GO Enrichment Analysis of Co-expressed Genes with
AT5G17710
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0015995: chlorophyll biosynthetic process | 1.21E-05 |
| 3 | GO:0071482: cellular response to light stimulus | 1.49E-05 |
| 4 | GO:0006352: DNA-templated transcription, initiation | 3.37E-05 |
| 5 | GO:0006430: lysyl-tRNA aminoacylation | 3.64E-05 |
| 6 | GO:0006568: tryptophan metabolic process | 9.09E-05 |
| 7 | GO:0006695: cholesterol biosynthetic process | 9.09E-05 |
| 8 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 1.58E-04 |
| 9 | GO:0006165: nucleoside diphosphate phosphorylation | 2.33E-04 |
| 10 | GO:0006228: UTP biosynthetic process | 2.33E-04 |
| 11 | GO:0006986: response to unfolded protein | 2.33E-04 |
| 12 | GO:2001141: regulation of RNA biosynthetic process | 2.33E-04 |
| 13 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.33E-04 |
| 14 | GO:0006241: CTP biosynthetic process | 2.33E-04 |
| 15 | GO:0006457: protein folding | 3.09E-04 |
| 16 | GO:0071483: cellular response to blue light | 3.14E-04 |
| 17 | GO:0006183: GTP biosynthetic process | 3.14E-04 |
| 18 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.01E-04 |
| 19 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 6.87E-04 |
| 20 | GO:0042255: ribosome assembly | 7.90E-04 |
| 21 | GO:0006353: DNA-templated transcription, termination | 7.90E-04 |
| 22 | GO:0048564: photosystem I assembly | 7.90E-04 |
| 23 | GO:0045292: mRNA cis splicing, via spliceosome | 7.90E-04 |
| 24 | GO:0009657: plastid organization | 8.97E-04 |
| 25 | GO:0045337: farnesyl diphosphate biosynthetic process | 1.01E-03 |
| 26 | GO:0033384: geranyl diphosphate biosynthetic process | 1.01E-03 |
| 27 | GO:0000373: Group II intron splicing | 1.01E-03 |
| 28 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.12E-03 |
| 29 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.24E-03 |
| 30 | GO:0045036: protein targeting to chloroplast | 1.24E-03 |
| 31 | GO:0009073: aromatic amino acid family biosynthetic process | 1.36E-03 |
| 32 | GO:0006633: fatty acid biosynthetic process | 1.86E-03 |
| 33 | GO:0090351: seedling development | 1.89E-03 |
| 34 | GO:0009451: RNA modification | 2.09E-03 |
| 35 | GO:0007017: microtubule-based process | 2.33E-03 |
| 36 | GO:0008299: isoprenoid biosynthetic process | 2.33E-03 |
| 37 | GO:0006418: tRNA aminoacylation for protein translation | 2.33E-03 |
| 38 | GO:0009411: response to UV | 2.80E-03 |
| 39 | GO:0009658: chloroplast organization | 3.13E-03 |
| 40 | GO:0008033: tRNA processing | 3.30E-03 |
| 41 | GO:0007018: microtubule-based movement | 3.64E-03 |
| 42 | GO:0016032: viral process | 4.19E-03 |
| 43 | GO:0032502: developmental process | 4.19E-03 |
| 44 | GO:0015979: photosynthesis | 4.41E-03 |
| 45 | GO:0048481: plant ovule development | 6.18E-03 |
| 46 | GO:0007568: aging | 6.83E-03 |
| 47 | GO:0009637: response to blue light | 7.28E-03 |
| 48 | GO:0006412: translation | 7.45E-03 |
| 49 | GO:0030001: metal ion transport | 7.97E-03 |
| 50 | GO:0006631: fatty acid metabolic process | 8.21E-03 |
| 51 | GO:0042542: response to hydrogen peroxide | 8.44E-03 |
| 52 | GO:0010114: response to red light | 8.68E-03 |
| 53 | GO:0009735: response to cytokinin | 9.23E-03 |
| 54 | GO:0009585: red, far-red light phototransduction | 1.07E-02 |
| 55 | GO:0009624: response to nematode | 1.37E-02 |
| 56 | GO:0008380: RNA splicing | 2.29E-02 |
| 57 | GO:0042254: ribosome biogenesis | 2.80E-02 |
| 58 | GO:0032259: methylation | 4.12E-02 |
| 59 | GO:0006629: lipid metabolic process | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0001053: plastid sigma factor activity | 1.60E-06 |
| 3 | GO:0016987: sigma factor activity | 1.60E-06 |
| 4 | GO:0019843: rRNA binding | 4.83E-06 |
| 5 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 3.64E-05 |
| 6 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 3.64E-05 |
| 7 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 3.64E-05 |
| 8 | GO:0004824: lysine-tRNA ligase activity | 3.64E-05 |
| 9 | GO:0051087: chaperone binding | 8.79E-05 |
| 10 | GO:0016630: protochlorophyllide reductase activity | 9.09E-05 |
