GO Enrichment Analysis of Co-expressed Genes with
AT5G09820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042407: cristae formation | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0006573: valine metabolic process | 0.00E+00 |
| 4 | GO:2000605: positive regulation of secondary growth | 0.00E+00 |
| 5 | GO:0009946: proximal/distal axis specification | 0.00E+00 |
| 6 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 7 | GO:0015822: ornithine transport | 0.00E+00 |
| 8 | GO:0042026: protein refolding | 5.20E-07 |
| 9 | GO:0019253: reductive pentose-phosphate cycle | 1.29E-05 |
| 10 | GO:0016117: carotenoid biosynthetic process | 5.38E-05 |
| 11 | GO:0006458: 'de novo' protein folding | 5.87E-05 |
| 12 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.35E-04 |
| 13 | GO:0006438: valyl-tRNA aminoacylation | 1.46E-04 |
| 14 | GO:0003002: regionalization | 1.46E-04 |
| 15 | GO:0006551: leucine metabolic process | 1.46E-04 |
| 16 | GO:0000066: mitochondrial ornithine transport | 1.46E-04 |
| 17 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.46E-04 |
| 18 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.33E-04 |
| 19 | GO:0006423: cysteinyl-tRNA aminoacylation | 3.33E-04 |
| 20 | GO:0019388: galactose catabolic process | 3.33E-04 |
| 21 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.33E-04 |
| 22 | GO:0080183: response to photooxidative stress | 3.33E-04 |
| 23 | GO:2000123: positive regulation of stomatal complex development | 3.33E-04 |
| 24 | GO:0010270: photosystem II oxygen evolving complex assembly | 3.33E-04 |
| 25 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.33E-04 |
| 26 | GO:0043039: tRNA aminoacylation | 3.33E-04 |
| 27 | GO:0006006: glucose metabolic process | 3.41E-04 |
| 28 | GO:0009767: photosynthetic electron transport chain | 3.41E-04 |
| 29 | GO:0010020: chloroplast fission | 3.85E-04 |
| 30 | GO:0046686: response to cadmium ion | 4.24E-04 |
| 31 | GO:2000082: regulation of L-ascorbic acid biosynthetic process | 5.47E-04 |
| 32 | GO:0006696: ergosterol biosynthetic process | 5.47E-04 |
| 33 | GO:0010338: leaf formation | 5.47E-04 |
| 34 | GO:0006418: tRNA aminoacylation for protein translation | 5.87E-04 |
| 35 | GO:0061077: chaperone-mediated protein folding | 6.43E-04 |
| 36 | GO:0009735: response to cytokinin | 6.61E-04 |
| 37 | GO:0007005: mitochondrion organization | 7.02E-04 |
| 38 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 7.83E-04 |
| 39 | GO:0033014: tetrapyrrole biosynthetic process | 7.83E-04 |
| 40 | GO:0009590: detection of gravity | 7.83E-04 |
| 41 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.83E-04 |
| 42 | GO:0051085: chaperone mediated protein folding requiring cofactor | 7.83E-04 |
| 43 | GO:0010239: chloroplast mRNA processing | 7.83E-04 |
| 44 | GO:2000038: regulation of stomatal complex development | 1.04E-03 |
| 45 | GO:0006546: glycine catabolic process | 1.04E-03 |
| 46 | GO:0006542: glutamine biosynthetic process | 1.04E-03 |
| 47 | GO:0006479: protein methylation | 1.04E-03 |
| 48 | GO:0019676: ammonia assimilation cycle | 1.04E-03 |
| 49 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.04E-03 |
| 50 | GO:0045088: regulation of innate immune response | 1.04E-03 |
| 51 | GO:0016123: xanthophyll biosynthetic process | 1.31E-03 |
| 52 | GO:0010375: stomatal complex patterning | 1.31E-03 |
