GO Enrichment Analysis of Co-expressed Genes with
AT5G13000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:0015822: ornithine transport | 0.00E+00 |
| 3 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 4 | GO:0042407: cristae formation | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0006573: valine metabolic process | 0.00E+00 |
| 7 | GO:0016123: xanthophyll biosynthetic process | 8.65E-06 |
| 8 | GO:0016117: carotenoid biosynthetic process | 1.18E-05 |
| 9 | GO:0042026: protein refolding | 1.91E-05 |
| 10 | GO:0006458: 'de novo' protein folding | 1.91E-05 |
| 11 | GO:0046686: response to cadmium ion | 3.39E-05 |
| 12 | GO:0006551: leucine metabolic process | 7.23E-05 |
| 13 | GO:0000066: mitochondrial ornithine transport | 7.23E-05 |
| 14 | GO:0010597: green leaf volatile biosynthetic process | 7.23E-05 |
| 15 | GO:0006438: valyl-tRNA aminoacylation | 7.23E-05 |
| 16 | GO:0000032: cell wall mannoprotein biosynthetic process | 7.23E-05 |
| 17 | GO:0032025: response to cobalt ion | 7.23E-05 |
| 18 | GO:0009767: photosynthetic electron transport chain | 1.27E-04 |
| 19 | GO:2000123: positive regulation of stomatal complex development | 1.74E-04 |
| 20 | GO:0006695: cholesterol biosynthetic process | 1.74E-04 |
| 21 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.74E-04 |
| 22 | GO:0009629: response to gravity | 1.74E-04 |
| 23 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.94E-04 |
| 24 | GO:0061077: chaperone-mediated protein folding | 2.53E-04 |
| 25 | GO:0007005: mitochondrion organization | 2.78E-04 |
| 26 | GO:0006696: ergosterol biosynthetic process | 2.93E-04 |
| 27 | GO:0033591: response to L-ascorbic acid | 2.93E-04 |
| 28 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.23E-04 |
| 29 | GO:0009298: GDP-mannose biosynthetic process | 4.23E-04 |
| 30 | GO:0051016: barbed-end actin filament capping | 4.23E-04 |
| 31 | GO:0006542: glutamine biosynthetic process | 5.65E-04 |
| 32 | GO:0019676: ammonia assimilation cycle | 5.65E-04 |
| 33 | GO:0009765: photosynthesis, light harvesting | 5.65E-04 |
| 34 | GO:0034440: lipid oxidation | 5.65E-04 |
| 35 | GO:2000038: regulation of stomatal complex development | 5.65E-04 |
| 36 | GO:0006546: glycine catabolic process | 5.65E-04 |
| 37 | GO:0010236: plastoquinone biosynthetic process | 7.14E-04 |
| 38 | GO:0010375: stomatal complex patterning | 7.14E-04 |
| 39 | GO:0016120: carotene biosynthetic process | 7.14E-04 |
| 40 | GO:0006796: phosphate-containing compound metabolic process | 8.73E-04 |
| 41 | GO:0006810: transport | 9.70E-04 |
| 42 | GO:0009813: flavonoid biosynthetic process | 9.91E-04 |
| 43 | GO:0009099: valine biosynthetic process | 1.04E-03 |
| 44 | GO:0009554: megasporogenesis | 1.04E-03 |
| 45 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.04E-03 |
| 46 | GO:0009082: branched-chain amino acid biosynthetic process | 1.04E-03 |
| 47 | GO:0017148: negative regulation of translation | 1.04E-03 |
| 48 | GO:0080027: response to herbivore | 1.21E-03 |
| 49 | GO:0045010: actin nucleation | 1.40E-03 |
| 50 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.40E-03 |
| 51 | GO:0052543: callose deposition in cell wall | 1.40E-03 |
| 52 | GO:0048193: Golgi vesicle transport | 1.59E-03 |
| 53 | GO:0009657: plastid organization | 1.59E-03 |
| 54 | GO:0009097: isoleucine biosynthetic process | 1.59E-03 |
| 55 | GO:0048589: developmental growth | 1.80E-03 |
| 56 | GO:0045337: farnesyl diphosphate biosynthetic process | 1.80E-03 |
| 57 | GO:0033384: geranyl diphosphate biosynthetic process | 1.80E-03 |
| 58 | GO:0043067: regulation of programmed cell death | 2.01E-03 |
| 59 | GO:0009773: photosynthetic electron transport in photosystem I | 2.46E-03 |
| 60 | GO:0006415: translational termination | 2.46E-03 |
| 61 | GO:0019684: photosynthesis, light reaction | 2.46E-03 |
| 62 | GO:0030036: actin cytoskeleton organization | 2.94E-03 |
| 63 | GO:0050826: response to freezing | 2.94E-03 |
| 64 | GO:0019253: reductive pentose-phosphate cycle | 3.19E-03 |
