Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G11260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901038: cyanidin 3-O-glucoside metabolic process0.00E+00
2GO:0010423: negative regulation of brassinosteroid biosynthetic process0.00E+00
3GO:0018316: peptide cross-linking via L-cystine0.00E+00
4GO:0009813: flavonoid biosynthetic process8.71E-06
5GO:0009698: phenylpropanoid metabolic process2.22E-05
6GO:0019605: butyrate metabolic process2.76E-05
7GO:0071454: cellular response to anoxia2.76E-05
8GO:0006083: acetate metabolic process2.76E-05
9GO:0048438: floral whorl development2.76E-05
10GO:1901537: positive regulation of DNA demethylation2.76E-05
11GO:0071555: cell wall organization3.77E-05
12GO:0010220: positive regulation of vernalization response7.01E-05
13GO:1900386: positive regulation of flavonol biosynthetic process7.01E-05
14GO:0071395: cellular response to jasmonic acid stimulus7.01E-05
15GO:0080153: negative regulation of reductive pentose-phosphate cycle7.01E-05
16GO:0009411: response to UV8.11E-05
17GO:0045489: pectin biosynthetic process1.16E-04
18GO:0009963: positive regulation of flavonoid biosynthetic process1.83E-04
19GO:0042823: pyridoxal phosphate biosynthetic process1.83E-04
20GO:0034613: cellular protein localization2.48E-04
21GO:0080167: response to karrikin2.86E-04
22GO:0006097: glyoxylate cycle3.18E-04
23GO:0071368: cellular response to cytokinin stimulus3.18E-04
24GO:0006796: phosphate-containing compound metabolic process3.92E-04
25GO:0010304: PSII associated light-harvesting complex II catabolic process3.92E-04
26GO:0042732: D-xylose metabolic process3.92E-04
27GO:0000060: protein import into nucleus, translocation3.92E-04
28GO:0010076: maintenance of floral meristem identity4.69E-04
29GO:0010077: maintenance of inflorescence meristem identity4.69E-04
30GO:0042546: cell wall biogenesis4.81E-04
31GO:0051555: flavonol biosynthetic process9.92E-04
32GO:0000272: polysaccharide catabolic process1.09E-03
33GO:0016925: protein sumoylation1.19E-03
34GO:0010582: floral meristem determinacy1.19E-03
35GO:0009718: anthocyanin-containing compound biosynthetic process1.29E-03
36GO:0010223: secondary shoot formation1.40E-03
37GO:0009934: regulation of meristem structural organization1.40E-03
38GO:0034605: cellular response to heat1.40E-03
39GO:0019253: reductive pentose-phosphate cycle1.40E-03
40GO:0019853: L-ascorbic acid biosynthetic process1.50E-03
41GO:0009225: nucleotide-sugar metabolic process1.50E-03
42GO:0009739: response to gibberellin1.62E-03
43GO:0006487: protein N-linked glycosylation1.73E-03
44GO:0019915: lipid storage1.97E-03
45GO:0040007: growth2.22E-03
46GO:0010584: pollen exine formation2.35E-03
47GO:0016117: carotenoid biosynthetic process2.48E-03
48GO:0070417: cellular response to cold2.48E-03
49GO:0009723: response to ethylene2.56E-03
50GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.16E-03
51GO:0009607: response to biotic stimulus4.22E-03
52GO:0008152: metabolic process4.44E-03
53GO:0010411: xyloglucan metabolic process4.54E-03
54GO:0009926: auxin polar transport6.82E-03
55GO:0009744: response to sucrose6.82E-03
56GO:0009416: response to light stimulus7.12E-03
57GO:0000165: MAPK cascade7.79E-03
58GO:0045893: positive regulation of transcription, DNA-templated8.17E-03
59GO:0010224: response to UV-B8.60E-03
60GO:0009909: regulation of flower development9.01E-03
61GO:0009742: brassinosteroid mediated signaling pathway1.12E-02
62GO:0009845: seed germination1.33E-02
63GO:0007623: circadian rhythm1.58E-02
64GO:0030154: cell differentiation1.58E-02
65GO:0009733: response to auxin1.62E-02
66GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.04E-02
67GO:0006351: transcription, DNA-templated2.13E-02
68GO:0044550: secondary metabolite biosynthetic process2.67E-02
69GO:0045454: cell redox homeostasis2.86E-02
70GO:0016042: lipid catabolic process3.25E-02
71GO:0009751: response to salicylic acid3.29E-02
72GO:0006629: lipid metabolic process3.32E-02