| 53 | GO:0006810: transport | 1.41E-03 |
| 54 | GO:1901259: chloroplast rRNA processing | 1.93E-03 |
| 55 | GO:0009082: branched-chain amino acid biosynthetic process | 1.93E-03 |
| 56 | GO:0009099: valine biosynthetic process | 1.93E-03 |
| 57 | GO:0006826: iron ion transport | 2.27E-03 |
| 58 | GO:0006880: intracellular sequestering of iron ion | 2.27E-03 |
| 59 | GO:0006955: immune response | 2.27E-03 |
| 60 | GO:0008610: lipid biosynthetic process | 2.63E-03 |
| 61 | GO:0005978: glycogen biosynthetic process | 2.63E-03 |
| 62 | GO:0010439: regulation of glucosinolate biosynthetic process | 2.63E-03 |
| 63 | GO:0052543: callose deposition in cell wall | 2.63E-03 |
| 64 | GO:0048564: photosystem I assembly | 2.63E-03 |
| 65 | GO:0048193: Golgi vesicle transport | 3.00E-03 |
| 66 | GO:0009657: plastid organization | 3.00E-03 |
| 67 | GO:0009097: isoleucine biosynthetic process | 3.00E-03 |
| 68 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 3.00E-03 |
| 69 | GO:0006783: heme biosynthetic process | 3.40E-03 |
| 70 | GO:0048589: developmental growth | 3.40E-03 |
| 71 | GO:0009658: chloroplast organization | 3.47E-03 |
| 72 | GO:0009416: response to light stimulus | 3.52E-03 |
| 73 | GO:0008356: asymmetric cell division | 3.81E-03 |
| 74 | GO:0043067: regulation of programmed cell death | 3.81E-03 |
| 75 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.81E-03 |
| 76 | GO:0009744: response to sucrose | 3.83E-03 |
| 77 | GO:0006535: cysteine biosynthetic process from serine | 4.23E-03 |
| 78 | GO:0009773: photosynthetic electron transport in photosystem I | 4.67E-03 |
| 79 | GO:0006415: translational termination | 4.67E-03 |
| 80 | GO:0019684: photosynthesis, light reaction | 4.67E-03 |
| 81 | GO:0006879: cellular iron ion homeostasis | 4.67E-03 |
| 82 | GO:0000272: polysaccharide catabolic process | 4.67E-03 |
| 83 | GO:0048229: gametophyte development | 4.67E-03 |
| 84 | GO:0045037: protein import into chloroplast stroma | 5.13E-03 |
| 85 | GO:0006096: glycolytic process | 6.08E-03 |
| 86 | GO:0010207: photosystem II assembly | 6.09E-03 |
| 87 | GO:0010039: response to iron ion | 6.59E-03 |
| 88 | GO:0007010: cytoskeleton organization | 7.63E-03 |
| 89 | GO:0009944: polarity specification of adaxial/abaxial axis | 7.63E-03 |
| 90 | GO:0019344: cysteine biosynthetic process | 7.63E-03 |
| 91 | GO:0016998: cell wall macromolecule catabolic process | 8.73E-03 |
| 92 | GO:0006730: one-carbon metabolic process | 9.30E-03 |
| 93 | GO:0080092: regulation of pollen tube growth | 9.30E-03 |
| 94 | GO:0009625: response to insect | 9.89E-03 |
| 95 | GO:0006284: base-excision repair | 1.05E-02 |
| 96 | GO:0009790: embryo development | 1.07E-02 |
| 97 | GO:0009793: embryo development ending in seed dormancy | 1.15E-02 |
| 98 | GO:0006633: fatty acid biosynthetic process | 1.15E-02 |
| 99 | GO:0008360: regulation of cell shape | 1.24E-02 |
| 100 | GO:0010197: polar nucleus fusion | 1.24E-02 |
| 101 | GO:0009741: response to brassinosteroid | 1.24E-02 |
| 102 | GO:0009646: response to absence of light | 1.30E-02 |
| 103 | GO:0010183: pollen tube guidance | 1.37E-02 |
| 104 | GO:0019252: starch biosynthetic process | 1.37E-02 |
| 105 | GO:0055072: iron ion homeostasis | 1.37E-02 |
| 106 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.43E-02 |
