Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G16820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0005997: xylulose metabolic process0.00E+00
2GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
3GO:0071311: cellular response to acetate0.00E+00
4GO:0071260: cellular response to mechanical stimulus0.00E+00
5GO:1904962: plastid to vacuole vesicle-mediated transport0.00E+00
6GO:0042906: xanthine transport0.00E+00
7GO:0009877: nodulation0.00E+00
8GO:0044249: cellular biosynthetic process0.00E+00
9GO:0071211: protein targeting to vacuole involved in autophagy0.00E+00
10GO:0010219: regulation of vernalization response0.00E+00
11GO:0030644: cellular chloride ion homeostasis0.00E+00
12GO:0010378: temperature compensation of the circadian clock0.00E+00
13GO:0009645: response to low light intensity stimulus4.17E-06
14GO:0007623: circadian rhythm2.48E-05
15GO:0010600: regulation of auxin biosynthetic process5.05E-05
16GO:0018298: protein-chromophore linkage7.51E-05
17GO:0010218: response to far red light9.01E-05
18GO:0006970: response to osmotic stress9.24E-05
19GO:0009768: photosynthesis, light harvesting in photosystem I1.06E-04
20GO:0010244: response to low fluence blue light stimulus by blue low-fluence system1.60E-04
21GO:0010114: response to red light1.82E-04
22GO:0009409: response to cold2.07E-04
23GO:0009644: response to high light intensity2.08E-04
24GO:0009416: response to light stimulus2.43E-04
25GO:0010928: regulation of auxin mediated signaling pathway2.66E-04
26GO:0070574: cadmium ion transmembrane transport2.75E-04
27GO:0080065: 4-alpha-methyl-delta7-sterol oxidation2.75E-04
28GO:1900060: negative regulation of ceramide biosynthetic process2.75E-04
29GO:0010362: negative regulation of anion channel activity by blue light2.75E-04
30GO:0055071: manganese ion homeostasis2.75E-04
31GO:0015812: gamma-aminobutyric acid transport2.75E-04
32GO:0032958: inositol phosphate biosynthetic process2.75E-04
33GO:0006369: termination of RNA polymerase II transcription2.75E-04
34GO:0035556: intracellular signal transduction2.77E-04
35GO:0009414: response to water deprivation3.24E-04
36GO:0010286: heat acclimation4.58E-04
37GO:0009641: shade avoidance5.46E-04
38GO:0030003: cellular cation homeostasis6.04E-04
39GO:0035335: peptidyl-tyrosine dephosphorylation6.04E-04
40GO:0090156: cellular sphingolipid homeostasis6.04E-04
41GO:0015914: phospholipid transport6.04E-04
42GO:0015720: allantoin transport6.04E-04
43GO:0010155: regulation of proton transport6.04E-04
44GO:0006883: cellular sodium ion homeostasis6.04E-04
45GO:0048833: specification of floral organ number6.04E-04
46GO:0015857: uracil transport6.04E-04
47GO:1902884: positive regulation of response to oxidative stress6.04E-04
48GO:0048255: mRNA stabilization6.04E-04
49GO:0051170: nuclear import6.04E-04
50GO:0034755: iron ion transmembrane transport6.04E-04
51GO:0006816: calcium ion transport6.30E-04
52GO:0009737: response to abscisic acid7.24E-04
53GO:0009817: defense response to fungus, incompatible interaction7.45E-04
54GO:0000160: phosphorelay signal transduction system7.93E-04
55GO:0071705: nitrogen compound transport9.79E-04
56GO:0030029: actin filament-based process9.79E-04
57GO:0015692: lead ion transport9.79E-04
58GO:1902448: positive regulation of shade avoidance9.79E-04
59GO:0042344: indole glucosinolate catabolic process9.79E-04
60GO:0071230: cellular response to amino acid stimulus9.79E-04
61GO:1901562: response to paraquat9.79E-04
62GO:0006598: polyamine catabolic process9.79E-04
63GO:0009637: response to blue light1.00E-03
64GO:0009640: photomorphogenesis1.37E-03
65GO:0006874: cellular calcium ion homeostasis1.38E-03
66GO:0006020: inositol metabolic process1.40E-03
67GO:0010601: positive regulation of auxin biosynthetic process1.40E-03
68GO:0015749: monosaccharide transport1.40E-03
69GO:1901332: negative regulation of lateral root development1.40E-03
