Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G13400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033494: ferulate metabolic process0.00E+00
2GO:0007638: mechanosensory behavior0.00E+00
3GO:0042335: cuticle development1.86E-08
4GO:0015976: carbon utilization4.86E-08
5GO:2000122: negative regulation of stomatal complex development1.40E-05
6GO:0010037: response to carbon dioxide1.40E-05
7GO:0071555: cell wall organization9.31E-05
8GO:0046520: sphingoid biosynthetic process1.30E-04
9GO:0006723: cuticle hydrocarbon biosynthetic process1.30E-04
10GO:0042547: cell wall modification involved in multidimensional cell growth1.30E-04
11GO:0042371: vitamin K biosynthetic process1.30E-04
12GO:0010411: xyloglucan metabolic process1.61E-04
13GO:0006633: fatty acid biosynthetic process1.96E-04
14GO:0000038: very long-chain fatty acid metabolic process2.19E-04
15GO:0006695: cholesterol biosynthetic process2.99E-04
16GO:0042546: cell wall biogenesis3.81E-04
17GO:0010025: wax biosynthetic process4.10E-04
18GO:0006833: water transport4.10E-04
19GO:0043447: alkane biosynthetic process4.92E-04
20GO:0009416: response to light stimulus5.78E-04
21GO:0007231: osmosensory signaling pathway7.04E-04
22GO:0034220: ion transmembrane transport8.26E-04
23GO:0033500: carbohydrate homeostasis9.34E-04
24GO:0031122: cytoplasmic microtubule organization9.34E-04
25GO:0006869: lipid transport9.66E-04
26GO:0010583: response to cyclopentenone1.15E-03
27GO:0016554: cytidine to uridine editing1.45E-03
28GO:0010190: cytochrome b6f complex assembly1.45E-03
29GO:0006596: polyamine biosynthetic process1.45E-03
30GO:0048759: xylem vessel member cell differentiation1.45E-03
31GO:0042372: phylloquinone biosynthetic process1.73E-03
32GO:0009612: response to mechanical stimulus1.73E-03
33GO:0006694: steroid biosynthetic process1.73E-03
34GO:0030497: fatty acid elongation2.04E-03
35GO:0009645: response to low light intensity stimulus2.04E-03
36GO:0010119: regulation of stomatal movement2.32E-03
37GO:0007155: cell adhesion2.36E-03
38GO:0008610: lipid biosynthetic process2.36E-03
39GO:0030091: protein repair2.36E-03
40GO:0009690: cytokinin metabolic process2.36E-03
41GO:0009826: unidimensional cell growth2.69E-03
42GO:0009808: lignin metabolic process2.69E-03
43GO:0009932: cell tip growth2.69E-03
44GO:0045337: farnesyl diphosphate biosynthetic process3.04E-03
45GO:0033384: geranyl diphosphate biosynthetic process3.04E-03
46GO:0009409: response to cold3.37E-03
47GO:1900865: chloroplast RNA modification3.41E-03
48GO:0016573: histone acetylation3.41E-03
49GO:0019538: protein metabolic process3.79E-03
50GO:0009870: defense response signaling pathway, resistance gene-dependent3.79E-03
51GO:0043069: negative regulation of programmed cell death3.79E-03
52GO:0006810: transport3.89E-03
53GO:0006816: calcium ion transport4.18E-03
54GO:0009773: photosynthetic electron transport in photosystem I4.18E-03
55GO:0019684: photosynthesis, light reaction4.18E-03
56GO:0009089: lysine biosynthetic process via diaminopimelate4.18E-03
57GO:1903507: negative regulation of nucleic acid-templated transcription4.18E-03
58GO:0015979: photosynthesis4.38E-03
59GO:0009725: response to hormone5.00E-03
60GO:0010143: cutin biosynthetic process5.44E-03
61GO:0070588: calcium ion transmembrane transport5.88E-03
62GO:0009969: xyloglucan biosynthetic process5.88E-03
63GO:0006636: unsaturated fatty acid biosynthetic process6.34E-03
64GO:0006338: chromatin remodeling6.81E-03
65GO:0007017: microtubule-based process7.30E-03
66GO:0009768: photosynthesis, light harvesting in photosystem I7.30E-03
67GO:0055114: oxidation-reduction process7.75E-03
68GO:0009814: defense response, incompatible interaction8.30E-03
69GO:2000022: regulation of jasmonic acid mediated signaling pathway8.30E-03
