co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G09870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0080094: response to trehalose-6-phosphate	0.00E+00
3	GO:0009715: chalcone biosynthetic process	0.00E+00
4	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
5	GO:0010336: gibberellic acid homeostasis	0.00E+00
6	GO:0005996: monosaccharide metabolic process	0.00E+00
7	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
8	GO:0080167: response to karrikin	2.01E-07
9	GO:0009813: flavonoid biosynthetic process	1.22E-06
10	GO:0044209: AMP salvage	4.37E-05
11	GO:0071555: cell wall organization	7.78E-05
12	GO:0045489: pectin biosynthetic process	1.19E-04
13	GO:0007155: cell adhesion	1.53E-04
14	GO:0019510: S-adenosylhomocysteine catabolic process	1.91E-04
15	GO:1901349: glucosinolate transport	1.91E-04
16	GO:0006169: adenosine salvage	1.91E-04
17	GO:0090449: phloem glucosinolate loading	1.91E-04
18	GO:0071370: cellular response to gibberellin stimulus	1.91E-04
19	GO:0006659: phosphatidylserine biosynthetic process	1.91E-04
20	GO:0015801: aromatic amino acid transport	1.91E-04
21	GO:0000066: mitochondrial ornithine transport	1.91E-04
22	GO:0005975: carbohydrate metabolic process	2.54E-04
23	GO:0000272: polysaccharide catabolic process	3.78E-04
24	GO:0009629: response to gravity	4.29E-04
25	GO:1903338: regulation of cell wall organization or biogenesis	4.29E-04
26	GO:0033353: S-adenosylmethionine cycle	4.29E-04
27	GO:0015712: hexose phosphate transport	4.29E-04
28	GO:0007154: cell communication	4.29E-04
29	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.29E-04
30	GO:0006633: fatty acid biosynthetic process	4.70E-04
31	GO:0016051: carbohydrate biosynthetic process	5.21E-04
32	GO:0048768: root hair cell tip growth	5.55E-04
33	GO:0006000: fructose metabolic process	6.99E-04
34	GO:0017157: regulation of exocytosis	6.99E-04
35	GO:0035436: triose phosphate transmembrane transport	6.99E-04
36	GO:0005977: glycogen metabolic process	6.99E-04
37	GO:0006011: UDP-glucose metabolic process	6.99E-04
38	GO:0051016: barbed-end actin filament capping	9.97E-04
39	GO:0006168: adenine salvage	9.97E-04
40	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.97E-04
41	GO:0006166: purine ribonucleoside salvage	9.97E-04
42	GO:0006730: one-carbon metabolic process	1.00E-03
43	GO:0010224: response to UV-B	1.08E-03
44	GO:0009411: response to UV	1.09E-03
45	GO:0006857: oligopeptide transport	1.13E-03
46	GO:0016117: carotenoid biosynthetic process	1.28E-03
47	GO:0009765: photosynthesis, light harvesting	1.32E-03
48	GO:0045727: positive regulation of translation	1.32E-03
49	GO:0006546: glycine catabolic process	1.32E-03
50	GO:0015713: phosphoglycerate transport	1.32E-03
51	GO:0006021: inositol biosynthetic process	1.32E-03
52	GO:0009694: jasmonic acid metabolic process	1.32E-03
53	GO:0000271: polysaccharide biosynthetic process	1.38E-03
54	GO:0016120: carotene biosynthetic process	1.68E-03
55	GO:0016123: xanthophyll biosynthetic process	1.68E-03
56	GO:0071554: cell wall organization or biogenesis	1.83E-03
57	GO:0009635: response to herbicide	2.07E-03
58	GO:0010942: positive regulation of cell death	2.07E-03
59	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.07E-03
60	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.07E-03
61	GO:0045926: negative regulation of growth	2.49E-03
62	GO:0009094: L-phenylalanine biosynthetic process	2.49E-03
63	GO:0017148: negative regulation of translation	2.49E-03
64	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.49E-03
65	GO:0042128: nitrate assimilation	2.93E-03
66	GO:0006810: transport	3.01E-03
67	GO:0030091: protein repair	3.40E-03
68	GO:0045010: actin nucleation	3.40E-03
69	GO:0031540: regulation of anthocyanin biosynthetic process	3.40E-03
70	GO:0052543: callose deposition in cell wall	3.40E-03
71	GO:0018298: protein-chromophore linkage	3.42E-03
72	GO:0010218: response to far red light	3.77E-03
73	GO:0006002: fructose 6-phosphate metabolic process	3.88E-03
74	GO:0022900: electron transport chain	3.88E-03
75	GO:0032544: plastid translation	3.88E-03
76	GO:0006754: ATP biosynthetic process	4.40E-03
77	GO:0048589: developmental growth	4.40E-03
78	GO:0009056: catabolic process	4.40E-03
