GO Enrichment Analysis of Co-expressed Genes with
AT5G14740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 5 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 6 | GO:0032544: plastid translation | 4.28E-08 |
| 7 | GO:0006412: translation | 1.37E-07 |
| 8 | GO:0042254: ribosome biogenesis | 2.92E-05 |
| 9 | GO:0015976: carbon utilization | 3.17E-05 |
| 10 | GO:2000122: negative regulation of stomatal complex development | 3.17E-05 |
| 11 | GO:0010037: response to carbon dioxide | 3.17E-05 |
| 12 | GO:0042549: photosystem II stabilization | 7.50E-05 |
| 13 | GO:0042335: cuticle development | 1.28E-04 |
| 14 | GO:0000413: protein peptidyl-prolyl isomerization | 1.28E-04 |
| 15 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.09E-04 |
| 16 | GO:0060627: regulation of vesicle-mediated transport | 2.09E-04 |
| 17 | GO:0071277: cellular response to calcium ion | 2.09E-04 |
| 18 | GO:0043489: RNA stabilization | 2.09E-04 |
| 19 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.09E-04 |
| 20 | GO:0010442: guard cell morphogenesis | 2.09E-04 |
| 21 | GO:0071370: cellular response to gibberellin stimulus | 2.09E-04 |
| 22 | GO:0042547: cell wall modification involved in multidimensional cell growth | 2.09E-04 |
| 23 | GO:1904964: positive regulation of phytol biosynthetic process | 2.09E-04 |
| 24 | GO:0042371: vitamin K biosynthetic process | 2.09E-04 |
| 25 | GO:0007267: cell-cell signaling | 2.74E-04 |
| 26 | GO:0009735: response to cytokinin | 3.73E-04 |
| 27 | GO:0009773: photosynthetic electron transport in photosystem I | 4.29E-04 |
| 28 | GO:0015979: photosynthesis | 4.36E-04 |
| 29 | GO:2000123: positive regulation of stomatal complex development | 4.66E-04 |
| 30 | GO:0052541: plant-type cell wall cellulose metabolic process | 4.66E-04 |
| 31 | GO:0006695: cholesterol biosynthetic process | 4.66E-04 |
| 32 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.66E-04 |
| 33 | GO:0010207: photosystem II assembly | 6.29E-04 |
| 34 | GO:0045490: pectin catabolic process | 6.60E-04 |
| 35 | GO:0006833: water transport | 7.82E-04 |
| 36 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.08E-03 |
| 37 | GO:0006810: transport | 1.16E-03 |
| 38 | GO:0019722: calcium-mediated signaling | 1.34E-03 |
| 39 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.44E-03 |
| 40 | GO:0009765: photosynthesis, light harvesting | 1.44E-03 |
| 41 | GO:0006085: acetyl-CoA biosynthetic process | 1.44E-03 |
| 42 | GO:0031122: cytoplasmic microtubule organization | 1.44E-03 |
| 43 | GO:2000038: regulation of stomatal complex development | 1.44E-03 |
| 44 | GO:0006546: glycine catabolic process | 1.44E-03 |
| 45 | GO:0042991: transcription factor import into nucleus | 1.44E-03 |
| 46 | GO:0034220: ion transmembrane transport | 1.56E-03 |
| 47 | GO:0042742: defense response to bacterium | 1.82E-03 |
| 48 | GO:0016123: xanthophyll biosynthetic process | 1.83E-03 |
| 49 | GO:0010375: stomatal complex patterning | 1.83E-03 |
| 50 | GO:0016120: carotene biosynthetic process | 1.83E-03 |
| 51 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.85E-03 |
| 52 | GO:0010190: cytochrome b6f complex assembly | 2.26E-03 |
| 53 | GO:0045454: cell redox homeostasis | 2.32E-03 |
