co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G16250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006949: syncytium formation	2.99E-05
2	GO:1901599: (-)-pinoresinol biosynthetic process	3.77E-05
3	GO:0060627: regulation of vesicle-mediated transport	3.77E-05
4	GO:0006869: lipid transport	6.49E-05
5	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.25E-04
6	GO:0006065: UDP-glucuronate biosynthetic process	1.63E-04
7	GO:0010583: response to cyclopentenone	2.37E-04
8	GO:0009828: plant-type cell wall loosening	2.70E-04
9	GO:0000919: cell plate assembly	3.24E-04
10	GO:0009956: radial pattern formation	3.24E-04
11	GO:0009826: unidimensional cell growth	3.46E-04
12	GO:0007094: mitotic spindle assembly checkpoint	4.13E-04
13	GO:0009834: plant-type secondary cell wall biogenesis	4.63E-04
14	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.07E-04
15	GO:1901259: chloroplast rRNA processing	6.05E-04
16	GO:0006694: steroid biosynthetic process	6.05E-04
17	GO:0048444: floral organ morphogenesis	6.05E-04
18	GO:0009955: adaxial/abaxial pattern specification	6.05E-04
19	GO:0071669: plant-type cell wall organization or biogenesis	7.07E-04
20	GO:0050790: regulation of catalytic activity	7.07E-04
21	GO:0009664: plant-type cell wall organization	8.40E-04
22	GO:0006526: arginine biosynthetic process	9.23E-04
23	GO:0032544: plastid translation	9.23E-04
24	GO:0009808: lignin metabolic process	9.23E-04
25	GO:0007346: regulation of mitotic cell cycle	1.15E-03
26	GO:0009807: lignan biosynthetic process	1.40E-03
27	GO:0010015: root morphogenesis	1.40E-03
28	GO:0055114: oxidation-reduction process	1.62E-03
29	GO:0009933: meristem structural organization	1.81E-03
30	GO:0009934: regulation of meristem structural organization	1.81E-03
31	GO:0045490: pectin catabolic process	2.13E-03
32	GO:0051302: regulation of cell division	2.40E-03
33	GO:0048278: vesicle docking	2.56E-03
34	GO:0019722: calcium-mediated signaling	3.05E-03
35	GO:0042335: cuticle development	3.40E-03
36	GO:0000271: polysaccharide biosynthetic process	3.40E-03
37	GO:0010305: leaf vascular tissue pattern formation	3.58E-03
38	GO:0006520: cellular amino acid metabolic process	3.58E-03
39	GO:0061025: membrane fusion	3.76E-03
40	GO:0016132: brassinosteroid biosynthetic process	4.13E-03
41	GO:0007264: small GTPase mediated signal transduction	4.32E-03
42	GO:0045454: cell redox homeostasis	4.84E-03
43	GO:0007267: cell-cell signaling	4.90E-03
44	GO:0006886: intracellular protein transport	4.99E-03
45	GO:0006906: vesicle fusion	5.73E-03
46	GO:0015995: chlorophyll biosynthetic process	5.94E-03
47	GO:0030244: cellulose biosynthetic process	6.38E-03
48	GO:0009832: plant-type cell wall biogenesis	6.60E-03
49	GO:0009813: flavonoid biosynthetic process	6.60E-03
50	GO:0007568: aging	7.05E-03
51	GO:0006887: exocytosis	8.47E-03
52	GO:0006631: fatty acid metabolic process	8.47E-03
53	GO:0051707: response to other organism	8.96E-03
54	GO:0042546: cell wall biogenesis	9.22E-03
55	GO:0009735: response to cytokinin	9.66E-03
56	GO:0042538: hyperosmotic salinity response	1.05E-02
57	GO:0009809: lignin biosynthetic process	1.11E-02
58	GO:0051603: proteolysis involved in cellular protein catabolic process	1.13E-02
59	GO:0051301: cell division	1.15E-02
60	GO:0048367: shoot system development	1.27E-02
61	GO:0006633: fatty acid biosynthetic process	1.95E-02
62	GO:0071555: cell wall organization	2.15E-02
63	GO:0009409: response to cold	2.91E-02
64	GO:0006970: response to osmotic stress	3.01E-02
65	GO:0007049: cell cycle	3.08E-02
66	GO:0046686: response to cadmium ion	3.35E-02
67	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.40E-02

Rank	GO Term	Adjusted P value
1	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
2	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