79	GO:0051555: flavonol biosynthetic process	5.48E-03
80	GO:0010114: response to red light	5.57E-03
81	GO:0042546: cell wall biogenesis	5.79E-03
82	GO:0009698: phenylpropanoid metabolic process	6.06E-03
83	GO:0009773: photosynthetic electron transport in photosystem I	6.06E-03
84	GO:0018119: peptidyl-cysteine S-nitrosylation	6.06E-03
85	GO:0016024: CDP-diacylglycerol biosynthetic process	6.66E-03
86	GO:0015706: nitrate transport	6.66E-03
87	GO:0005986: sucrose biosynthetic process	7.28E-03
88	GO:0030036: actin cytoskeleton organization	7.28E-03
89	GO:0009725: response to hormone	7.28E-03
90	GO:0006094: gluconeogenesis	7.28E-03
91	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.70E-03
92	GO:0010143: cutin biosynthetic process	7.91E-03
93	GO:0019253: reductive pentose-phosphate cycle	7.91E-03
94	GO:0010167: response to nitrate	8.57E-03
95	GO:0005985: sucrose metabolic process	8.57E-03
96	GO:0006833: water transport	9.25E-03
97	GO:0007010: cytoskeleton organization	9.94E-03
98	GO:0019953: sexual reproduction	1.07E-02
99	GO:0009695: jasmonic acid biosynthetic process	1.07E-02
100	GO:0009768: photosynthesis, light harvesting in photosystem I	1.07E-02
101	GO:0031408: oxylipin biosynthetic process	1.14E-02
102	GO:0006366: transcription from RNA polymerase II promoter	1.14E-02
103	GO:0003333: amino acid transmembrane transport	1.14E-02
104	GO:0051260: protein homooligomerization	1.14E-02
105	GO:0009294: DNA mediated transformation	1.29E-02
106	GO:0010584: pollen exine formation	1.37E-02
107	GO:0019722: calcium-mediated signaling	1.37E-02
108	GO:0008152: metabolic process	1.37E-02
109	GO:0015991: ATP hydrolysis coupled proton transport	1.53E-02
110	GO:0042631: cellular response to water deprivation	1.53E-02
111	GO:0042335: cuticle development	1.53E-02
112	GO:0080022: primary root development	1.53E-02
113	GO:0034220: ion transmembrane transport	1.53E-02
114	GO:0009741: response to brassinosteroid	1.62E-02
115	GO:0015986: ATP synthesis coupled proton transport	1.70E-02
116	GO:0009791: post-embryonic development	1.79E-02
117	GO:0019252: starch biosynthetic process	1.79E-02
118	GO:0008654: phospholipid biosynthetic process	1.79E-02
119	GO:0007623: circadian rhythm	1.86E-02
120	GO:0016032: viral process	1.97E-02
121	GO:0019761: glucosinolate biosynthetic process	1.97E-02
122	GO:0048235: pollen sperm cell differentiation	1.97E-02
123	GO:0010090: trichome morphogenesis	2.06E-02
124	GO:1901657: glycosyl compound metabolic process	2.06E-02
125	GO:0006464: cellular protein modification process	2.15E-02
126	GO:0009828: plant-type cell wall loosening	2.15E-02
127	GO:0009617: response to bacterium	2.22E-02
128	GO:0007267: cell-cell signaling	2.25E-02
129	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.54E-02
130	GO:0009611: response to wounding	2.57E-02
131	GO:0048573: photoperiodism, flowering	2.74E-02
132	GO:0051301: cell division	2.78E-02
133	GO:0016311: dephosphorylation	2.84E-02
134	GO:0016049: cell growth	2.84E-02
135	GO:0009817: defense response to fungus, incompatible interaction	2.95E-02
136	GO:0048767: root hair elongation	3.05E-02
137	GO:0006468: protein phosphorylation	3.06E-02
138	GO:0009407: toxin catabolic process	3.16E-02
139	GO:0010119: regulation of stomatal movement	3.27E-02
140	GO:0006865: amino acid transport	3.38E-02
141	GO:0009867: jasmonic acid mediated signaling pathway	3.49E-02
142	GO:0046686: response to cadmium ion	3.49E-02
143	GO:0009637: response to blue light	3.49E-02
144	GO:0006839: mitochondrial transport	3.83E-02
145	GO:0009926: auxin polar transport	4.18E-02
146	GO:0009744: response to sucrose	4.18E-02
147	GO:0009636: response to toxic substance	4.54E-02
148	GO:0006855: drug transmembrane transport	4.66E-02
149	GO:0031347: regulation of defense response	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
2	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
3	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
4	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
5	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
6	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
7	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
8	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
9	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