| 54 | GO:0009955: adaxial/abaxial pattern specification | 2.71E-03 |
| 55 | GO:1901259: chloroplast rRNA processing | 2.71E-03 |
| 56 | GO:0042372: phylloquinone biosynthetic process | 2.71E-03 |
| 57 | GO:0009612: response to mechanical stimulus | 2.71E-03 |
| 58 | GO:0006694: steroid biosynthetic process | 2.71E-03 |
| 59 | GO:0010555: response to mannitol | 2.71E-03 |
| 60 | GO:0009610: response to symbiotic fungus | 3.20E-03 |
| 61 | GO:0030497: fatty acid elongation | 3.20E-03 |
| 62 | GO:0009645: response to low light intensity stimulus | 3.20E-03 |
| 63 | GO:0009409: response to cold | 3.31E-03 |
| 64 | GO:0006633: fatty acid biosynthetic process | 3.37E-03 |
| 65 | GO:0010411: xyloglucan metabolic process | 3.50E-03 |
| 66 | GO:0009642: response to light intensity | 3.71E-03 |
| 67 | GO:0030091: protein repair | 3.71E-03 |
| 68 | GO:0009704: de-etiolation | 3.71E-03 |
| 69 | GO:0009817: defense response to fungus, incompatible interaction | 3.88E-03 |
| 70 | GO:0018298: protein-chromophore linkage | 3.88E-03 |
| 71 | GO:0009932: cell tip growth | 4.24E-03 |
| 72 | GO:0009808: lignin metabolic process | 4.24E-03 |
| 73 | GO:0010119: regulation of stomatal movement | 4.48E-03 |
| 74 | GO:0045337: farnesyl diphosphate biosynthetic process | 4.80E-03 |
| 75 | GO:0090333: regulation of stomatal closure | 4.80E-03 |
| 76 | GO:0033384: geranyl diphosphate biosynthetic process | 4.80E-03 |
| 77 | GO:0006839: mitochondrial transport | 5.60E-03 |
| 78 | GO:0006949: syncytium formation | 5.99E-03 |
| 79 | GO:0019538: protein metabolic process | 5.99E-03 |
| 80 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 5.99E-03 |
| 81 | GO:0043069: negative regulation of programmed cell death | 5.99E-03 |
| 82 | GO:0009826: unidimensional cell growth | 6.30E-03 |
| 83 | GO:0042546: cell wall biogenesis | 6.59E-03 |
| 84 | GO:0009658: chloroplast organization | 6.61E-03 |
| 85 | GO:0000038: very long-chain fatty acid metabolic process | 6.62E-03 |
| 86 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.62E-03 |
| 87 | GO:0009725: response to hormone | 7.96E-03 |
| 88 | GO:0006006: glucose metabolic process | 7.96E-03 |
| 89 | GO:0009736: cytokinin-activated signaling pathway | 8.54E-03 |
| 90 | GO:0010143: cutin biosynthetic process | 8.66E-03 |
| 91 | GO:0019253: reductive pentose-phosphate cycle | 8.66E-03 |
| 92 | GO:0005985: sucrose metabolic process | 9.37E-03 |
| 93 | GO:0019762: glucosinolate catabolic process | 1.01E-02 |
| 94 | GO:0010025: wax biosynthetic process | 1.01E-02 |
| 95 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.01E-02 |
| 96 | GO:0006071: glycerol metabolic process | 1.01E-02 |
| 97 | GO:0019344: cysteine biosynthetic process | 1.09E-02 |
| 98 | GO:0000027: ribosomal large subunit assembly | 1.09E-02 |
| 99 | GO:0055085: transmembrane transport | 1.09E-02 |
| 100 | GO:0006418: tRNA aminoacylation for protein translation | 1.17E-02 |
| 101 | GO:0010026: trichome differentiation | 1.17E-02 |
| 102 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.17E-02 |
| 103 | GO:0042545: cell wall modification | 1.18E-02 |
| 104 | GO:0006869: lipid transport | 1.23E-02 |