70GO:0008643: carbohydrate transport1.51E-03
71GO:0048511: rhythmic process1.52E-03
72GO:0009269: response to desiccation1.52E-03
73GO:0010017: red or far-red light signaling pathway1.66E-03
74GO:0006646: phosphatidylethanolamine biosynthetic process1.87E-03
75GO:0071421: manganese ion transmembrane transport1.87E-03
76GO:0048442: sepal development1.87E-03
77GO:0009765: photosynthesis, light harvesting1.87E-03
78GO:1901002: positive regulation of response to salt stress1.87E-03
79GO:0030104: water homeostasis1.87E-03
80GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain1.87E-03
81GO:0048443: stamen development1.97E-03
82GO:0009585: red, far-red light phototransduction2.00E-03
83GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.13E-03
84GO:0009651: response to salt stress2.33E-03
85GO:0006656: phosphatidylcholine biosynthetic process2.39E-03
86GO:0043097: pyrimidine nucleoside salvage2.39E-03
87GO:0016123: xanthophyll biosynthetic process2.39E-03
88GO:0048578: positive regulation of long-day photoperiodism, flowering2.39E-03
89GO:0009904: chloroplast accumulation movement2.39E-03
90GO:0006814: sodium ion transport2.67E-03
91GO:0000741: karyogamy2.95E-03
92GO:0015691: cadmium ion transport2.95E-03
93GO:0042732: D-xylose metabolic process2.95E-03
94GO:0006828: manganese ion transport2.95E-03
95GO:0006206: pyrimidine nucleobase metabolic process2.95E-03
96GO:0080167: response to karrikin3.23E-03
97GO:0009903: chloroplast avoidance movement3.55E-03
98GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.55E-03
99GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.55E-03
100GO:0019509: L-methionine salvage from methylthioadenosine3.55E-03
101GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity3.55E-03
102GO:0044550: secondary metabolite biosynthetic process3.67E-03
103GO:0010038: response to metal ion4.19E-03
104GO:0010044: response to aluminum ion4.19E-03
105GO:0010161: red light signaling pathway4.19E-03
106GO:0009395: phospholipid catabolic process4.19E-03
107GO:0048437: floral organ development4.19E-03
108GO:0009769: photosynthesis, light harvesting in photosystem II4.19E-03
109GO:0010029: regulation of seed germination4.67E-03
110GO:0070413: trehalose metabolism in response to stress4.86E-03
111GO:0006875: cellular metal ion homeostasis4.86E-03
112GO:0009061: anaerobic respiration4.86E-03
113GO:0009415: response to water4.86E-03
114GO:0010078: maintenance of root meristem identity4.86E-03
115GO:0009704: de-etiolation4.86E-03
116GO:0010099: regulation of photomorphogenesis5.57E-03
117GO:0009827: plant-type cell wall modification5.57E-03
118GO:0006098: pentose-phosphate shunt6.31E-03
119GO:0034765: regulation of ion transmembrane transport6.31E-03
120GO:0090333: regulation of stomatal closure6.31E-03
121GO:0046916: cellular transition metal ion homeostasis6.31E-03
122GO:0006811: ion transport6.35E-03
123GO:0009631: cold acclimation6.66E-03
124GO:0009638: phototropism7.09E-03
125GO:0048354: mucilage biosynthetic process involved in seed coat development7.09E-03
126GO:0010468: regulation of gene expression7.87E-03
127GO:0009688: abscisic acid biosynthetic process7.90E-03
128GO:0010162: seed dormancy process7.90E-03
129GO:0055062: phosphate ion homeostasis7.90E-03
130GO:0007064: mitotic sister chromatid cohesion7.90E-03
131GO:0048441: petal development7.90E-03
132GO:0030001: metal ion transport8.33E-03
133GO:0030148: sphingolipid biosynthetic process8.74E-03
134GO:0046856: phosphatidylinositol dephosphorylation8.74E-03
135GO:0009682: induced systemic resistance8.74E-03
136GO:0052544: defense response by callose deposition in cell wall8.74E-03
137GO:0042542: response to hydrogen peroxide9.05E-03
138GO:0016925: protein sumoylation9.61E-03
139GO:0050826: response to freezing1.05E-02
140GO:0009718: anthocyanin-containing compound biosynthetic process1.05E-02
141GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.05E-02
