GO Enrichment Analysis of Co-expressed Genes with
AT5G14320
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0006642: triglyceride mobilization | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0070455: positive regulation of heme biosynthetic process | 0.00E+00 |
| 5 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 6 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 7 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 8 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 9 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 10 | GO:0006412: translation | 5.68E-14 |
| 11 | GO:0015979: photosynthesis | 2.57E-12 |
| 12 | GO:0009735: response to cytokinin | 1.81E-11 |
| 13 | GO:0009658: chloroplast organization | 1.39E-10 |
| 14 | GO:0010196: nonphotochemical quenching | 3.56E-08 |
| 15 | GO:0042254: ribosome biogenesis | 5.07E-08 |
| 16 | GO:0032544: plastid translation | 1.09E-07 |
| 17 | GO:0009773: photosynthetic electron transport in photosystem I | 5.66E-07 |
| 18 | GO:0010027: thylakoid membrane organization | 2.13E-06 |
| 19 | GO:0015995: chlorophyll biosynthetic process | 3.29E-06 |
| 20 | GO:0090391: granum assembly | 1.27E-05 |
| 21 | GO:0010207: photosystem II assembly | 5.55E-05 |
| 22 | GO:0019253: reductive pentose-phosphate cycle | 5.55E-05 |
| 23 | GO:0031365: N-terminal protein amino acid modification | 8.14E-05 |
| 24 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.77E-04 |
| 25 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 2.77E-04 |
| 26 | GO:0043489: RNA stabilization | 2.77E-04 |
| 27 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.77E-04 |
| 28 | GO:1904964: positive regulation of phytol biosynthetic process | 2.77E-04 |
| 29 | GO:0042371: vitamin K biosynthetic process | 2.77E-04 |
| 30 | GO:0043686: co-translational protein modification | 2.77E-04 |
| 31 | GO:0071588: hydrogen peroxide mediated signaling pathway | 2.77E-04 |
| 32 | GO:0071482: cellular response to light stimulus | 3.32E-04 |
| 33 | GO:0006783: heme biosynthetic process | 3.99E-04 |
| 34 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.09E-04 |
| 35 | GO:0006729: tetrahydrobiopterin biosynthetic process | 6.09E-04 |
| 36 | GO:0006568: tryptophan metabolic process | 6.09E-04 |
| 37 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.09E-04 |
| 38 | GO:0010024: phytochromobilin biosynthetic process | 6.09E-04 |
| 39 | GO:0009073: aromatic amino acid family biosynthetic process | 6.38E-04 |
| 40 | GO:0043085: positive regulation of catalytic activity | 6.38E-04 |
| 41 | GO:0006352: DNA-templated transcription, initiation | 6.38E-04 |
| 42 | GO:0006094: gluconeogenesis | 8.26E-04 |
| 43 | GO:0009767: photosynthetic electron transport chain | 8.26E-04 |
| 44 | GO:0010020: chloroplast fission | 9.28E-04 |
| 45 | GO:0045454: cell redox homeostasis | 9.81E-04 |
| 46 | GO:0010581: regulation of starch biosynthetic process | 9.88E-04 |
| 47 | GO:0006788: heme oxidation | 9.88E-04 |
| 48 | GO:0006954: inflammatory response | 9.88E-04 |
| 49 | GO:0019563: glycerol catabolic process | 9.88E-04 |
| 50 | GO:0006518: peptide metabolic process | 9.88E-04 |
| 51 | GO:0071492: cellular response to UV-A | 9.88E-04 |
| 52 | GO:0032504: multicellular organism reproduction | 9.88E-04 |
| 53 | GO:0006000: fructose metabolic process | 9.88E-04 |
| 54 | GO:0033014: tetrapyrrole biosynthetic process | 1.41E-03 |
| 55 | GO:0016556: mRNA modification | 1.41E-03 |
| 56 | GO:0006986: response to unfolded protein | 1.41E-03 |
| 57 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.41E-03 |
| 58 | GO:2001141: regulation of RNA biosynthetic process | 1.41E-03 |
| 59 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.41E-03 |
| 60 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.83E-03 |
| 61 | GO:0071483: cellular response to blue light | 1.89E-03 |
| 62 | GO:0071486: cellular response to high light intensity | 1.89E-03 |
| 63 | GO:0015994: chlorophyll metabolic process | 1.89E-03 |
| 64 | GO:0042335: cuticle development | 2.33E-03 |
| 65 | GO:0000413: protein peptidyl-prolyl isomerization | 2.33E-03 |