| 105 | GO:0061077: chaperone-mediated protein folding | 1.25E-02 |
| 106 | GO:0009814: defense response, incompatible interaction | 1.33E-02 |
| 107 | GO:0080092: regulation of pollen tube growth | 1.33E-02 |
| 108 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.41E-02 |
| 109 | GO:0016117: carotenoid biosynthetic process | 1.59E-02 |
| 110 | GO:0000271: polysaccharide biosynthetic process | 1.68E-02 |
| 111 | GO:0080022: primary root development | 1.68E-02 |
| 112 | GO:0045489: pectin biosynthetic process | 1.77E-02 |
| 113 | GO:0048825: cotyledon development | 1.96E-02 |
| 114 | GO:0002229: defense response to oomycetes | 2.06E-02 |
| 115 | GO:0016132: brassinosteroid biosynthetic process | 2.06E-02 |
| 116 | GO:0010583: response to cyclopentenone | 2.15E-02 |
| 117 | GO:1901657: glycosyl compound metabolic process | 2.25E-02 |
| 118 | GO:0009828: plant-type cell wall loosening | 2.36E-02 |
| 119 | GO:0009627: systemic acquired resistance | 2.89E-02 |
| 120 | GO:0042128: nitrate assimilation | 2.89E-02 |
| 121 | GO:0009416: response to light stimulus | 2.94E-02 |
| 122 | GO:0016311: dephosphorylation | 3.11E-02 |
| 123 | GO:0048481: plant ovule development | 3.23E-02 |
| 124 | GO:0000160: phosphorelay signal transduction system | 3.34E-02 |
| 125 | GO:0009834: plant-type secondary cell wall biogenesis | 3.46E-02 |
| 126 | GO:0009407: toxin catabolic process | 3.46E-02 |
| 127 | GO:0010218: response to far red light | 3.46E-02 |
| 128 | GO:0009631: cold acclimation | 3.58E-02 |
| 129 | GO:0045087: innate immune response | 3.82E-02 |
| 130 | GO:0016051: carbohydrate biosynthetic process | 3.82E-02 |
| 131 | GO:0009637: response to blue light | 3.82E-02 |
| 132 | GO:0006457: protein folding | 4.04E-02 |
| 133 | GO:0005975: carbohydrate metabolic process | 4.05E-02 |
| 134 | GO:0006631: fatty acid metabolic process | 4.32E-02 |
| 135 | GO:0010114: response to red light | 4.57E-02 |
| 136 | GO:0008643: carbohydrate transport | 4.84E-02 |
| 137 | GO:0009636: response to toxic substance | 4.97E-02 |
| 138 | GO:0055114: oxidation-reduction process | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 7 | GO:0019843: rRNA binding | 2.13E-13 |
| 8 | GO:0003735: structural constituent of ribosome | 1.69E-08 |
| 9 | GO:0051920: peroxiredoxin activity | 1.29E-06 |
| 10 | GO:0016209: antioxidant activity | 3.20E-06 |
| 11 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.20E-04 |
| 12 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.09E-04 |
| 13 | GO:0008568: microtubule-severing ATPase activity | 2.09E-04 |
| 14 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 4.66E-04 |
| 15 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.66E-04 |
| 16 | GO:0042389: omega-3 fatty acid desaturase activity | 4.66E-04 |
| 17 | GO:0004089: carbonate dehydratase activity | 5.58E-04 |
| 18 | GO:0008266: poly(U) RNA binding | 6.29E-04 |
| 19 | GO:0050734: hydroxycinnamoyltransferase activity | 7.59E-04 |
| 20 | GO:0002161: aminoacyl-tRNA editing activity | 7.59E-04 |
| 21 | GO:0004148: dihydrolipoyl dehydrogenase activity | 7.59E-04 |
| 22 | GO:0030267: glyoxylate reductase (NADP) activity | 7.59E-04 |
| 23 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 7.59E-04 |