142GO:0009785: blue light signaling pathway1.05E-02
143GO:0000165: MAPK cascade1.14E-02
144GO:0009266: response to temperature stimulus1.14E-02
145GO:0048440: carpel development1.14E-02
146GO:0007034: vacuolar transport1.14E-02
147GO:0090351: seedling development1.24E-02
148GO:0019853: L-ascorbic acid biosynthetic process1.24E-02
149GO:0071732: cellular response to nitric oxide1.24E-02
150GO:0006813: potassium ion transport1.27E-02
151GO:0051603: proteolysis involved in cellular protein catabolic process1.32E-02
152GO:0009738: abscisic acid-activated signaling pathway1.33E-02
153GO:0034976: response to endoplasmic reticulum stress1.34E-02
154GO:0005992: trehalose biosynthetic process1.44E-02
155GO:0016575: histone deacetylation1.55E-02
156GO:0009695: jasmonic acid biosynthetic process1.55E-02
157GO:0010431: seed maturation1.65E-02
158GO:0003333: amino acid transmembrane transport1.65E-02
159GO:0007165: signal transduction1.67E-02
160GO:0015979: photosynthesis1.71E-02
161GO:0019748: secondary metabolic process1.76E-02
162GO:0045892: negative regulation of transcription, DNA-templated1.85E-02
163GO:0071369: cellular response to ethylene stimulus1.88E-02
164GO:0006012: galactose metabolic process1.88E-02
165GO:0009693: ethylene biosynthetic process1.88E-02
166GO:0071215: cellular response to abscisic acid stimulus1.88E-02
167GO:0019722: calcium-mediated signaling1.99E-02
168GO:0070417: cellular response to cold2.11E-02
169GO:0034220: ion transmembrane transport2.23E-02
170GO:0080022: primary root development2.23E-02
171GO:0010197: polar nucleus fusion2.35E-02
172GO:0010182: sugar mediated signaling pathway2.35E-02
173GO:0046323: glucose import2.35E-02
174GO:0009960: endosperm development2.35E-02
175GO:0009408: response to heat2.36E-02
176GO:0006355: regulation of transcription, DNA-templated2.43E-02
177GO:0061025: membrane fusion2.47E-02
178GO:0042752: regulation of circadian rhythm2.47E-02
179GO:0008654: phospholipid biosynthetic process2.60E-02
180GO:0009556: microsporogenesis2.60E-02
181GO:0055072: iron ion homeostasis2.60E-02
182GO:0005975: carbohydrate metabolic process2.64E-02
183GO:0006635: fatty acid beta-oxidation2.73E-02
184GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.73E-02
185GO:0006413: translational initiation2.93E-02
186GO:1901657: glycosyl compound metabolic process2.99E-02
187GO:0071281: cellular response to iron ion2.99E-02
188GO:0019760: glucosinolate metabolic process3.13E-02
189GO:0009739: response to gibberellin3.51E-02
190GO:0016126: sterol biosynthetic process3.55E-02
191GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.69E-02
192GO:0009617: response to bacterium3.75E-02
193GO:0042742: defense response to bacterium3.95E-02
194GO:0048573: photoperiodism, flowering3.99E-02
195GO:0015995: chlorophyll biosynthetic process3.99E-02
196GO:0009908: flower development4.24E-02
197GO:0009813: flavonoid biosynthetic process4.44E-02
198GO:0010119: regulation of stomatal movement4.75E-02
RankGO TermAdjusted P value
1GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
2GO:0047668: amygdalin beta-glucosidase activity0.00E+00
3GO:0019912: cyclin-dependent protein kinase activating kinase activity0.00E+00
4GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
5GO:0005272: sodium channel activity0.00E+00
6GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
7GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
8GO:0042907: xanthine transmembrane transporter activity0.00E+00
9GO:0010349: L-galactose dehydrogenase activity0.00E+00
10GO:0009045: xylose isomerase activity0.00E+00
11GO:0080082: esculin beta-glucosidase activity0.00E+00
12GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity0.00E+00
13GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
14GO:0004567: beta-mannosidase activity0.00E+00
15GO:0015276: ligand-gated ion channel activity0.00E+00
16GO:0031409: pigment binding7.75E-05