| 107 | GO:0000302: response to reactive oxygen species | 1.43E-02 |
| 108 | GO:0032502: developmental process | 1.50E-02 |
| 109 | GO:0007267: cell-cell signaling | 1.72E-02 |
| 110 | GO:0010286: heat acclimation | 1.72E-02 |
| 111 | GO:0009615: response to virus | 1.86E-02 |
| 112 | GO:0009627: systemic acquired resistance | 2.01E-02 |
| 113 | GO:0009860: pollen tube growth | 2.12E-02 |
| 114 | GO:0009817: defense response to fungus, incompatible interaction | 2.25E-02 |
| 115 | GO:0018298: protein-chromophore linkage | 2.25E-02 |
| 116 | GO:0008219: cell death | 2.25E-02 |
| 117 | GO:0048767: root hair elongation | 2.33E-02 |
| 118 | GO:0009407: toxin catabolic process | 2.41E-02 |
| 119 | GO:0007568: aging | 2.49E-02 |
| 120 | GO:0009853: photorespiration | 2.66E-02 |
| 121 | GO:0034599: cellular response to oxidative stress | 2.75E-02 |
| 122 | GO:0006839: mitochondrial transport | 2.92E-02 |
| 123 | GO:0009636: response to toxic substance | 3.47E-02 |
| 124 | GO:0009965: leaf morphogenesis | 3.47E-02 |
| 125 | GO:0006281: DNA repair | 3.60E-02 |
| 126 | GO:0006629: lipid metabolic process | 3.60E-02 |
| 127 | GO:0009846: pollen germination | 3.75E-02 |
| 128 | GO:0042538: hyperosmotic salinity response | 3.75E-02 |
| 129 | GO:0009753: response to jasmonic acid | 3.86E-02 |
| 130 | GO:0008152: metabolic process | 3.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 2 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 3 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 5 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 6 | GO:0044183: protein binding involved in protein folding | 6.50E-06 |
| 7 | GO:0051082: unfolded protein binding | 8.03E-06 |
| 8 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 5.87E-05 |
| 9 | GO:0004831: tyrosine-tRNA ligase activity | 1.46E-04 |
| 10 | GO:0004325: ferrochelatase activity | 1.46E-04 |
| 11 | GO:0051996: squalene synthase activity | 1.46E-04 |
| 12 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 1.46E-04 |
| 13 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 1.46E-04 |
| 14 | GO:0003984: acetolactate synthase activity | 1.46E-04 |
| 15 | GO:0004832: valine-tRNA ligase activity | 1.46E-04 |
| 16 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 1.46E-04 |
| 17 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 1.46E-04 |
| 18 | GO:0042834: peptidoglycan binding | 1.46E-04 |
| 19 | GO:0000064: L-ornithine transmembrane transporter activity | 3.33E-04 |
| 20 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.33E-04 |
| 21 | GO:0004614: phosphoglucomutase activity | 3.33E-04 |
| 22 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 3.33E-04 |
| 23 | GO:0050017: L-3-cyanoalanine synthase activity | 3.33E-04 |
| 24 | GO:0010291: carotene beta-ring hydroxylase activity | 3.33E-04 |
| 25 | GO:0016868: intramolecular transferase activity, phosphotransferases | 3.33E-04 |
| 26 | GO:0004618: phosphoglycerate kinase activity | 3.33E-04 |
| 27 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.33E-04 |
| 28 | GO:0004047: aminomethyltransferase activity | 3.33E-04 |
| 29 | GO:0004312: fatty acid synthase activity | 3.33E-04 |
| 30 | GO:0004817: cysteine-tRNA ligase activity | 3.33E-04 |
| 31 | GO:0031072: heat shock protein binding | 3.41E-04 |
| 32 | GO:0003913: DNA photolyase activity | 5.47E-04 |