| 65 | GO:0007010: cytoskeleton organization | 3.98E-03 |
| 66 | GO:0006418: tRNA aminoacylation for protein translation | 4.26E-03 |
| 67 | GO:0007017: microtubule-based process | 4.26E-03 |
| 68 | GO:0009695: jasmonic acid biosynthetic process | 4.26E-03 |
| 69 | GO:0031408: oxylipin biosynthetic process | 4.54E-03 |
| 70 | GO:0080092: regulation of pollen tube growth | 4.83E-03 |
| 71 | GO:0009617: response to bacterium | 5.86E-03 |
| 72 | GO:0010197: polar nucleus fusion | 6.38E-03 |
| 73 | GO:0071554: cell wall organization or biogenesis | 7.38E-03 |
| 74 | GO:0010583: response to cyclopentenone | 7.72E-03 |
| 75 | GO:0009793: embryo development ending in seed dormancy | 8.60E-03 |
| 76 | GO:0007267: cell-cell signaling | 8.79E-03 |
| 77 | GO:0080167: response to karrikin | 9.41E-03 |
| 78 | GO:0016126: sterol biosynthetic process | 9.54E-03 |
| 79 | GO:0016311: dephosphorylation | 1.11E-02 |
| 80 | GO:0018298: protein-chromophore linkage | 1.15E-02 |
| 81 | GO:0009817: defense response to fungus, incompatible interaction | 1.15E-02 |
| 82 | GO:0048767: root hair elongation | 1.19E-02 |
| 83 | GO:0010043: response to zinc ion | 1.27E-02 |
| 84 | GO:0007568: aging | 1.27E-02 |
| 85 | GO:0055114: oxidation-reduction process | 1.31E-02 |
| 86 | GO:0006839: mitochondrial transport | 1.49E-02 |
| 87 | GO:0009753: response to jasmonic acid | 1.50E-02 |
| 88 | GO:0009926: auxin polar transport | 1.63E-02 |
| 89 | GO:0051707: response to other organism | 1.63E-02 |
| 90 | GO:0006468: protein phosphorylation | 1.75E-02 |
| 91 | GO:0006486: protein glycosylation | 2.01E-02 |
| 92 | GO:0010224: response to UV-B | 2.06E-02 |
| 93 | GO:0006096: glycolytic process | 2.26E-02 |
| 94 | GO:0009620: response to fungus | 2.42E-02 |
| 95 | GO:0009611: response to wounding | 2.53E-02 |
| 96 | GO:0042545: cell wall modification | 2.53E-02 |
| 97 | GO:0006396: RNA processing | 2.64E-02 |
| 98 | GO:0051726: regulation of cell cycle | 2.69E-02 |
| 99 | GO:0009790: embryo development | 3.38E-02 |
| 100 | GO:0006633: fatty acid biosynthetic process | 3.56E-02 |
| 101 | GO:0045490: pectin catabolic process | 3.81E-02 |
| 102 | GO:0007166: cell surface receptor signaling pathway | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030598: rRNA N-glycosylase activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 4 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 5 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 6 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 7 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.91E-05 |
| 8 | GO:0004832: valine-tRNA ligase activity | 7.23E-05 |
| 9 | GO:0045486: naringenin 3-dioxygenase activity | 7.23E-05 |
| 10 | GO:0051996: squalene synthase activity | 7.23E-05 |
| 11 | GO:0004476: mannose-6-phosphate isomerase activity | 7.23E-05 |
| 12 | GO:0003984: acetolactate synthase activity | 7.23E-05 |
| 13 | GO:0044183: protein binding involved in protein folding | 9.43E-05 |
| 14 | GO:0010291: carotene beta-ring hydroxylase activity | 1.74E-04 |
| 15 | GO:0004618: phosphoglycerate kinase activity | 1.74E-04 |
| 16 | GO:0004047: aminomethyltransferase activity | 1.74E-04 |
| 17 | GO:0004817: cysteine-tRNA ligase activity | 1.74E-04 |
| 18 | GO:0000064: L-ornithine transmembrane transporter activity | 1.74E-04 |
| 19 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.74E-04 |
| 20 | GO:0016165: linoleate 13S-lipoxygenase activity | 2.93E-04 |
| 21 | GO:0003913: DNA photolyase activity | 2.93E-04 |
| 22 | GO:0001872: (1->3)-beta-D-glucan binding | 4.23E-04 |
| 23 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.23E-04 |
| 24 | GO:0016149: translation release factor activity, codon specific | 4.23E-04 |
| 25 | GO:0019901: protein kinase binding | 4.81E-04 |
| 26 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.65E-04 |
| 27 | GO:0005200: structural constituent of cytoskeleton | 6.57E-04 |
| 28 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 6.57E-04 |