| 24 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 7.84E-04 |
| 25 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.27E-04 |
| 26 | GO:0003878: ATP citrate synthase activity | 1.08E-03 |
| 27 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.08E-03 |
| 28 | GO:0043023: ribosomal large subunit binding | 1.08E-03 |
| 29 | GO:0030570: pectate lyase activity | 1.23E-03 |
| 30 | GO:0043495: protein anchor | 1.44E-03 |
| 31 | GO:0004659: prenyltransferase activity | 1.44E-03 |
| 32 | GO:0030599: pectinesterase activity | 1.76E-03 |
| 33 | GO:0009922: fatty acid elongase activity | 1.83E-03 |
| 34 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.07E-03 |
| 35 | GO:0016208: AMP binding | 2.26E-03 |
| 36 | GO:0008200: ion channel inhibitor activity | 2.26E-03 |
| 37 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.66E-03 |
| 38 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.71E-03 |
| 39 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.71E-03 |
| 40 | GO:0015250: water channel activity | 2.98E-03 |
| 41 | GO:0016168: chlorophyll binding | 3.15E-03 |
| 42 | GO:0019899: enzyme binding | 3.20E-03 |
| 43 | GO:0102483: scopolin beta-glucosidase activity | 3.50E-03 |
| 44 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.50E-03 |
| 45 | GO:0004564: beta-fructofuranosidase activity | 3.71E-03 |
| 46 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.24E-03 |
| 47 | GO:0004337: geranyltranstransferase activity | 4.80E-03 |
| 48 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 4.80E-03 |
| 49 | GO:0003993: acid phosphatase activity | 5.13E-03 |
| 50 | GO:0042802: identical protein binding | 5.14E-03 |
| 51 | GO:0008422: beta-glucosidase activity | 5.36E-03 |
| 52 | GO:0004575: sucrose alpha-glucosidase activity | 5.38E-03 |
| 53 | GO:0004601: peroxidase activity | 6.61E-03 |
| 54 | GO:0004161: dimethylallyltranstransferase activity | 6.62E-03 |
| 55 | GO:0008794: arsenate reductase (glutaredoxin) activity | 6.62E-03 |
| 56 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 6.62E-03 |
| 57 | GO:0000049: tRNA binding | 7.28E-03 |
| 58 | GO:0031072: heat shock protein binding | 7.96E-03 |
| 59 | GO:0045330: aspartyl esterase activity | 9.46E-03 |
| 60 | GO:0052689: carboxylic ester hydrolase activity | 9.88E-03 |
| 61 | GO:0031409: pigment binding | 1.01E-02 |
| 62 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.01E-02 |
| 63 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.01E-02 |
| 64 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.01E-02 |
| 65 | GO:0004857: enzyme inhibitor activity | 1.09E-02 |
| 66 | GO:0005528: FK506 binding | 1.09E-02 |
| 67 | GO:0004650: polygalacturonase activity | 1.11E-02 |
| 68 | GO:0004871: signal transducer activity | 1.16E-02 |
| 69 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.33E-02 |
| 70 | GO:0022891: substrate-specific transmembrane transporter activity | 1.41E-02 |
| 71 | GO:0008514: organic anion transmembrane transporter activity | 1.50E-02 |
| 72 | GO:0004812: aminoacyl-tRNA ligase activity | 1.59E-02 |
| 73 | GO:0016829: lyase activity | 1.65E-02 |
| 74 | GO:0019901: protein kinase binding | 1.96E-02 |
| 75 | GO:0008289: lipid binding | 2.17E-02 |