10	GO:0045430: chalcone isomerase activity	2.72E-05
11	GO:0016757: transferase activity, transferring glycosyl groups	4.33E-05
12	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.91E-04
13	GO:0004013: adenosylhomocysteinase activity	1.91E-04
14	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	1.91E-04
15	GO:0010313: phytochrome binding	1.91E-04
16	GO:0004001: adenosine kinase activity	1.91E-04
17	GO:0090448: glucosinolate:proton symporter activity	1.91E-04
18	GO:0004047: aminomethyltransferase activity	4.29E-04
19	GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity	4.29E-04
20	GO:0015173: aromatic amino acid transmembrane transporter activity	4.29E-04
21	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.29E-04
22	GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity	4.29E-04
23	GO:0000064: L-ornithine transmembrane transporter activity	4.29E-04
24	GO:0004512: inositol-3-phosphate synthase activity	4.29E-04
25	GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity	4.29E-04
26	GO:0048531: beta-1,3-galactosyltransferase activity	4.29E-04
27	GO:0010291: carotene beta-ring hydroxylase activity	4.29E-04
28	GO:0010297: heteropolysaccharide binding	4.29E-04
29	GO:0005215: transporter activity	4.65E-04
30	GO:0003913: DNA photolyase activity	6.99E-04
31	GO:0004148: dihydrolipoyl dehydrogenase activity	6.99E-04
32	GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity	6.99E-04
33	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	6.99E-04
34	GO:0071917: triose-phosphate transmembrane transporter activity	6.99E-04
35	GO:0031418: L-ascorbic acid binding	7.65E-04
36	GO:0048027: mRNA 5'-UTR binding	9.97E-04
37	GO:0003999: adenine phosphoribosyltransferase activity	9.97E-04
38	GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity	9.97E-04
39	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.00E-03
40	GO:0019905: syntaxin binding	1.32E-03
41	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.32E-03
42	GO:0015120: phosphoglycerate transmembrane transporter activity	1.32E-03
43	GO:0047769: arogenate dehydratase activity	1.32E-03
44	GO:0004664: prephenate dehydratase activity	1.32E-03
45	GO:0005275: amine transmembrane transporter activity	1.68E-03
46	GO:0017137: Rab GTPase binding	1.68E-03
47	GO:0045431: flavonol synthase activity	1.68E-03
48	GO:0080030: methyl indole-3-acetate esterase activity	2.07E-03
49	GO:0016758: transferase activity, transferring hexosyl groups	2.07E-03
50	GO:0000210: NAD+ diphosphatase activity	2.07E-03
51	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.07E-03
52	GO:0102229: amylopectin maltohydrolase activity	2.07E-03
53	GO:0042578: phosphoric ester hydrolase activity	2.07E-03
54	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.07E-03
55	GO:0016829: lyase activity	2.37E-03
56	GO:0016413: O-acetyltransferase activity	2.48E-03
57	GO:0051753: mannan synthase activity	2.49E-03
58	GO:0016161: beta-amylase activity	2.49E-03
59	GO:0016621: cinnamoyl-CoA reductase activity	2.93E-03
60	GO:0009881: photoreceptor activity	2.93E-03
61	GO:0043295: glutathione binding	2.93E-03
62	GO:0004672: protein kinase activity	3.01E-03
63	GO:0015297: antiporter activity	3.04E-03
64	GO:0004564: beta-fructofuranosidase activity	3.40E-03
65	GO:0016207: 4-coumarate-CoA ligase activity	4.40E-03
66	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	4.40E-03
67	GO:0004743: pyruvate kinase activity	4.93E-03
68	GO:0004575: sucrose alpha-glucosidase activity	4.93E-03
69	GO:0030955: potassium ion binding	4.93E-03
70	GO:0015112: nitrate transmembrane transporter activity	4.93E-03
71	GO:0016887: ATPase activity	5.10E-03
72	GO:0046961: proton-transporting ATPase activity, rotational mechanism	6.06E-03
73	GO:0004565: beta-galactosidase activity	7.28E-03
74	GO:0004089: carbonate dehydratase activity	7.28E-03
75	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.91E-03
76	GO:0052689: carboxylic ester hydrolase activity	8.38E-03
77	GO:0051119: sugar transmembrane transporter activity	8.57E-03
78	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.25E-03
79	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.25E-03
80	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.25E-03
