pathway	3.91E-03
75	GO:0042752: regulation of circadian rhythm	4.11E-03
76	GO:0009723: response to ethylene	4.30E-03
77	GO:0010183: pollen tube guidance	4.31E-03
78	GO:0006623: protein targeting to vacuole	4.31E-03
79	GO:0048366: leaf development	4.38E-03
80	GO:0071281: cellular response to iron ion	4.93E-03
81	GO:0009651: response to salt stress	5.02E-03
82	GO:0006914: autophagy	5.15E-03
83	GO:0016579: protein deubiquitination	5.59E-03
84	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.04E-03
85	GO:0015031: protein transport	6.16E-03
86	GO:0006950: response to stress	6.50E-03
87	GO:0016049: cell growth	6.74E-03
88	GO:0010311: lateral root formation	7.22E-03
89	GO:0006811: ion transport	7.47E-03
90	GO:0009834: plant-type secondary cell wall biogenesis	7.47E-03
91	GO:0016051: carbohydrate biosynthetic process	8.23E-03
92	GO:0006099: tricarboxylic acid cycle	8.48E-03
93	GO:0009873: ethylene-activated signaling pathway	8.76E-03
94	GO:0008283: cell proliferation	9.82E-03
95	GO:0009846: pollen germination	1.15E-02
96	GO:0042538: hyperosmotic salinity response	1.15E-02
97	GO:0009737: response to abscisic acid	1.19E-02
98	GO:0006396: RNA processing	1.59E-02
99	GO:0009058: biosynthetic process	1.89E-02
100	GO:0009845: seed germination	1.93E-02
101	GO:0009790: embryo development	2.03E-02
102	GO:0016036: cellular response to phosphate starvation	2.18E-02
103	GO:0009739: response to gibberellin	2.48E-02
104	GO:0006470: protein dephosphorylation	2.52E-02
105	GO:0008380: RNA splicing	2.60E-02
106	GO:0009826: unidimensional cell growth	3.05E-02
107	GO:0006970: response to osmotic stress	3.30E-02
108	GO:0016192: vesicle-mediated transport	3.78E-02
109	GO:0009408: response to heat	4.81E-02
110	GO:0048364: root development	4.96E-02
111	GO:0006397: mRNA processing	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0010292: GTP:GDP antiporter activity	0.00E+00
2	GO:1990446: U1 snRNP binding	0.00E+00
3	GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity	0.00E+00
4	GO:0019829: cation-transporting ATPase activity	4.30E-07
5	GO:0005086: ARF guanyl-nucleotide exchange factor activity	2.02E-06
6	GO:0003994: aconitate hydratase activity	1.04E-04
7	GO:0038199: ethylene receptor activity	1.04E-04
8	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	2.63E-04
9	GO:0051740: ethylene binding	2.63E-04
10	GO:0048027: mRNA 5'-UTR binding	2.63E-04
11	GO:0005253: anion channel activity	3.53E-04
12	GO:0017137: Rab GTPase binding	4.50E-04
13	GO:0002020: protease binding	4.50E-04
14	GO:0005096: GTPase activator activity	5.01E-04
15	GO:0070300: phosphatidic acid binding	6.58E-04
16	GO:0004849: uridine kinase activity	6.58E-04
17	GO:0004559: alpha-mannosidase activity	6.58E-04
18	GO:0015140: malate transmembrane transporter activity	7.69E-04
19	GO:0004722: protein serine/threonine phosphatase activity	7.94E-04
20	GO:0004525: ribonuclease III activity	8.84E-04
21	GO:0005375: copper ion transmembrane transporter activity	1.00E-03
22	GO:0004673: protein histidine kinase activity	1.39E-03
23	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.39E-03
24	GO:0015020: glucuronosyltransferase activity	1.39E-03
25	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.82E-03
26	GO:0000155: phosphorelay sensor kinase activity	1.82E-03
27	GO:0005388: calcium-transporting ATPase activity	1.82E-03
28	GO:0003712: transcription cofactor activity	2.13E-03
29	GO:0043424: protein histidine kinase binding	2.62E-03
30	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.80E-03
31	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.80E-03
32	GO:0042802: identical protein binding	3.07E-03
33	GO:0005515: protein binding	3.30E-03
34	GO:0004402: histone acetyltransferase activity	3.71E-03
35	GO:0005524: ATP binding	3.74E-03
36	GO:0030276: clathrin binding	3.91E-03
37	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.51E-03
38	GO:0000156: phosphorelay response regulator activity	4.93E-03
39	GO:0003684: damaged DNA binding	5.15E-03
40	GO:0008375: acetylglucosaminyltransferase activity	6.27E-03
41	GO:0003697: single-stranded DNA binding	8.23E-03
42	GO:0051539: 4 iron, 4 sulfur cluster binding	9.01E-03
43	GO:0046872: metal ion binding	9.83E-03
44	GO:0003779: actin binding	1.52E-02
45	GO:0008026: ATP-dependent helicase activity	1.62E-02
46	GO:0004386: helicase activity	1.65E-02
47	GO:0005507: copper ion binding	1.72E-02
48	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.86E-02
49	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.72E-02
50	GO:0003676: nucleic acid binding	2.72E-02
51	GO:0004672: protein kinase activity	3.60E-02
52	GO:0004497: monooxygenase activity	3.65E-02
53	GO:0042803: protein homodimerization activity	4.29E-02

Rank	GO Term	Adjusted P value
1	GO:0031981: nuclear lumen	0.00E+00
2	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
3	GO:0071942: XPC complex	0.00E+00
4	GO:0000111: nucleotide-excision repair factor 2 complex	0.00E+00
5	GO:0005802: trans-Golgi network	3.35E-07
6	GO:0005768: endosome	5.22E-07
7	GO:0000139: Golgi membrane	2.09E-06
8	GO:0005794: Golgi apparatus	3.37E-05
9	GO:0010008: endosome membrane	9.04E-05
10	GO:0030897: HOPS complex	1.04E-04
11	GO:0005776: autophagosome	3.53E-04
12	GO:0034399: nuclear periphery	8.84E-04
13	GO:0030131: clathrin adaptor complex	8.84E-04
14	GO:0005681: spliceosomal complex	1.19E-03
15	GO:0015030: Cajal body	1.25E-03
16	GO:0030125: clathrin vesicle coat	1.39E-03
17	GO:0005765: lysosomal membrane	1.53E-03
18	GO:0005884: actin filament	1.53E-03
19	GO:0019013: viral nucleocapsid	1.82E-03
20	GO:0043234: protein complex	2.29E-03
21	GO:0009705: plant-type vacuole membrane	2.42E-03
22	GO:0005905: clathrin-coated pit	2.80E-03
23	GO:0031410: cytoplasmic vesicle	2.97E-03
24	GO:0030136: clathrin-coated vesicle	3.52E-03
25	GO:0005770: late endosome	3.91E-03
26	GO:0030529: intracellular ribonucleoprotein complex	5.81E-03
27	GO:0005788: endoplasmic reticulum lumen	6.04E-03
28	GO:0031902: late endosome membrane	9.28E-03
29	GO:0005829: cytosol	1.05E-02
30	GO:0005783: endoplasmic reticulum	1.52E-02
31	GO:0012505: endomembrane system	1.52E-02
32	GO:0005623: cell	1.86E-02
33	GO:0005622: intracellular	2.15E-02
34	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.34E-02
35	GO:0005789: endoplasmic reticulum membrane	3.74E-02