| 29 | GO:0004356: glutamate-ammonia ligase activity | 7.14E-04 |
| 30 | GO:0045431: flavonol synthase activity | 7.14E-04 |
| 31 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 7.14E-04 |
| 32 | GO:0080030: methyl indole-3-acetate esterase activity | 8.73E-04 |
| 33 | GO:0016462: pyrophosphatase activity | 8.73E-04 |
| 34 | GO:0004427: inorganic diphosphatase activity | 1.21E-03 |
| 35 | GO:0009881: photoreceptor activity | 1.21E-03 |
| 36 | GO:0003747: translation release factor activity | 1.80E-03 |
| 37 | GO:0004337: geranyltranstransferase activity | 1.80E-03 |
| 38 | GO:0004161: dimethylallyltranstransferase activity | 2.46E-03 |
| 39 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.46E-03 |
| 40 | GO:0051082: unfolded protein binding | 2.86E-03 |
| 41 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.67E-03 |
| 42 | GO:0031418: L-ascorbic acid binding | 3.98E-03 |
| 43 | GO:0004672: protein kinase activity | 4.32E-03 |
| 44 | GO:0004812: aminoacyl-tRNA ligase activity | 5.74E-03 |
| 45 | GO:0016740: transferase activity | 5.96E-03 |
| 46 | GO:0048038: quinone binding | 7.38E-03 |
| 47 | GO:0016788: hydrolase activity, acting on ester bonds | 7.73E-03 |
| 48 | GO:0051015: actin filament binding | 8.07E-03 |
| 49 | GO:0008483: transaminase activity | 8.79E-03 |
| 50 | GO:0016413: O-acetyltransferase activity | 9.16E-03 |
| 51 | GO:0016597: amino acid binding | 9.16E-03 |
| 52 | GO:0030247: polysaccharide binding | 1.07E-02 |
| 53 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.23E-02 |
| 54 | GO:0005524: ATP binding | 1.29E-02 |
| 55 | GO:0003746: translation elongation factor activity | 1.36E-02 |
| 56 | GO:0003993: acid phosphatase activity | 1.40E-02 |
| 57 | GO:0005198: structural molecule activity | 1.77E-02 |
| 58 | GO:0045330: aspartyl esterase activity | 2.16E-02 |
| 59 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.31E-02 |
| 60 | GO:0030599: pectinesterase activity | 2.47E-02 |
| 61 | GO:0003779: actin binding | 2.53E-02 |
| 62 | GO:0004674: protein serine/threonine kinase activity | 2.66E-02 |
| 63 | GO:0019843: rRNA binding | 3.03E-02 |
| 64 | GO:0005507: copper ion binding | 3.52E-02 |
| 65 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.63E-02 |
| 66 | GO:0046910: pectinesterase inhibitor activity | 3.63E-02 |
| 67 | GO:0005509: calcium ion binding | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 3 | GO:0009570: chloroplast stroma | 1.72E-10 |
| 4 | GO:0009507: chloroplast | 1.55E-07 |
| 5 | GO:0009941: chloroplast envelope | 3.64E-07 |
| 6 | GO:0009654: photosystem II oxygen evolving complex | 5.49E-06 |
| 7 | GO:0009579: thylakoid | 2.06E-05 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.45E-05 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 9.39E-05 |
| 10 | GO:0030095: chloroplast photosystem II | 1.45E-04 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 4.09E-04 |
| 12 | GO:0019898: extrinsic component of membrane | 4.81E-04 |
| 13 | GO:0022626: cytosolic ribosome | 7.82E-04 |
| 14 | GO:0009534: chloroplast thylakoid | 1.10E-03 |
| 15 | GO:0031969: chloroplast membrane | 1.37E-03 |
| 16 | GO:0005618: cell wall | 1.49E-03 |
| 17 | GO:0009539: photosystem II reaction center | 1.59E-03 |
| 18 | GO:0031225: anchored component of membrane | 1.62E-03 |
| 19 | GO:0045298: tubulin complex | 1.80E-03 |
| 20 | GO:0016324: apical plasma membrane | 2.23E-03 |
| 21 | GO:0009505: plant-type cell wall | 3.39E-03 |
| 22 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.44E-03 |
| 23 | GO:0048046: apoplast | 4.73E-03 |
| 24 | GO:0046658: anchored component of plasma membrane | 6.49E-03 |
| 25 | GO:0031977: thylakoid lumen | 1.54E-02 |
| 26 | GO:0009506: plasmodesma | 1.58E-02 |
| 27 | GO:0005856: cytoskeleton | 1.77E-02 |
| 28 | GO:0005794: Golgi apparatus | 2.79E-02 |
| 29 | GO:0010287: plastoglobule | 2.92E-02 |
| 30 | GO:0005576: extracellular region | 3.05E-02 |
| 31 | GO:0005759: mitochondrial matrix | 3.56E-02 |
| 32 | GO:0009705: plant-type vacuole membrane | 3.81E-02 |