73GO:0009408: response to heat3.32E-02
74GO:0009753: response to jasmonic acid3.49E-02
75GO:0009873: ethylene-activated signaling pathway3.98E-02
76GO:0006357: regulation of transcription from RNA polymerase II promoter4.05E-02
77GO:0006355: regulation of transcription, DNA-templated4.55E-02
RankGO TermAdjusted P value
1GO:0047213: anthocyanidin 3-O-glucosyltransferase activity0.00E+00
2GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity0.00E+00
3GO:0047918: GDP-mannose 3,5-epimerase activity0.00E+00
4GO:0016711: flavonoid 3'-monooxygenase activity0.00E+00
5GO:0047760: butyrate-CoA ligase activity2.76E-05
6GO:0003987: acetate-CoA ligase activity2.76E-05
7GO:0016757: transferase activity, transferring glycosyl groups6.90E-05
8GO:0004566: beta-glucuronidase activity7.01E-05
9GO:0048531: beta-1,3-galactosyltransferase activity7.01E-05
10GO:0016759: cellulose synthase activity1.79E-04
11GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity1.83E-04
12GO:0046527: glucosyltransferase activity2.48E-04
13GO:0045430: chalcone isomerase activity2.48E-04
14GO:0016798: hydrolase activity, acting on glycosyl bonds2.56E-04
15GO:0031386: protein tag3.18E-04
16GO:0016208: AMP binding3.92E-04
17GO:0035252: UDP-xylosyltransferase activity3.92E-04
18GO:0016161: beta-amylase activity4.69E-04
19GO:0019899: enzyme binding5.49E-04
20GO:0102425: myricetin 3-O-glucosyltransferase activity5.49E-04
21GO:0102360: daphnetin 3-O-glucosyltransferase activity5.49E-04
22GO:0004427: inorganic diphosphatase activity5.49E-04
23GO:0047893: flavonol 3-O-glucosyltransferase activity6.32E-04
24GO:0080043: quercetin 3-O-glucosyltransferase activity7.93E-04
25GO:0080044: quercetin 7-O-glucosyltransferase activity7.93E-04
26GO:0016207: 4-coumarate-CoA ligase activity8.07E-04
27GO:0008327: methyl-CpG binding1.09E-03
28GO:0004860: protein kinase inhibitor activity1.09E-03
29GO:0008194: UDP-glycosyltransferase activity1.62E-03
30GO:0004176: ATP-dependent peptidase activity1.97E-03
31GO:0035251: UDP-glucosyltransferase activity1.97E-03
32GO:0046982: protein heterodimerization activity2.18E-03
33GO:0016762: xyloglucan:xyloglucosyl transferase activity3.16E-03
34GO:0008237: metallopeptidase activity3.75E-03
35GO:0008375: acetylglucosaminyltransferase activity4.38E-03
36GO:0004222: metalloendopeptidase activity5.21E-03
37GO:0051287: NAD binding7.79E-03
38GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups9.65E-03
39GO:0019825: oxygen binding1.01E-02
40GO:0004650: polygalacturonase activity1.01E-02
41GO:0016874: ligase activity1.03E-02
42GO:0015035: protein disulfide oxidoreductase activity1.10E-02
43GO:0016758: transferase activity, transferring hexosyl groups1.24E-02
44GO:0016829: lyase activity1.33E-02
45GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.38E-02
46GO:0044212: transcription regulatory region DNA binding1.45E-02
47GO:0003824: catalytic activity1.59E-02
48GO:0043565: sequence-specific DNA binding1.84E-02
49GO:0003700: transcription factor activity, sequence-specific DNA binding2.03E-02
50GO:0000287: magnesium ion binding2.13E-02
51GO:0016788: hydrolase activity, acting on ester bonds2.19E-02
52GO:0052689: carboxylic ester hydrolase activity2.70E-02
53GO:0003677: DNA binding2.72E-02
54GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.86E-02
55GO:0042803: protein homodimerization activity2.95E-02
56GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.09E-02
57GO:0009055: electron carrier activity3.49E-02
58GO:0016887: ATPase activity4.53E-02
RankGO TermAdjusted P value
1GO:0010369: chromocenter4.69E-04
2GO:0000139: Golgi membrane5.70E-04
3GO:0005765: lysosomal membrane1.09E-03
4GO:0043234: protein complex1.62E-03
5GO:0043231: intracellular membrane-bounded organelle4.44E-03
6GO:0005794: Golgi apparatus8.27E-03
7GO:0005743: mitochondrial inner membrane3.15E-02
8GO:0009535: chloroplast thylakoid membrane3.24E-02
9GO:0005774: vacuolar membrane4.99E-02
Gene type



Gene DE type