| 11 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 9.09E-05 |
| 12 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 1.58E-04 |
| 13 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 1.58E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 2.33E-04 |
| 15 | GO:0004550: nucleoside diphosphate kinase activity | 2.33E-04 |
| 16 | GO:0016836: hydro-lyase activity | 3.14E-04 |
| 17 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 3.14E-04 |
| 18 | GO:0003959: NADPH dehydrogenase activity | 4.01E-04 |
| 19 | GO:0102391: decanoate--CoA ligase activity | 5.88E-04 |
| 20 | GO:0004467: long-chain fatty acid-CoA ligase activity | 6.87E-04 |
| 21 | GO:0016831: carboxy-lyase activity | 6.87E-04 |
| 22 | GO:0008312: 7S RNA binding | 7.90E-04 |
| 23 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.60E-04 |
| 24 | GO:0003723: RNA binding | 9.26E-04 |
| 25 | GO:0004337: geranyltranstransferase activity | 1.01E-03 |
| 26 | GO:0047617: acyl-CoA hydrolase activity | 1.12E-03 |
| 27 | GO:0051082: unfolded protein binding | 1.20E-03 |
| 28 | GO:0004161: dimethylallyltranstransferase activity | 1.36E-03 |
| 29 | GO:0003735: structural constituent of ribosome | 1.73E-03 |
| 30 | GO:0008266: poly(U) RNA binding | 1.76E-03 |
| 31 | GO:0003727: single-stranded RNA binding | 2.96E-03 |
| 32 | GO:0004812: aminoacyl-tRNA ligase activity | 3.13E-03 |
| 33 | GO:0008080: N-acetyltransferase activity | 3.47E-03 |
| 34 | GO:0005200: structural constituent of cytoskeleton | 4.75E-03 |
| 35 | GO:0008483: transaminase activity | 4.75E-03 |
| 36 | GO:0004519: endonuclease activity | 6.19E-03 |
| 37 | GO:0003746: translation elongation factor activity | 7.28E-03 |
| 38 | GO:0016887: ATPase activity | 8.81E-03 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.68E-03 |
| 40 | GO:0003690: double-stranded DNA binding | 1.10E-02 |
| 41 | GO:0003777: microtubule motor activity | 1.15E-02 |
| 42 | GO:0005525: GTP binding | 1.67E-02 |
| 43 | GO:0030170: pyridoxal phosphate binding | 1.73E-02 |
| 44 | GO:0008017: microtubule binding | 2.09E-02 |
| 45 | GO:0008168: methyltransferase activity | 2.69E-02 |
| 46 | GO:0000287: magnesium ion binding | 2.72E-02 |
| 47 | GO:0004601: peroxidase activity | 2.76E-02 |
| 48 | GO:0016788: hydrolase activity, acting on ester bonds | 2.80E-02 |
| 49 | GO:0003729: mRNA binding | 3.06E-02 |
| 50 | GO:0042803: protein homodimerization activity | 3.78E-02 |
| 51 | GO:0003924: GTPase activity | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.30E-28 |
| 2 | GO:0009570: chloroplast stroma | 3.00E-16 |
| 3 | GO:0009941: chloroplast envelope | 3.74E-13 |
| 4 | GO:0009547: plastid ribosome | 3.64E-05 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 9.09E-05 |
| 6 | GO:0010007: magnesium chelatase complex | 1.58E-04 |
| 7 | GO:0009579: thylakoid | 2.72E-04 |
| 8 | GO:0005840: ribosome | 6.63E-04 |
| 9 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 8.97E-04 |
| 10 | GO:0045298: tubulin complex | 1.01E-03 |
| 11 | GO:0000311: plastid large ribosomal subunit | 1.49E-03 |
| 12 | GO:0000312: plastid small ribosomal subunit | 1.76E-03 |
| 13 | GO:0005759: mitochondrial matrix | 1.86E-03 |
| 14 | GO:0009534: chloroplast thylakoid | 1.89E-03 |
| 15 | GO:0009535: chloroplast thylakoid membrane | 2.07E-03 |
| 16 | GO:0042651: thylakoid membrane | 2.33E-03 |
| 17 | GO:0009532: plastid stroma | 2.48E-03 |
| 18 | GO:0005871: kinesin complex | 3.13E-03 |
| 19 | GO:0031969: chloroplast membrane | 3.87E-03 |
| 20 | GO:0009536: plastid | 4.69E-03 |
| 21 | GO:0009295: nucleoid | 4.75E-03 |
| 22 | GO:0043231: intracellular membrane-bounded organelle | 6.27E-03 |
| 23 | GO:0016020: membrane | 1.48E-02 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 1.61E-02 |
| 25 | GO:0005623: cell | 1.64E-02 |
| 26 | GO:0005618: cell wall | 2.08E-02 |
| 27 | GO:0022627: cytosolic small ribosomal subunit | 2.47E-02 |
| 28 | GO:0005874: microtubule | 3.14E-02 |
| 29 | GO:0022625: cytosolic large ribosomal subunit | 3.34E-02 |
| 30 | GO:0005743: mitochondrial inner membrane | 4.03E-02 |