3	GO:0050614: delta24-sterol reductase activity	0.00E+00
4	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
5	GO:0051920: peroxiredoxin activity	6.56E-06
6	GO:0016209: antioxidant activity	1.21E-05
7	GO:0009374: biotin binding	3.77E-05
8	GO:0042349: guiding stereospecific synthesis activity	3.77E-05
9	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	3.77E-05
10	GO:0030570: pectate lyase activity	1.25E-04
11	GO:0008289: lipid binding	1.45E-04
12	GO:0005504: fatty acid binding	1.63E-04
13	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.63E-04
14	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.63E-04
15	GO:0045430: chalcone isomerase activity	3.24E-04
16	GO:0046527: glucosyltransferase activity	3.24E-04
17	GO:0003989: acetyl-CoA carboxylase activity	4.13E-04
18	GO:0051753: mannan synthase activity	6.05E-04
19	GO:0051287: NAD binding	8.11E-04
20	GO:0052747: sinapyl alcohol dehydrogenase activity	8.13E-04
21	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.53E-03
22	GO:0005507: copper ion binding	2.46E-03
23	GO:0016760: cellulose synthase (UDP-forming) activity	2.89E-03
24	GO:0004601: peroxidase activity	3.27E-03
25	GO:0005199: structural constituent of cell wall	3.58E-03
26	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.90E-03
27	GO:0003924: GTPase activity	5.96E-03
28	GO:0009055: electron carrier activity	6.39E-03
29	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.05E-03
30	GO:0030145: manganese ion binding	7.05E-03
31	GO:0000149: SNARE binding	7.99E-03
32	GO:0005484: SNAP receptor activity	8.96E-03
33	GO:0004185: serine-type carboxypeptidase activity	8.96E-03
34	GO:0045735: nutrient reservoir activity	1.24E-02
35	GO:0004650: polygalacturonase activity	1.33E-02
36	GO:0030599: pectinesterase activity	1.36E-02
37	GO:0005516: calmodulin binding	1.59E-02
38	GO:0019843: rRNA binding	1.66E-02
39	GO:0005525: GTP binding	1.74E-02
40	GO:0016829: lyase activity	1.76E-02
41	GO:0042802: identical protein binding	2.48E-02
42	GO:0016491: oxidoreductase activity	2.83E-02
43	GO:0050660: flavin adenine dinucleotide binding	3.16E-02
44	GO:0042803: protein homodimerization activity	3.91E-02
45	GO:0004871: signal transducer activity	3.91E-02
46	GO:0003735: structural constituent of ribosome	4.26E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	2.75E-10
2	GO:0046658: anchored component of plasma membrane	1.56E-08
3	GO:0048046: apoplast	1.63E-08
4	GO:0009505: plant-type cell wall	5.37E-08
5	GO:0005576: extracellular region	2.22E-05
6	GO:0009570: chloroplast stroma	1.56E-04
7	GO:0009317: acetyl-CoA carboxylase complex	1.63E-04
8	GO:0005886: plasma membrane	1.65E-04
9	GO:0009534: chloroplast thylakoid	2.98E-04
10	GO:0005828: kinetochore microtubule	3.24E-04
11	GO:0000776: kinetochore	4.13E-04
12	GO:0000777: condensed chromosome kinetochore	6.05E-04
13	GO:0010369: chromocenter	6.05E-04
14	GO:0009533: chloroplast stromal thylakoid	7.07E-04
15	GO:0005763: mitochondrial small ribosomal subunit	1.04E-03
16	GO:0005876: spindle microtubule	1.15E-03
17	GO:0000311: plastid large ribosomal subunit	1.53E-03
18	GO:0009941: chloroplast envelope	1.62E-03
19	GO:0016020: membrane	2.13E-03
20	GO:0009506: plasmodesma	2.87E-03
21	GO:0009504: cell plate	3.94E-03
22	GO:0010319: stromule	4.90E-03
23	GO:0009536: plastid	4.98E-03
24	GO:0005618: cell wall	5.28E-03
25	GO:0031201: SNARE complex	8.47E-03
26	GO:0005635: nuclear envelope	1.16E-02
27	GO:0009507: chloroplast	1.17E-02
28	GO:0009579: thylakoid	1.27E-02
29	GO:0012505: endomembrane system	1.39E-02
30	GO:0010287: plastoglobule	1.60E-02
31	GO:0009543: chloroplast thylakoid lumen	1.66E-02
32	GO:0009524: phragmoplast	1.73E-02
33	GO:0031969: chloroplast membrane	3.32E-02
34	GO:0009535: chloroplast thylakoid membrane	4.79E-02