GO Enrichment Analysis of Co-expressed Genes with
AT5G15230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0042493: response to drug | 0.00E+00 |
| 3 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
| 4 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 5 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 6 | GO:0006412: translation | 8.74E-13 |
| 7 | GO:0042254: ribosome biogenesis | 3.72E-09 |
| 8 | GO:0032544: plastid translation | 2.85E-08 |
| 9 | GO:0015995: chlorophyll biosynthetic process | 2.03E-05 |
| 10 | GO:0009735: response to cytokinin | 4.04E-05 |
| 11 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 6.84E-05 |
| 12 | GO:0010196: nonphotochemical quenching | 1.13E-04 |
| 13 | GO:0006353: DNA-templated transcription, termination | 1.45E-04 |
| 14 | GO:0043489: RNA stabilization | 1.84E-04 |
| 15 | GO:0042759: long-chain fatty acid biosynthetic process | 1.84E-04 |
| 16 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.84E-04 |
| 17 | GO:0060627: regulation of vesicle-mediated transport | 1.84E-04 |
| 18 | GO:0009828: plant-type cell wall loosening | 1.98E-04 |
| 19 | GO:0006949: syncytium formation | 3.10E-04 |
| 20 | GO:0015979: photosynthesis | 3.13E-04 |
| 21 | GO:0001736: establishment of planar polarity | 4.15E-04 |
| 22 | GO:0006013: mannose metabolic process | 6.76E-04 |
| 23 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 6.76E-04 |
| 24 | GO:0090391: granum assembly | 6.76E-04 |
| 25 | GO:0009664: plant-type cell wall organization | 8.96E-04 |
| 26 | GO:0009826: unidimensional cell growth | 9.20E-04 |
| 27 | GO:0010088: phloem development | 9.65E-04 |
| 28 | GO:0009650: UV protection | 9.65E-04 |
| 29 | GO:1901332: negative regulation of lateral root development | 9.65E-04 |
| 30 | GO:0006986: response to unfolded protein | 9.65E-04 |
| 31 | GO:0051085: chaperone mediated protein folding requiring cofactor | 9.65E-04 |
| 32 | GO:0010239: chloroplast mRNA processing | 9.65E-04 |
| 33 | GO:0042335: cuticle development | 1.31E-03 |
| 34 | GO:0000413: protein peptidyl-prolyl isomerization | 1.31E-03 |
| 35 | GO:0010236: plastoquinone biosynthetic process | 1.63E-03 |
| 36 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.63E-03 |
| 37 | GO:0032973: amino acid export | 2.01E-03 |
| 38 | GO:0006014: D-ribose metabolic process | 2.01E-03 |
| 39 | GO:0042549: photosystem II stabilization | 2.01E-03 |
| 40 | GO:1901259: chloroplast rRNA processing | 2.41E-03 |
| 41 | GO:0042372: phylloquinone biosynthetic process | 2.41E-03 |
| 42 | GO:0006694: steroid biosynthetic process | 2.41E-03 |
| 43 | GO:0010019: chloroplast-nucleus signaling pathway | 2.41E-03 |
| 44 | GO:0010027: thylakoid membrane organization | 2.50E-03 |
| 45 | GO:0009772: photosynthetic electron transport in photosystem II | 2.83E-03 |
| 46 | GO:0043090: amino acid import | 2.83E-03 |
| 47 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.83E-03 |
| 48 | GO:0045490: pectin catabolic process | 3.03E-03 |
| 49 | GO:0042255: ribosome assembly | 3.28E-03 |
| 50 | GO:0000028: ribosomal small subunit assembly | 3.28E-03 |
| 51 | GO:0010311: lateral root formation | 3.42E-03 |
| 52 | GO:0009808: lignin metabolic process | 3.75E-03 |
| 53 | GO:0009631: cold acclimation | 3.76E-03 |
| 54 | GO:0080144: amino acid homeostasis | 4.25E-03 |