17GO:0070300: phosphatidic acid binding1.60E-04
18GO:0033857: diphosphoinositol-pentakisphosphate kinase activity2.75E-04
19GO:0009679: hexose:proton symporter activity2.75E-04
20GO:0000829: inositol heptakisphosphate kinase activity2.75E-04
21GO:0080079: cellobiose glucosidase activity2.75E-04
22GO:0017091: AU-rich element binding2.75E-04
23GO:0008692: 3-hydroxybutyryl-CoA epimerase activity2.75E-04
24GO:0046870: cadmium ion binding2.75E-04
25GO:0004856: xylulokinase activity2.75E-04
26GO:0008066: glutamate receptor activity2.75E-04
27GO:0000828: inositol hexakisphosphate kinase activity2.75E-04
28GO:0015185: gamma-aminobutyric acid transmembrane transporter activity2.75E-04
29GO:0005244: voltage-gated ion channel activity2.75E-04
30GO:0005267: potassium channel activity3.27E-04
31GO:0000989: transcription factor activity, transcription factor binding3.94E-04
32GO:0016168: chlorophyll binding5.71E-04
33GO:0032791: lead ion binding6.04E-04
34GO:0005274: allantoin uptake transmembrane transporter activity6.04E-04
35GO:0004609: phosphatidylserine decarboxylase activity6.04E-04
36GO:0047216: inositol 3-alpha-galactosyltransferase activity6.04E-04
37GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity6.04E-04
38GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity6.04E-04
39GO:0016314: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity6.04E-04
40GO:0015180: L-alanine transmembrane transporter activity6.04E-04
41GO:0008270: zinc ion binding7.21E-04
42GO:0005262: calcium channel activity8.15E-04
43GO:0005515: protein binding9.08E-04
44GO:0046592: polyamine oxidase activity9.79E-04
45GO:0005483: soluble NSF attachment protein activity9.79E-04
46GO:0019948: SUMO activating enzyme activity9.79E-04
47GO:0017150: tRNA dihydrouridine synthase activity9.79E-04
48GO:0005217: intracellular ligand-gated ion channel activity1.02E-03
49GO:0004970: ionotropic glutamate receptor activity1.02E-03
50GO:0052866: phosphatidylinositol phosphate phosphatase activity1.40E-03
51GO:0009882: blue light photoreceptor activity1.40E-03
52GO:0004165: dodecenoyl-CoA delta-isomerase activity1.40E-03
53GO:0004300: enoyl-CoA hydratase activity1.40E-03
54GO:0015189: L-lysine transmembrane transporter activity1.40E-03
55GO:0000254: C-4 methylsterol oxidase activity1.40E-03
56GO:0015086: cadmium ion transmembrane transporter activity1.40E-03
57GO:0015181: arginine transmembrane transporter activity1.40E-03
58GO:0004707: MAP kinase activity1.52E-03
59GO:0019905: syntaxin binding1.87E-03
60GO:0015210: uracil transmembrane transporter activity1.87E-03
61GO:0005313: L-glutamate transmembrane transporter activity1.87E-03
62GO:0008526: phosphatidylinositol transporter activity1.87E-03
63GO:0005253: anion channel activity1.87E-03
64GO:0015145: monosaccharide transmembrane transporter activity2.39E-03
65GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.39E-03
66GO:0016773: phosphotransferase activity, alcohol group as acceptor2.39E-03
67GO:0005247: voltage-gated chloride channel activity2.95E-03
68GO:0004629: phospholipase C activity2.95E-03
69GO:0019137: thioglucosidase activity2.95E-03
70GO:0000293: ferric-chelate reductase activity2.95E-03
71GO:0016301: kinase activity3.37E-03
72GO:0000156: phosphorelay response regulator activity3.48E-03
73GO:0004849: uridine kinase activity3.55E-03
74GO:0004435: phosphatidylinositol phospholipase C activity3.55E-03
75GO:0005261: cation channel activity3.55E-03
76GO:0015103: inorganic anion transmembrane transporter activity4.19E-03
77GO:0004525: ribonuclease III activity4.86E-03
78GO:0004033: aldo-keto reductase (NADP) activity4.86E-03
79GO:0102483: scopolin beta-glucosidase activity5.20E-03
80GO:0015144: carbohydrate transmembrane transporter activity5.24E-03
81GO:0001104: RNA polymerase II transcription cofactor activity5.57E-03
82GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity5.57E-03
83GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)5.57E-03
84GO:0005351: sugar:proton symporter activity6.10E-03
85GO:0008138: protein tyrosine/serine/threonine phosphatase activity6.31E-03
86GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity6.31E-03
87GO:0071949: FAD binding6.31E-03
88GO:0004693: cyclin-dependent protein serine/threonine kinase activity6.35E-03
89GO:0005384: manganese ion transmembrane transporter activity7.09E-03
90GO:0005381: iron ion transmembrane transporter activity7.09E-03
91GO:0004805: trehalose-phosphatase activity7.90E-03
92GO:0008422: beta-glucosidase activity7.98E-03
93GO:0004672: protein kinase activity8.52E-03
94GO:0047372: acylglycerol lipase activity8.74E-03
95GO:0005315: inorganic phosphate transmembrane transporter activity1.05E-02
96GO:0000155: phosphorelay sensor kinase activity1.05E-02
97GO:0004565: beta-galactosidase activity1.05E-02
98GO:0008081: phosphoric diester hydrolase activity1.05E-02
99GO:0031624: ubiquitin conjugating enzyme binding1.14E-02
100GO:0008131: primary amine oxidase activity1.14E-02
101GO:0003712: transcription cofactor activity1.24E-02
102GO:0004725: protein tyrosine phosphatase activity1.34E-02
103GO:0004407: histone deacetylase activity1.44E-02
104GO:0004674: protein serine/threonine kinase activity1.53E-02
105GO:0005215: transporter activity1.54E-02
106GO:0019706: protein-cysteine S-palmitoyltransferase activity1.65E-02
107GO:0022891: substrate-specific transmembrane transporter activity1.88E-02
108GO:0008514: organic anion transmembrane transporter activity1.99E-02
109GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.00E-02
110GO:0046872: metal ion binding2.22E-02
111GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.34E-02
112GO:0046873: metal ion transmembrane transporter activity2.35E-02
113GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity2.35E-02
114GO:0016853: isomerase activity2.47E-02
115GO:0010181: FMN binding2.47E-02
116GO:0004197: cysteine-type endopeptidase activity2.86E-02
117GO:0015297: antiporter activity3.00E-02
118GO:0016791: phosphatase activity3.13E-02
119GO:0005200: structural constituent of cytoskeleton3.27E-02
120GO:0003743: translation initiation factor activity3.67E-02
121GO:0005506: iron ion binding3.86E-02
122GO:0050897: cobalt ion binding4.75E-02
RankGO TermAdjusted P value
1GO:0009898: cytoplasmic side of plasma membrane5.05E-05
2GO:0016021: integral component of membrane5.34E-05
3GO:0030076: light-harvesting complex6.53E-05
4GO:0005851: eukaryotic translation initiation factor 2B complex1.17E-04
5GO:0009522: photosystem I2.73E-04
6GO:0035339: SPOTS complex2.75E-04
7GO:0010287: plastoglobule6.80E-04
8GO:0000323: lytic vacuole1.40E-03
9GO:0032586: protein storage vacuole membrane1.87E-03
10GO:0009517: PSII associated light-harvesting complex II1.87E-03
11GO:0009523: photosystem II2.86E-03
12GO:0070847: core mediator complex2.95E-03
13GO:0034707: chloride channel complex2.95E-03
14GO:0000815: ESCRT III complex3.55E-03
15GO:0009986: cell surface4.19E-03
16GO:0005777: peroxisome4.83E-03
17GO:0009941: chloroplast envelope5.52E-03
18GO:0000326: protein storage vacuole5.57E-03
19GO:0000307: cyclin-dependent protein kinase holoenzyme complex5.57E-03
20GO:0000151: ubiquitin ligase complex5.76E-03
21GO:0005886: plasma membrane5.78E-03
22GO:0010494: cytoplasmic stress granule6.31E-03
23GO:0005773: vacuole7.48E-03
24GO:0005764: lysosome1.14E-02
25GO:0031966: mitochondrial membrane1.19E-02
26GO:0016020: membrane1.33E-02
27GO:0031969: chloroplast membrane1.44E-02
28GO:0005783: endoplasmic reticulum1.48E-02
29GO:0009579: thylakoid1.82E-02
30GO:0009535: chloroplast thylakoid membrane1.92E-02
31GO:0005623: cell2.34E-02
32GO:0031965: nuclear membrane2.60E-02
33GO:0016592: mediator complex2.86E-02
34GO:0005622: intracellular3.27E-02
35GO:0000932: P-body3.55E-02
36GO:0005737: cytoplasm3.55E-02
37GO:0005774: vacuolar membrane4.30E-02
Gene type



Gene DE type