| 66 | GO:0006564: L-serine biosynthetic process | 2.41E-03 |
| 67 | GO:0006461: protein complex assembly | 2.41E-03 |
| 68 | GO:0010190: cytochrome b6f complex assembly | 2.98E-03 |
| 69 | GO:0042549: photosystem II stabilization | 2.98E-03 |
| 70 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.98E-03 |
| 71 | GO:0000470: maturation of LSU-rRNA | 2.98E-03 |
| 72 | GO:0016554: cytidine to uridine editing | 2.98E-03 |
| 73 | GO:0042372: phylloquinone biosynthetic process | 3.58E-03 |
| 74 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.58E-03 |
| 75 | GO:0009854: oxidative photosynthetic carbon pathway | 3.58E-03 |
| 76 | GO:0010019: chloroplast-nucleus signaling pathway | 3.58E-03 |
| 77 | GO:0009828: plant-type cell wall loosening | 3.75E-03 |
| 78 | GO:0006400: tRNA modification | 4.23E-03 |
| 79 | GO:0009395: phospholipid catabolic process | 4.23E-03 |
| 80 | GO:0009772: photosynthetic electron transport in photosystem II | 4.23E-03 |
| 81 | GO:0042255: ribosome assembly | 4.90E-03 |
| 82 | GO:0030091: protein repair | 4.90E-03 |
| 83 | GO:0006353: DNA-templated transcription, termination | 4.90E-03 |
| 84 | GO:0048564: photosystem I assembly | 4.90E-03 |
| 85 | GO:0042744: hydrogen peroxide catabolic process | 5.00E-03 |
| 86 | GO:0009790: embryo development | 5.16E-03 |
| 87 | GO:0009657: plastid organization | 5.62E-03 |
| 88 | GO:0019430: removal of superoxide radicals | 5.62E-03 |
| 89 | GO:0006002: fructose 6-phosphate metabolic process | 5.62E-03 |
| 90 | GO:0009817: defense response to fungus, incompatible interaction | 5.83E-03 |
| 91 | GO:0018298: protein-chromophore linkage | 5.83E-03 |
| 92 | GO:0006457: protein folding | 6.09E-03 |
| 93 | GO:0009631: cold acclimation | 6.75E-03 |
| 94 | GO:0008152: metabolic process | 6.91E-03 |
| 95 | GO:1900865: chloroplast RNA modification | 7.15E-03 |
| 96 | GO:0010380: regulation of chlorophyll biosynthetic process | 7.15E-03 |
| 97 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.15E-03 |
| 98 | GO:0009637: response to blue light | 7.40E-03 |
| 99 | GO:0034599: cellular response to oxidative stress | 7.73E-03 |
| 100 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.97E-03 |
| 101 | GO:0006949: syncytium formation | 7.97E-03 |
| 102 | GO:0006839: mitochondrial transport | 8.43E-03 |
| 103 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.82E-03 |
| 104 | GO:0010114: response to red light | 9.55E-03 |
| 105 | GO:0006006: glucose metabolic process | 1.06E-02 |
| 106 | GO:0005986: sucrose biosynthetic process | 1.06E-02 |
| 107 | GO:0009664: plant-type cell wall organization | 1.20E-02 |
| 108 | GO:0005985: sucrose metabolic process | 1.25E-02 |
| 109 | GO:0090351: seedling development | 1.25E-02 |
| 110 | GO:0042742: defense response to bacterium | 1.33E-02 |
| 111 | GO:0000027: ribosomal large subunit assembly | 1.46E-02 |
| 112 | GO:0006096: glycolytic process | 1.53E-02 |
| 113 | GO:0009695: jasmonic acid biosynthetic process | 1.56E-02 |
| 114 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.56E-02 |
| 115 | GO:0031408: oxylipin biosynthetic process | 1.67E-02 |
| 116 | GO:0019722: calcium-mediated signaling | 2.01E-02 |
| 117 | GO:0009793: embryo development ending in seed dormancy | 2.09E-02 |
| 118 | GO:0009409: response to cold | 2.22E-02 |
| 119 | GO:0080022: primary root development | 2.25E-02 |
| 120 | GO:0008033: tRNA processing | 2.25E-02 |
| 121 | GO:0006662: glycerol ether metabolic process | 2.37E-02 |
| 122 | GO:0055114: oxidation-reduction process | 2.46E-02 |
| 123 | GO:0015986: ATP synthesis coupled proton transport | 2.50E-02 |
| 124 | GO:0007018: microtubule-based movement | 2.50E-02 |
| 125 | GO:0009791: post-embryonic development | 2.63E-02 |
| 126 | GO:0000302: response to reactive oxygen species | 2.76E-02 |
| 127 | GO:0032502: developmental process | 2.89E-02 |
| 128 | GO:0006633: fatty acid biosynthetic process | 2.90E-02 |
| 129 | GO:0007267: cell-cell signaling | 3.30E-02 |
| 130 | GO:0016311: dephosphorylation | 4.17E-02 |
| 131 | GO:0009407: toxin catabolic process | 4.64E-02 |
| 132 | GO:0010218: response to far red light | 4.64E-02 |