| 55 | GO:0034599: cellular response to oxidative stress | 4.30E-03 |
| 56 | GO:0030001: metal ion transport | 4.69E-03 |
| 57 | GO:0009658: chloroplast organization | 5.27E-03 |
| 58 | GO:0006535: cysteine biosynthetic process from serine | 5.30E-03 |
| 59 | GO:0048829: root cap development | 5.30E-03 |
| 60 | GO:0043085: positive regulation of catalytic activity | 5.85E-03 |
| 61 | GO:0048765: root hair cell differentiation | 5.85E-03 |
| 62 | GO:0010015: root morphogenesis | 5.85E-03 |
| 63 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.43E-03 |
| 64 | GO:0010102: lateral root morphogenesis | 7.03E-03 |
| 65 | GO:0006006: glucose metabolic process | 7.03E-03 |
| 66 | GO:2000012: regulation of auxin polar transport | 7.03E-03 |
| 67 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.23E-03 |
| 68 | GO:0019253: reductive pentose-phosphate cycle | 7.64E-03 |
| 69 | GO:0010207: photosystem II assembly | 7.64E-03 |
| 70 | GO:0010143: cutin biosynthetic process | 7.64E-03 |
| 71 | GO:0006457: protein folding | 8.59E-03 |
| 72 | GO:0010025: wax biosynthetic process | 8.93E-03 |
| 73 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.93E-03 |
| 74 | GO:0051017: actin filament bundle assembly | 9.60E-03 |
| 75 | GO:0019344: cysteine biosynthetic process | 9.60E-03 |
| 76 | GO:0000027: ribosomal large subunit assembly | 9.60E-03 |
| 77 | GO:0006869: lipid transport | 9.79E-03 |
| 78 | GO:0016042: lipid catabolic process | 1.10E-02 |
| 79 | GO:0003333: amino acid transmembrane transport | 1.10E-02 |
| 80 | GO:0009411: response to UV | 1.25E-02 |
| 81 | GO:0019722: calcium-mediated signaling | 1.32E-02 |
| 82 | GO:0080022: primary root development | 1.48E-02 |
| 83 | GO:0008033: tRNA processing | 1.48E-02 |
| 84 | GO:0009790: embryo development | 1.49E-02 |
| 85 | GO:0009958: positive gravitropism | 1.56E-02 |
| 86 | GO:0006662: glycerol ether metabolic process | 1.56E-02 |
| 87 | GO:0019252: starch biosynthetic process | 1.73E-02 |
| 88 | GO:0000302: response to reactive oxygen species | 1.81E-02 |
| 89 | GO:0016132: brassinosteroid biosynthetic process | 1.81E-02 |
| 90 | GO:0009451: RNA modification | 1.81E-02 |
| 91 | GO:0032502: developmental process | 1.90E-02 |
| 92 | GO:0009567: double fertilization forming a zygote and endosperm | 2.07E-02 |
| 93 | GO:0007267: cell-cell signaling | 2.17E-02 |
| 94 | GO:0071805: potassium ion transmembrane transport | 2.17E-02 |
| 95 | GO:0009627: systemic acquired resistance | 2.55E-02 |
| 96 | GO:0009817: defense response to fungus, incompatible interaction | 2.84E-02 |
| 97 | GO:0006811: ion transport | 3.05E-02 |
| 98 | GO:0009834: plant-type secondary cell wall biogenesis | 3.05E-02 |
| 99 | GO:0007568: aging | 3.15E-02 |
| 100 | GO:0006865: amino acid transport | 3.26E-02 |
| 101 | GO:0045087: innate immune response | 3.36E-02 |
| 102 | GO:0016051: carbohydrate biosynthetic process | 3.36E-02 |
| 103 | GO:0080167: response to karrikin | 3.39E-02 |
| 104 | GO:0010114: response to red light | 4.03E-02 |
| 105 | GO:0009926: auxin polar transport | 4.03E-02 |
| 106 | GO:0006855: drug transmembrane transport | 4.50E-02 |
| 107 | GO:0042538: hyperosmotic salinity response | 4.73E-02 |
| 108 | GO:0006629: lipid metabolic process | 4.97E-02 |
| 109 | GO:0006486: protein glycosylation | 4.98E-02 |
