GO Enrichment Analysis of Co-expressed Genes with
AT5G13280
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 2 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:0071433: cell wall repair | 0.00E+00 |
| 4 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 5 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 6 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 7 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 8 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 9 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.66E-08 |
| 10 | GO:0031167: rRNA methylation | 1.49E-06 |
| 11 | GO:0001510: RNA methylation | 8.34E-06 |
| 12 | GO:0010162: seed dormancy process | 1.61E-05 |
| 13 | GO:0006364: rRNA processing | 2.48E-05 |
| 14 | GO:0055081: anion homeostasis | 2.53E-05 |
| 15 | GO:0031120: snRNA pseudouridine synthesis | 2.53E-05 |
| 16 | GO:0031118: rRNA pseudouridine synthesis | 2.53E-05 |
| 17 | GO:2000232: regulation of rRNA processing | 2.53E-05 |
| 18 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.64E-05 |
| 19 | GO:0010220: positive regulation of vernalization response | 6.44E-05 |
| 20 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 6.44E-05 |
| 21 | GO:0055129: L-proline biosynthetic process | 6.44E-05 |
| 22 | GO:0009294: DNA mediated transformation | 7.16E-05 |
| 23 | GO:0008033: tRNA processing | 9.42E-05 |
| 24 | GO:0000460: maturation of 5.8S rRNA | 2.30E-04 |
| 25 | GO:0044205: 'de novo' UMP biosynthetic process | 2.30E-04 |
| 26 | GO:0006561: proline biosynthetic process | 3.65E-04 |
| 27 | GO:0000470: maturation of LSU-rRNA | 3.65E-04 |
| 28 | GO:0006458: 'de novo' protein folding | 4.36E-04 |
| 29 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 5.11E-04 |
| 30 | GO:0006412: translation | 7.85E-04 |
| 31 | GO:0043069: negative regulation of programmed cell death | 9.24E-04 |
| 32 | GO:0070588: calcium ion transmembrane transport | 1.40E-03 |
| 33 | GO:0000027: ribosomal large subunit assembly | 1.61E-03 |
| 34 | GO:0030150: protein import into mitochondrial matrix | 1.61E-03 |
| 35 | GO:0006334: nucleosome assembly | 1.83E-03 |
| 36 | GO:0061077: chaperone-mediated protein folding | 1.83E-03 |
| 37 | GO:0006520: cellular amino acid metabolic process | 2.55E-03 |
| 38 | GO:0046686: response to cadmium ion | 3.53E-03 |
| 39 | GO:0010043: response to zinc ion | 4.99E-03 |
| 40 | GO:0000154: rRNA modification | 6.85E-03 |
| 41 | GO:0009909: regulation of flower development | 8.35E-03 |
| 42 | GO:0009651: response to salt stress | 9.33E-03 |
| 43 | GO:0016569: covalent chromatin modification | 9.54E-03 |
| 44 | GO:0042742: defense response to bacterium | 1.29E-02 |
| 45 | GO:0016036: cellular response to phosphate starvation | 1.39E-02 |
| 46 | GO:0006413: translational initiation | 1.39E-02 |
| 47 | GO:0009451: RNA modification | 1.49E-02 |
| 48 | GO:0015031: protein transport | 1.65E-02 |
| 49 | GO:0045892: negative regulation of transcription, DNA-templated | 2.67E-02 |
| 50 | GO:0032259: methylation | 2.98E-02 |
| 51 | GO:0009408: response to heat | 3.07E-02 |
| 52 | GO:0048364: root development | 3.16E-02 |
| 53 | GO:0006351: transcription, DNA-templated | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 2 | GO:0004070: aspartate carbamoyltransferase activity | 0.00E+00 |