| 133 | GO:0009826: unidimensional cell growth | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 2 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 7 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 8 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 9 | GO:0019843: rRNA binding | 1.11E-18 |
| 10 | GO:0003735: structural constituent of ribosome | 2.95E-15 |
| 11 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.03E-08 |
| 12 | GO:0005528: FK506 binding | 3.08E-06 |
| 13 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.53E-06 |
| 14 | GO:0043495: protein anchor | 5.13E-05 |
| 15 | GO:0001053: plastid sigma factor activity | 5.13E-05 |
| 16 | GO:0016987: sigma factor activity | 5.13E-05 |
| 17 | GO:0051920: peroxiredoxin activity | 1.62E-04 |
| 18 | GO:0004033: aldo-keto reductase (NADP) activity | 2.69E-04 |
| 19 | GO:0016209: antioxidant activity | 2.69E-04 |
| 20 | GO:0004655: porphobilinogen synthase activity | 2.77E-04 |
| 21 | GO:0009496: plastoquinol--plastocyanin reductase activity | 2.77E-04 |
| 22 | GO:0042586: peptide deformylase activity | 2.77E-04 |
| 23 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.77E-04 |
| 24 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 2.77E-04 |
| 25 | GO:0004321: fatty-acyl-CoA synthase activity | 2.77E-04 |
| 26 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.77E-04 |
| 27 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 2.77E-04 |
| 28 | GO:0004807: triose-phosphate isomerase activity | 2.77E-04 |
| 29 | GO:0008047: enzyme activator activity | 5.52E-04 |
| 30 | GO:0016168: chlorophyll binding | 5.80E-04 |
| 31 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 6.09E-04 |
| 32 | GO:0016630: protochlorophyllide reductase activity | 6.09E-04 |
| 33 | GO:0047746: chlorophyllase activity | 6.09E-04 |
| 34 | GO:0004617: phosphoglycerate dehydrogenase activity | 6.09E-04 |
| 35 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 6.09E-04 |
| 36 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.09E-04 |
| 37 | GO:0008266: poly(U) RNA binding | 9.28E-04 |
| 38 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.88E-04 |
| 39 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 9.88E-04 |
| 40 | GO:0030267: glyoxylate reductase (NADP) activity | 9.88E-04 |
| 41 | GO:0070402: NADPH binding | 9.88E-04 |
| 42 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 9.88E-04 |
| 43 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 9.88E-04 |
| 44 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 9.88E-04 |
| 45 | GO:0051087: chaperone binding | 1.40E-03 |
| 46 | GO:0016851: magnesium chelatase activity | 1.41E-03 |
| 47 | GO:0043023: ribosomal large subunit binding | 1.41E-03 |
| 48 | GO:0008097: 5S rRNA binding | 1.41E-03 |
| 49 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.54E-03 |
| 50 | GO:0022891: substrate-specific transmembrane transporter activity | 1.83E-03 |
| 51 | GO:0004392: heme oxygenase (decyclizing) activity | 1.89E-03 |
| 52 | GO:0016836: hydro-lyase activity | 1.89E-03 |
| 53 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.89E-03 |
| 54 | GO:0004601: peroxidase activity | 2.37E-03 |
| 55 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.41E-03 |
| 56 | GO:0003959: NADPH dehydrogenase activity | 2.41E-03 |
| 57 | GO:0016788: hydrolase activity, acting on ester bonds | 2.44E-03 |
| 58 | GO:0004791: thioredoxin-disulfide reductase activity | 2.70E-03 |
| 59 | GO:0004130: cytochrome-c peroxidase activity | 2.98E-03 |
| 60 | GO:0016208: AMP binding | 2.98E-03 |
| 61 | GO:0016688: L-ascorbate peroxidase activity | 2.98E-03 |
| 62 | GO:0046872: metal ion binding | 3.32E-03 |
| 63 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.52E-03 |
| 64 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.58E-03 |
| 65 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.58E-03 |
| 66 | GO:0003723: RNA binding | 3.74E-03 |
| 67 | GO:0016597: amino acid binding | 4.23E-03 |
| 68 | GO:0019899: enzyme binding | 4.23E-03 |
| 69 | GO:0008235: metalloexopeptidase activity | 4.23E-03 |
