Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G12890

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006805: xenobiotic metabolic process5.43E-06
2GO:0015914: phospholipid transport1.49E-05
3GO:0060548: negative regulation of cell death5.99E-05
4GO:0006751: glutathione catabolic process9.99E-05
5GO:0042773: ATP synthesis coupled electron transport1.46E-04
6GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.70E-04
7GO:0006002: fructose 6-phosphate metabolic process1.96E-04
8GO:0010053: root epidermal cell differentiation4.26E-04
9GO:0031348: negative regulation of defense response5.89E-04
10GO:0080092: regulation of pollen tube growth5.89E-04
11GO:0010183: pollen tube guidance8.38E-04
12GO:0016126: sterol biosynthetic process1.11E-03
13GO:0009853: photorespiration1.53E-03
14GO:0009636: response to toxic substance1.96E-03
15GO:0006979: response to oxidative stress2.03E-03
16GO:0030154: cell differentiation2.19E-03
17GO:0006096: glycolytic process2.48E-03
18GO:0007623: circadian rhythm4.06E-03
19GO:0009860: pollen tube growth5.77E-03
20GO:0045454: cell redox homeostasis7.20E-03
21GO:0009873: ethylene-activated signaling pathway9.96E-03
22GO:0006468: protein phosphorylation1.54E-02
23GO:0042742: defense response to bacterium2.06E-02
24GO:0015031: protein transport2.44E-02
25GO:0046686: response to cadmium ion2.83E-02
26GO:0009793: embryo development ending in seed dormancy3.75E-02
27GO:0016310: phosphorylation3.91E-02
28GO:0006508: proteolysis4.59E-02
29GO:0006355: regulation of transcription, DNA-templated4.89E-02
RankGO TermAdjusted P value
1GO:0000247: C-8 sterol isomerase activity0.00E+00
2GO:0047750: cholestenol delta-isomerase activity0.00E+00
3GO:0001085: RNA polymerase II transcription factor binding1.11E-05
4GO:0003840: gamma-glutamyltransferase activity2.75E-05
5GO:0036374: glutathione hydrolase activity2.75E-05
6GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.77E-05
7GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity4.27E-05
8GO:0004656: procollagen-proline 4-dioxygenase activity1.22E-04
9GO:0003872: 6-phosphofructokinase activity1.46E-04
10GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.72E-04
11GO:0003682: chromatin binding3.48E-04
12GO:0051536: iron-sulfur cluster binding4.90E-04
13GO:0031418: L-ascorbic acid binding4.90E-04
14GO:0003954: NADH dehydrogenase activity4.90E-04
15GO:0033612: receptor serine/threonine kinase binding5.55E-04
16GO:0047134: protein-disulfide reductase activity6.93E-04
17GO:0004791: thioredoxin-disulfide reductase activity8.01E-04
18GO:0008137: NADH dehydrogenase (ubiquinone) activity8.75E-04
19GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.53E-03
20GO:0051539: 4 iron, 4 sulfur cluster binding1.67E-03
21GO:0051537: 2 iron, 2 sulfur cluster binding1.91E-03
22GO:0022857: transmembrane transporter activity2.70E-03
23GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.32E-03
24GO:0009055: electron carrier activity8.75E-03
25GO:0000166: nucleotide binding1.25E-02
26GO:0005506: iron ion binding2.04E-02
27GO:0044212: transcription regulatory region DNA binding2.06E-02
28GO:0004672: protein kinase activity2.71E-02
29GO:0003700: transcription factor activity, sequence-specific DNA binding2.85E-02
30GO:0016301: kinase activity3.36E-02
31GO:0005524: ATP binding4.83E-02
RankGO TermAdjusted P value
1GO:0005667: transcription factor complex2.63E-05
2GO:0030658: transport vesicle membrane4.27E-05
3GO:0005945: 6-phosphofructokinase complex7.90E-05
4GO:0005789: endoplasmic reticulum membrane3.14E-04
5GO:0045271: respiratory chain complex I5.23E-04
6GO:0005794: Golgi apparatus1.23E-03
7GO:0005802: trans-Golgi network1.60E-03
8GO:0031902: late endosome membrane1.72E-03
9GO:0005768: endosome1.81E-03
10GO:0031966: mitochondrial membrane2.11E-03
11GO:0005747: mitochondrial respiratory chain complex I2.53E-03
12GO:0080008: Cul4-RING E3 ubiquitin ligase complex5.84E-03
13GO:0005774: vacuolar membrane6.86E-03
14GO:0016021: integral component of membrane6.92E-03
15GO:0005622: intracellular1.88E-02
16GO:0000139: Golgi membrane2.56E-02
17GO:0016020: membrane2.77E-02
Gene type



Gene DE type