| 110 | GO:0006813: potassium ion transport | 4.98E-02 |
| 111 | GO:0009809: lignin biosynthetic process | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0005048: signal sequence binding | 0.00E+00 |
| 4 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 5 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 6 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 7 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 8 | GO:0019843: rRNA binding | 3.83E-17 |
| 9 | GO:0003735: structural constituent of ribosome | 2.18E-14 |
| 10 | GO:0016851: magnesium chelatase activity | 4.05E-08 |
| 11 | GO:0030570: pectate lyase activity | 6.84E-05 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.70E-05 |
| 13 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.84E-04 |
| 14 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.15E-04 |
| 15 | GO:0042389: omega-3 fatty acid desaturase activity | 4.15E-04 |
| 16 | GO:0008266: poly(U) RNA binding | 5.30E-04 |
| 17 | GO:0030267: glyoxylate reductase (NADP) activity | 6.76E-04 |
| 18 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.76E-04 |
| 19 | GO:0043023: ribosomal large subunit binding | 9.65E-04 |
| 20 | GO:0008097: 5S rRNA binding | 9.65E-04 |
| 21 | GO:0001872: (1->3)-beta-D-glucan binding | 9.65E-04 |
| 22 | GO:0004659: prenyltransferase activity | 1.28E-03 |
| 23 | GO:0010011: auxin binding | 1.28E-03 |
| 24 | GO:0010328: auxin influx transmembrane transporter activity | 1.28E-03 |
| 25 | GO:0004040: amidase activity | 1.63E-03 |
| 26 | GO:0051015: actin filament binding | 1.98E-03 |
| 27 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.01E-03 |
| 28 | GO:0016688: L-ascorbate peroxidase activity | 2.01E-03 |
| 29 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.01E-03 |
| 30 | GO:0004130: cytochrome-c peroxidase activity | 2.01E-03 |
| 31 | GO:0016829: lyase activity | 2.22E-03 |
| 32 | GO:0004747: ribokinase activity | 2.41E-03 |
| 33 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.41E-03 |
| 34 | GO:0004559: alpha-mannosidase activity | 2.41E-03 |
| 35 | GO:0004124: cysteine synthase activity | 2.41E-03 |
| 36 | GO:0008865: fructokinase activity | 3.28E-03 |
| 37 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.28E-03 |
| 38 | GO:0008312: 7S RNA binding | 3.28E-03 |
| 39 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.75E-03 |
| 40 | GO:0008047: enzyme activator activity | 5.30E-03 |
| 41 | GO:0016788: hydrolase activity, acting on ester bonds | 5.39E-03 |
| 42 | GO:0043621: protein self-association | 5.73E-03 |
| 43 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 6.43E-03 |
| 44 | GO:0008378: galactosyltransferase activity | 6.43E-03 |
| 45 | GO:0008081: phosphoric diester hydrolase activity | 7.03E-03 |
| 46 | GO:0052689: carboxylic ester hydrolase activity | 7.86E-03 |
| 47 | GO:0015171: amino acid transmembrane transporter activity | 7.91E-03 |
| 48 | GO:0005528: FK506 binding | 9.60E-03 |
| 49 | GO:0015079: potassium ion transmembrane transporter activity | 1.03E-02 |
| 50 | GO:0051087: chaperone binding | 1.03E-02 |
| 51 | GO:0003727: single-stranded RNA binding | 1.32E-02 |
| 52 | GO:0047134: protein-disulfide reductase activity | 1.40E-02 |
| 53 | GO:0008080: N-acetyltransferase activity | 1.56E-02 |
| 54 | GO:0004791: thioredoxin-disulfide reductase activity | 1.64E-02 |