70GO:0019748: secondary metabolic process8.30E-03
71GO:0009294: DNA mediated transformation8.82E-03
72GO:0006284: base-excision repair9.35E-03
73GO:0019722: calcium-mediated signaling9.35E-03
74GO:0000271: polysaccharide biosynthetic process1.04E-02
75GO:0010087: phloem or xylem histogenesis1.04E-02
76GO:0007623: circadian rhythm1.08E-02
77GO:0045489: pectin biosynthetic process1.10E-02
78GO:0007166: cell surface receptor signaling pathway1.23E-02
79GO:0071554: cell wall organization or biogenesis1.28E-02
80GO:0016132: brassinosteroid biosynthetic process1.28E-02
81GO:0048235: pollen sperm cell differentiation1.34E-02
82GO:0032502: developmental process1.34E-02
83GO:1901657: glycosyl compound metabolic process1.40E-02
84GO:0007267: cell-cell signaling1.53E-02
85GO:0016126: sterol biosynthetic process1.66E-02
86GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.73E-02
87GO:0009817: defense response to fungus, incompatible interaction2.00E-02
88GO:0018298: protein-chromophore linkage2.00E-02
89GO:0000160: phosphorelay signal transduction system2.07E-02
90GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.14E-02
91GO:0009834: plant-type secondary cell wall biogenesis2.15E-02
92GO:0009407: toxin catabolic process2.15E-02
93GO:0010218: response to far red light2.15E-02
94GO:0009867: jasmonic acid mediated signaling pathway2.37E-02
95GO:0016051: carbohydrate biosynthetic process2.37E-02
96GO:0009637: response to blue light2.37E-02
97GO:0006631: fatty acid metabolic process2.68E-02
98GO:0009640: photomorphogenesis2.84E-02
99GO:0010114: response to red light2.84E-02
100GO:0009926: auxin polar transport2.84E-02
101GO:0009744: response to sucrose2.84E-02
102GO:0008643: carbohydrate transport3.00E-02
103GO:0042742: defense response to bacterium3.06E-02
104GO:0009636: response to toxic substance3.08E-02
105GO:0031347: regulation of defense response3.25E-02
106GO:0009736: cytokinin-activated signaling pathway3.51E-02
107GO:0051603: proteolysis involved in cellular protein catabolic process3.60E-02
108GO:0009742: brassinosteroid mediated signaling pathway4.70E-02
RankGO TermAdjusted P value
1GO:0010487: thermospermine synthase activity0.00E+00
2GO:0050613: delta14-sterol reductase activity0.00E+00
3GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
4GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
5GO:0050614: delta24-sterol reductase activity0.00E+00
6GO:0004089: carbonate dehydratase activity7.92E-06
7GO:0016762: xyloglucan:xyloglucosyl transferase activity7.36E-05
8GO:0080132: fatty acid alpha-hydroxylase activity1.30E-04
9GO:0008568: microtubule-severing ATPase activity1.30E-04
10GO:0016768: spermine synthase activity1.30E-04
11GO:0000170: sphingosine hydroxylase activity1.30E-04
12GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.30E-04
13GO:0016798: hydrolase activity, acting on glycosyl bonds1.61E-04
14GO:0042284: sphingolipid delta-4 desaturase activity2.99E-04
15GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase2.99E-04
16GO:0042389: omega-3 fatty acid desaturase activity2.99E-04
17GO:0102336: 3-oxo-arachidoyl-CoA synthase activity4.10E-04
18GO:0102337: 3-oxo-cerotoyl-CoA synthase activity4.10E-04
19GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity4.10E-04
20GO:0050734: hydroxycinnamoyltransferase activity4.92E-04
21GO:0003824: catalytic activity5.75E-04
22GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor7.04E-04
23GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds9.40E-04
24GO:0009922: fatty acid elongase activity1.18E-03
25GO:0008725: DNA-3-methyladenine glycosylase activity1.18E-03
26GO:0016722: oxidoreductase activity, oxidizing metal ions1.38E-03
27GO:0016208: AMP binding1.45E-03
28GO:0015250: water channel activity1.55E-03
29GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.73E-03