| 3 | GO:0004735: pyrroline-5-carboxylate reductase activity | 0.00E+00 |
| 4 | GO:0030515: snoRNA binding | 1.29E-08 |
| 5 | GO:0008649: rRNA methyltransferase activity | 1.81E-07 |
| 6 | GO:0004407: histone deacetylase activity | 4.64E-05 |
| 7 | GO:0003723: RNA binding | 5.92E-05 |
| 8 | GO:0043021: ribonucleoprotein complex binding | 6.44E-05 |
| 9 | GO:0016743: carboxyl- or carbamoyltransferase activity | 6.44E-05 |
| 10 | GO:0008469: histone-arginine N-methyltransferase activity | 1.13E-04 |
| 11 | GO:0003735: structural constituent of ribosome | 1.30E-04 |
| 12 | GO:0008276: protein methyltransferase activity | 1.69E-04 |
| 13 | GO:0004017: adenylate kinase activity | 4.36E-04 |
| 14 | GO:0044183: protein binding involved in protein folding | 1.01E-03 |
| 15 | GO:0009982: pseudouridine synthase activity | 1.20E-03 |
| 16 | GO:0005388: calcium-transporting ATPase activity | 1.20E-03 |
| 17 | GO:0005528: FK506 binding | 1.61E-03 |
| 18 | GO:0003713: transcription coactivator activity | 2.55E-03 |
| 19 | GO:0016597: amino acid binding | 3.63E-03 |
| 20 | GO:0004721: phosphoprotein phosphatase activity | 4.21E-03 |
| 21 | GO:0003746: translation elongation factor activity | 5.31E-03 |
| 22 | GO:0042393: histone binding | 5.81E-03 |
| 23 | GO:0000166: nucleotide binding | 6.37E-03 |
| 24 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.04E-03 |
| 25 | GO:0005516: calmodulin binding | 9.59E-03 |
| 26 | GO:0051082: unfolded protein binding | 9.95E-03 |
| 27 | GO:0003743: translation initiation factor activity | 1.63E-02 |
| 28 | GO:0003729: mRNA binding | 1.93E-02 |
| 29 | GO:0008168: methyltransferase activity | 1.94E-02 |
| 30 | GO:0003924: GTPase activity | 3.07E-02 |
| 31 | GO:0004519: endonuclease activity | 3.26E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 4.79E-16 |
| 3 | GO:0031428: box C/D snoRNP complex | 4.36E-09 |
| 4 | GO:0070545: PeBoW complex | 4.66E-08 |
| 5 | GO:0032040: small-subunit processome | 1.40E-07 |
| 6 | GO:0005829: cytosol | 7.12E-06 |
| 7 | GO:0015030: Cajal body | 1.32E-05 |
| 8 | GO:0022626: cytosolic ribosome | 8.25E-05 |
| 9 | GO:0005773: vacuole | 1.51E-04 |
| 10 | GO:0031429: box H/ACA snoRNP complex | 1.69E-04 |
| 11 | GO:0022625: cytosolic large ribosomal subunit | 2.64E-04 |
| 12 | GO:0005840: ribosome | 3.21E-04 |
| 13 | GO:0030687: preribosome, large subunit precursor | 5.11E-04 |
| 14 | GO:0005654: nucleoplasm | 9.37E-04 |
| 15 | GO:0009506: plasmodesma | 1.01E-03 |
| 16 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.01E-03 |
| 17 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.18E-03 |
| 18 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.18E-03 |
| 19 | GO:0016592: mediator complex | 3.07E-03 |
| 20 | GO:0015934: large ribosomal subunit | 4.99E-03 |
| 21 | GO:0005834: heterotrimeric G-protein complex | 9.13E-03 |
| 22 | GO:0005774: vacuolar membrane | 9.72E-03 |
| 23 | GO:0005618: cell wall | 1.15E-02 |
| 24 | GO:0005759: mitochondrial matrix | 1.37E-02 |
| 25 | GO:0009705: plant-type vacuole membrane | 1.46E-02 |
| 26 | GO:0005739: mitochondrion | 1.46E-02 |
| 27 | GO:0005634: nucleus | 2.05E-02 |
| 28 | GO:0005743: mitochondrial inner membrane | 2.91E-02 |
| 29 | GO:0005887: integral component of plasma membrane | 3.82E-02 |