81	GO:0031409: pigment binding	9.25E-03
82	GO:0004650: polygalacturonase activity	9.76E-03
83	GO:0001046: core promoter sequence-specific DNA binding	9.94E-03
84	GO:0051087: chaperone binding	1.07E-02
85	GO:0016746: transferase activity, transferring acyl groups	1.10E-02
86	GO:0004176: ATP-dependent peptidase activity	1.14E-02
87	GO:0030570: pectate lyase activity	1.29E-02
88	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.37E-02
89	GO:0005524: ATP binding	1.69E-02
90	GO:0005355: glucose transmembrane transporter activity	1.70E-02
91	GO:0050662: coenzyme binding	1.70E-02
92	GO:0019901: protein kinase binding	1.79E-02
93	GO:0004872: receptor activity	1.79E-02
94	GO:0048038: quinone binding	1.88E-02
95	GO:0008017: microtubule binding	1.94E-02
96	GO:0004518: nuclease activity	1.97E-02
97	GO:0051015: actin filament binding	2.06E-02
98	GO:0008194: UDP-glycosyltransferase activity	2.08E-02
99	GO:0016791: phosphatase activity	2.15E-02
100	GO:0008483: transaminase activity	2.25E-02
101	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.25E-02
102	GO:0008237: metallopeptidase activity	2.25E-02
103	GO:0005200: structural constituent of cytoskeleton	2.25E-02
104	GO:0016597: amino acid binding	2.34E-02
105	GO:0015250: water channel activity	2.44E-02
106	GO:0016168: chlorophyll binding	2.54E-02
107	GO:0102483: scopolin beta-glucosidase activity	2.74E-02
108	GO:0030247: polysaccharide binding	2.74E-02
109	GO:0016788: hydrolase activity, acting on ester bonds	2.93E-02
110	GO:0015238: drug transmembrane transporter activity	3.05E-02
111	GO:0005096: GTPase activator activity	3.05E-02
112	GO:0004222: metalloendopeptidase activity	3.16E-02
113	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.16E-02
114	GO:0016740: transferase activity	3.20E-02
115	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.27E-02
116	GO:0050897: cobalt ion binding	3.27E-02
117	GO:0050660: flavin adenine dinucleotide binding	3.32E-02
118	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.53E-02
119	GO:0008422: beta-glucosidase activity	3.71E-02
120	GO:0050661: NADP binding	3.83E-02
121	GO:0005507: copper ion binding	3.88E-02
122	GO:0004364: glutathione transferase activity	4.06E-02
123	GO:0051537: 2 iron, 2 sulfur cluster binding	4.41E-02
124	GO:0015293: symporter activity	4.54E-02
125	GO:0051287: NAD binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0005794: Golgi apparatus	6.95E-06
3	GO:0031225: anchored component of membrane	1.97E-04
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.33E-04
5	GO:0005886: plasma membrane	3.17E-04
6	GO:0016021: integral component of membrane	3.40E-04
7	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	4.29E-04
8	GO:0000427: plastid-encoded plastid RNA polymerase complex	4.29E-04
9	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.99E-04
10	GO:0009509: chromoplast	6.99E-04
11	GO:0000139: Golgi membrane	7.31E-04
12	GO:0005775: vacuolar lumen	9.97E-04
13	GO:0009941: chloroplast envelope	1.40E-03
14	GO:0016020: membrane	1.57E-03
15	GO:0009507: chloroplast	1.91E-03
16	GO:0009505: plant-type cell wall	2.20E-03
17	GO:0009506: plasmodesma	3.49E-03
18	GO:0005576: extracellular region	4.58E-03
19	GO:0046658: anchored component of plasma membrane	4.60E-03
20	GO:0048471: perinuclear region of cytoplasm	6.06E-03
21	GO:0048046: apoplast	6.28E-03
22	GO:0019013: viral nucleocapsid	7.28E-03
23	GO:0005753: mitochondrial proton-transporting ATP synthase complex	8.57E-03
24	GO:0030076: light-harvesting complex	8.57E-03
25	GO:0009570: chloroplast stroma	8.65E-03
26	GO:0005783: endoplasmic reticulum	1.00E-02
27	GO:0010287: plastoglobule	1.27E-02
28	GO:0009522: photosystem I	1.70E-02
29	GO:0009523: photosystem II	1.79E-02
30	GO:0005887: integral component of plasma membrane	1.79E-02
31	GO:0009705: plant-type vacuole membrane	1.86E-02
32	GO:0005618: cell wall	2.07E-02
33	GO:0010319: stromule	2.25E-02
34	GO:0009534: chloroplast thylakoid	3.16E-02
35	GO:0000325: plant-type vacuole	3.27E-02
36	GO:0031969: chloroplast membrane	3.56E-02
37	GO:0005773: vacuole	3.56E-02
38	GO:0031902: late endosome membrane	3.94E-02
39	GO:0005802: trans-Golgi network	4.48E-02
40	GO:0005856: cytoskeleton	4.54E-02
41	GO:0005743: mitochondrial inner membrane	4.86E-02