| 70 | GO:0052747: sinapyl alcohol dehydrogenase activity | 4.90E-03 |
| 71 | GO:0016207: 4-coumarate-CoA ligase activity | 6.37E-03 |
| 72 | GO:0016491: oxidoreductase activity | 7.07E-03 |
| 73 | GO:0047617: acyl-CoA hydrolase activity | 7.15E-03 |
| 74 | GO:0003993: acid phosphatase activity | 7.73E-03 |
| 75 | GO:0004177: aminopeptidase activity | 8.82E-03 |
| 76 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 9.70E-03 |
| 77 | GO:0031072: heat shock protein binding | 1.06E-02 |
| 78 | GO:0051287: NAD binding | 1.16E-02 |
| 79 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.29E-02 |
| 80 | GO:0031409: pigment binding | 1.35E-02 |
| 81 | GO:0051082: unfolded protein binding | 1.84E-02 |
| 82 | GO:0030570: pectate lyase activity | 1.89E-02 |
| 83 | GO:0003727: single-stranded RNA binding | 2.01E-02 |
| 84 | GO:0047134: protein-disulfide reductase activity | 2.13E-02 |
| 85 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.37E-02 |
| 86 | GO:0008080: N-acetyltransferase activity | 2.37E-02 |
| 87 | GO:0010181: FMN binding | 2.50E-02 |
| 88 | GO:0050662: coenzyme binding | 2.50E-02 |
| 89 | GO:0009055: electron carrier activity | 2.62E-02 |
| 90 | GO:0005509: calcium ion binding | 3.58E-02 |
| 91 | GO:0042802: identical protein binding | 4.04E-02 |
| 92 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 4.17E-02 |
| 93 | GO:0008236: serine-type peptidase activity | 4.17E-02 |
| 94 | GO:0004222: metalloendopeptidase activity | 4.64E-02 |
| 95 | GO:0008168: methyltransferase activity | 4.72E-02 |
| 96 | GO:0016787: hydrolase activity | 4.74E-02 |
| 97 | GO:0000287: magnesium ion binding | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 4.55E-75 |
| 4 | GO:0009570: chloroplast stroma | 3.85E-54 |
| 5 | GO:0009941: chloroplast envelope | 1.25E-38 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 5.81E-29 |
| 7 | GO:0009579: thylakoid | 9.81E-28 |
| 8 | GO:0009534: chloroplast thylakoid | 3.17E-26 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 2.41E-20 |
| 10 | GO:0031977: thylakoid lumen | 2.34E-18 |
| 11 | GO:0005840: ribosome | 1.66E-14 |
| 12 | GO:0042651: thylakoid membrane | 3.87E-06 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 3.87E-06 |
| 14 | GO:0019898: extrinsic component of membrane | 1.92E-05 |
| 15 | GO:0030095: chloroplast photosystem II | 5.55E-05 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 2.13E-04 |
| 17 | GO:0009547: plastid ribosome | 2.77E-04 |
| 18 | GO:0009523: photosystem II | 3.05E-04 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.99E-04 |
| 20 | GO:0010319: stromule | 4.66E-04 |
| 21 | GO:0000311: plastid large ribosomal subunit | 7.29E-04 |
| 22 | GO:0000312: plastid small ribosomal subunit | 9.28E-04 |
| 23 | GO:0010007: magnesium chelatase complex | 9.88E-04 |
| 24 | GO:0016020: membrane | 2.15E-03 |
| 25 | GO:0009512: cytochrome b6f complex | 2.41E-03 |
| 26 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.98E-03 |
| 27 | GO:0009706: chloroplast inner membrane | 3.19E-03 |
| 28 | GO:0022625: cytosolic large ribosomal subunit | 3.56E-03 |
| 29 | GO:0010287: plastoglobule | 3.96E-03 |
| 30 | GO:0009536: plastid | 6.15E-03 |
| 31 | GO:0015934: large ribosomal subunit | 6.75E-03 |
| 32 | GO:0048046: apoplast | 7.83E-03 |
| 33 | GO:0046658: anchored component of plasma membrane | 9.14E-03 |
| 34 | GO:0030076: light-harvesting complex | 1.25E-02 |
| 35 | GO:0043234: protein complex | 1.35E-02 |
| 36 | GO:0005874: microtubule | 1.40E-02 |
| 37 | GO:0031969: chloroplast membrane | 1.47E-02 |
| 38 | GO:0015935: small ribosomal subunit | 1.67E-02 |
| 39 | GO:0009532: plastid stroma | 1.67E-02 |
| 40 | GO:0005777: peroxisome | 1.75E-02 |
| 41 | GO:0005871: kinesin complex | 2.13E-02 |
| 42 | GO:0009522: photosystem I | 2.50E-02 |
| 43 | GO:0005759: mitochondrial matrix | 2.90E-02 |
| 44 | GO:0009295: nucleoid | 3.30E-02 |
| 45 | GO:0005778: peroxisomal membrane | 3.30E-02 |
| 46 | GO:0030529: intracellular ribonucleoprotein complex | 3.58E-02 |
| 47 | GO:0022627: cytosolic small ribosomal subunit | 4.20E-02 |
| 48 | GO:0022626: cytosolic ribosome | 4.61E-02 |