| 76 | GO:0000156: phosphorelay response regulator activity | 2.25E-02 |
| 77 | GO:0003824: catalytic activity | 2.53E-02 |
| 78 | GO:0016788: hydrolase activity, acting on ester bonds | 3.33E-02 |
| 79 | GO:0030145: manganese ion binding | 3.58E-02 |
| 80 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.58E-02 |
| 81 | GO:0004672: protein kinase activity | 3.87E-02 |
| 82 | GO:0050661: NADP binding | 4.19E-02 |
| 83 | GO:0004364: glutathione transferase activity | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.65E-20 |
| 3 | GO:0009941: chloroplast envelope | 7.87E-20 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.32E-16 |
| 5 | GO:0009579: thylakoid | 1.06E-15 |
| 6 | GO:0009570: chloroplast stroma | 6.07E-15 |
| 7 | GO:0048046: apoplast | 1.72E-10 |
| 8 | GO:0005840: ribosome | 3.49E-09 |
| 9 | GO:0031977: thylakoid lumen | 4.78E-09 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 6.66E-09 |
| 11 | GO:0009505: plant-type cell wall | 1.01E-08 |
| 12 | GO:0009534: chloroplast thylakoid | 2.20E-08 |
| 13 | GO:0016020: membrane | 1.65E-05 |
| 14 | GO:0046658: anchored component of plasma membrane | 1.82E-05 |
| 15 | GO:0005576: extracellular region | 3.83E-05 |
| 16 | GO:0031225: anchored component of membrane | 5.19E-05 |
| 17 | GO:0005618: cell wall | 1.27E-04 |
| 18 | GO:0009547: plastid ribosome | 2.09E-04 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.65E-04 |
| 20 | GO:0022626: cytosolic ribosome | 4.09E-04 |
| 21 | GO:0042170: plastid membrane | 4.66E-04 |
| 22 | GO:0000311: plastid large ribosomal subunit | 4.92E-04 |
| 23 | GO:0030095: chloroplast photosystem II | 6.29E-04 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 9.49E-04 |
| 25 | GO:0005775: vacuolar lumen | 1.08E-03 |
| 26 | GO:0009346: citrate lyase complex | 1.08E-03 |
| 27 | GO:0005960: glycine cleavage complex | 1.08E-03 |
| 28 | GO:0009523: photosystem II | 1.94E-03 |
| 29 | GO:0019898: extrinsic component of membrane | 1.94E-03 |
| 30 | GO:0010319: stromule | 2.66E-03 |
| 31 | GO:0009533: chloroplast stromal thylakoid | 3.20E-03 |
| 32 | GO:0015934: large ribosomal subunit | 4.48E-03 |
| 33 | GO:0005763: mitochondrial small ribosomal subunit | 4.80E-03 |
| 34 | GO:0009506: plasmodesma | 5.09E-03 |
| 35 | GO:0016324: apical plasma membrane | 5.99E-03 |
| 36 | GO:0031012: extracellular matrix | 7.96E-03 |
| 37 | GO:0000312: plastid small ribosomal subunit | 8.66E-03 |
| 38 | GO:0031969: chloroplast membrane | 8.69E-03 |
| 39 | GO:0030076: light-harvesting complex | 9.37E-03 |
| 40 | GO:0005875: microtubule associated complex | 1.01E-02 |
| 41 | GO:0042651: thylakoid membrane | 1.17E-02 |
| 42 | GO:0009706: chloroplast inner membrane | 1.22E-02 |
| 43 | GO:0010287: plastoglobule | 1.45E-02 |
| 44 | GO:0009522: photosystem I | 1.86E-02 |
| 45 | GO:0005778: peroxisomal membrane | 2.46E-02 |
| 46 | GO:0030529: intracellular ribonucleoprotein complex | 2.67E-02 |
| 47 | GO:0009536: plastid | 2.98E-02 |
| 48 | GO:0005886: plasma membrane | 3.02E-02 |
| 49 | GO:0000325: plant-type vacuole | 3.58E-02 |
| 50 | GO:0022625: cytosolic large ribosomal subunit | 4.25E-02 |
| 51 | GO:0031902: late endosome membrane | 4.32E-02 |