30GO:0051753: mannan synthase activity1.73E-03
31GO:0051920: peroxiredoxin activity1.73E-03
32GO:0008289: lipid binding1.89E-03
33GO:0016209: antioxidant activity2.36E-03
34GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.69E-03
35GO:0004337: geranyltranstransferase activity3.04E-03
36GO:0004185: serine-type carboxypeptidase activity3.26E-03
37GO:0004161: dimethylallyltranstransferase activity4.18E-03
38GO:0008378: galactosyltransferase activity4.58E-03
39GO:0005262: calcium channel activity5.00E-03
40GO:0004650: polygalacturonase activity5.68E-03
41GO:0031409: pigment binding6.34E-03
42GO:0003714: transcription corepressor activity6.81E-03
43GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity8.30E-03
44GO:0030570: pectate lyase activity8.82E-03
45GO:0008514: organic anion transmembrane transporter activity9.35E-03
46GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.00E-02
47GO:0001085: RNA polymerase II transcription factor binding1.10E-02
48GO:0004872: receptor activity1.22E-02
49GO:0042802: identical protein binding1.37E-02
50GO:0000156: phosphorelay response regulator activity1.40E-02
51GO:0005200: structural constituent of cytoskeleton1.53E-02
52GO:0016413: O-acetyltransferase activity1.59E-02
53GO:0004601: peroxidase activity1.67E-02
54GO:0016168: chlorophyll binding1.73E-02
55GO:0102483: scopolin beta-glucosidase activity1.86E-02
56GO:0005516: calmodulin binding2.11E-02
57GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.22E-02
58GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.22E-02
59GO:0003993: acid phosphatase activity2.45E-02
60GO:0016787: hydrolase activity2.51E-02
61GO:0008422: beta-glucosidase activity2.52E-02
62GO:0004871: signal transducer activity2.60E-02
63GO:0004364: glutathione transferase activity2.76E-02
64GO:0005506: iron ion binding3.00E-02
65GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.04E-02
66GO:0030599: pectinesterase activity4.32E-02
67GO:0022857: transmembrane transporter activity4.32E-02
68GO:0016746: transferase activity, transferring acyl groups4.60E-02
69GO:0016887: ATPase activity4.72E-02
70GO:0004672: protein kinase activity4.90E-02
RankGO TermAdjusted P value
1GO:0048046: apoplast9.42E-09
2GO:0031225: anchored component of membrane4.68E-07
3GO:0009505: plant-type cell wall3.46E-06
4GO:0005576: extracellular region1.55E-05
5GO:0009535: chloroplast thylakoid membrane3.10E-05
6GO:0046658: anchored component of plasma membrane3.94E-05
7GO:0005618: cell wall4.43E-05
8GO:0005886: plasma membrane9.70E-05
9GO:0042170: plastid membrane2.99E-04
10GO:0009507: chloroplast7.04E-04
11GO:0016020: membrane7.94E-04
12GO:0010319: stromule1.38E-03
13GO:0009506: plasmodesma1.82E-03
14GO:0000123: histone acetyltransferase complex2.04E-03
15GO:0045298: tubulin complex3.04E-03
16GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.04E-03
17GO:0005789: endoplasmic reticulum membrane4.17E-03
18GO:0030095: chloroplast photosystem II5.44E-03
19GO:0030176: integral component of endoplasmic reticulum membrane5.88E-03
20GO:0030076: light-harvesting complex5.88E-03
21GO:0005875: microtubule associated complex6.34E-03
22GO:0009654: photosystem II oxygen evolving complex7.30E-03
23GO:0005887: integral component of plasma membrane8.96E-03
24GO:0009941: chloroplast envelope1.00E-02
25GO:0005794: Golgi apparatus1.02E-02
26GO:0009522: photosystem I1.16E-02
27GO:0019898: extrinsic component of membrane1.22E-02
28GO:0005778: peroxisomal membrane1.53E-02
29GO:0009534: chloroplast thylakoid1.60E-02
30GO:0005667: transcription factor complex1.79E-02
31GO:0016021: integral component of membrane2.30E-02
32GO:0005773: vacuole3.53E-02
33GO:0000139: Golgi membrane4.44E-02
34GO:0009706: chloroplast inner membrane4.51E-02
35GO:0009570: chloroplast stroma4.97E-02
Gene type



Gene DE type