| 55 | GO:0008289: lipid binding | 1.73E-02 |
| 56 | GO:0004518: nuclease activity | 1.90E-02 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.99E-02 |
| 58 | GO:0016791: phosphatase activity | 2.07E-02 |
| 59 | GO:0030247: polysaccharide binding | 2.64E-02 |
| 60 | GO:0008236: serine-type peptidase activity | 2.74E-02 |
| 61 | GO:0003729: mRNA binding | 3.04E-02 |
| 62 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.15E-02 |
| 63 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.32E-02 |
| 64 | GO:0050661: NADP binding | 3.69E-02 |
| 65 | GO:0015293: symporter activity | 4.38E-02 |
| 66 | GO:0051287: NAD binding | 4.61E-02 |
| 67 | GO:0003924: GTPase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009547: plastid ribosome | 0.00E+00 |
| 3 | GO:0009570: chloroplast stroma | 1.24E-33 |
| 4 | GO:0009507: chloroplast | 1.16E-20 |
| 5 | GO:0009941: chloroplast envelope | 1.82E-17 |
| 6 | GO:0009579: thylakoid | 1.07E-13 |
| 7 | GO:0005840: ribosome | 4.09E-13 |
| 8 | GO:0009534: chloroplast thylakoid | 3.75E-11 |
| 9 | GO:0010007: magnesium chelatase complex | 8.31E-09 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 8.54E-08 |
| 11 | GO:0031977: thylakoid lumen | 9.33E-08 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 1.01E-07 |
| 13 | GO:0005618: cell wall | 1.35E-05 |
| 14 | GO:0000311: plastid large ribosomal subunit | 1.44E-05 |
| 15 | GO:0009505: plant-type cell wall | 2.34E-05 |
| 16 | GO:0048046: apoplast | 4.61E-05 |
| 17 | GO:0009515: granal stacked thylakoid | 1.84E-04 |
| 18 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.84E-04 |
| 19 | GO:0080085: signal recognition particle, chloroplast targeting | 4.15E-04 |
| 20 | GO:0000312: plastid small ribosomal subunit | 5.30E-04 |
| 21 | GO:0009509: chromoplast | 6.76E-04 |
| 22 | GO:0016020: membrane | 1.27E-03 |
| 23 | GO:0000793: condensed chromosome | 2.01E-03 |
| 24 | GO:0009986: cell surface | 2.83E-03 |
| 25 | GO:0000794: condensed nuclear chromosome | 2.83E-03 |
| 26 | GO:0009506: plasmodesma | 3.00E-03 |
| 27 | GO:0005576: extracellular region | 3.59E-03 |
| 28 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.75E-03 |
| 29 | GO:0046658: anchored component of plasma membrane | 4.32E-03 |
| 30 | GO:0005884: actin filament | 5.85E-03 |
| 31 | GO:0090404: pollen tube tip | 5.85E-03 |
| 32 | GO:0005856: cytoskeleton | 5.95E-03 |
| 33 | GO:0005578: proteinaceous extracellular matrix | 7.03E-03 |
| 34 | GO:0005886: plasma membrane | 7.51E-03 |
| 35 | GO:0030095: chloroplast photosystem II | 7.64E-03 |
| 36 | GO:0042651: thylakoid membrane | 1.03E-02 |
| 37 | GO:0009654: photosystem II oxygen evolving complex | 1.03E-02 |
| 38 | GO:0031225: anchored component of membrane | 1.14E-02 |
| 39 | GO:0015629: actin cytoskeleton | 1.25E-02 |
| 40 | GO:0009523: photosystem II | 1.73E-02 |
| 41 | GO:0019898: extrinsic component of membrane | 1.73E-02 |
| 42 | GO:0009295: nucleoid | 2.17E-02 |
| 43 | GO:0009536: plastid | 2.29E-02 |
| 44 | GO:0022627: cytosolic small ribosomal subunit | 2.34E-02 |
| 45 | GO:0030529: intracellular ribonucleoprotein complex | 2.35E-02 |
| 46 | GO:0015934: large ribosomal subunit | 3.15E-02 |
| 47 | GO:0022625: cytosolic large ribosomal subunit | 3.56E-02 |
| 48 | GO:0005819: spindle | 3.58E-02 |
| 49 | GO:0005768: endosome | 4.92E-02 |