| 33 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.47E-04 |
| 34 | GO:0004751: ribose-5-phosphate isomerase activity | 5.47E-04 |
| 35 | GO:0030267: glyoxylate reductase (NADP) activity | 5.47E-04 |
| 36 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 5.47E-04 |
| 37 | GO:0016149: translation release factor activity, codon specific | 7.83E-04 |
| 38 | GO:0008199: ferric iron binding | 7.83E-04 |
| 39 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 7.83E-04 |
| 40 | GO:0001872: (1->3)-beta-D-glucan binding | 7.83E-04 |
| 41 | GO:0004322: ferroxidase activity | 7.83E-04 |
| 42 | GO:0008276: protein methyltransferase activity | 7.83E-04 |
| 43 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 7.83E-04 |
| 44 | GO:0004812: aminoacyl-tRNA ligase activity | 8.94E-04 |
| 45 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.04E-03 |
| 46 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.04E-03 |
| 47 | GO:0030414: peptidase inhibitor activity | 1.31E-03 |
| 48 | GO:0004356: glutamate-ammonia ligase activity | 1.31E-03 |
| 49 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.31E-03 |
| 50 | GO:0008374: O-acyltransferase activity | 1.31E-03 |
| 51 | GO:0102229: amylopectin maltohydrolase activity | 1.61E-03 |
| 52 | GO:0080030: methyl indole-3-acetate esterase activity | 1.61E-03 |
| 53 | GO:0016597: amino acid binding | 1.71E-03 |
| 54 | GO:0016161: beta-amylase activity | 1.93E-03 |
| 55 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.93E-03 |
| 56 | GO:0004124: cysteine synthase activity | 1.93E-03 |
| 57 | GO:0009881: photoreceptor activity | 2.27E-03 |
| 58 | GO:0043295: glutathione binding | 2.27E-03 |
| 59 | GO:0004033: aldo-keto reductase (NADP) activity | 2.63E-03 |
| 60 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.63E-03 |
| 61 | GO:0003843: 1,3-beta-D-glucan synthase activity | 3.00E-03 |
| 62 | GO:0003747: translation release factor activity | 3.40E-03 |
| 63 | GO:0005524: ATP binding | 3.91E-03 |
| 64 | GO:0051287: NAD binding | 4.63E-03 |
| 65 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.67E-03 |
| 66 | GO:0016740: transferase activity | 4.76E-03 |
| 67 | GO:0008081: phosphoric diester hydrolase activity | 5.60E-03 |
| 68 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 6.28E-03 |
| 69 | GO:0005528: FK506 binding | 7.63E-03 |
| 70 | GO:0019843: rRNA binding | 9.17E-03 |
| 71 | GO:0003756: protein disulfide isomerase activity | 1.05E-02 |
| 72 | GO:0019901: protein kinase binding | 1.37E-02 |
| 73 | GO:0048038: quinone binding | 1.43E-02 |
| 74 | GO:0004674: protein serine/threonine kinase activity | 1.51E-02 |
| 75 | GO:0008483: transaminase activity | 1.72E-02 |
| 76 | GO:0005200: structural constituent of cytoskeleton | 1.72E-02 |
| 77 | GO:0016788: hydrolase activity, acting on ester bonds | 2.01E-02 |
| 78 | GO:0030247: polysaccharide binding | 2.09E-02 |
| 79 | GO:0050897: cobalt ion binding | 2.49E-02 |
| 80 | GO:0050661: NADP binding | 2.92E-02 |
| 81 | GO:0004364: glutathione transferase activity | 3.10E-02 |
| 82 | GO:0016787: hydrolase activity | 3.19E-02 |
| 83 | GO:0005509: calcium ion binding | 3.39E-02 |
| 84 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.56E-02 |
| 85 | GO:0003824: catalytic activity | 4.20E-02 |
| 86 | GO:0022857: transmembrane transporter activity | 4.85E-02 |
| 87 | GO:0003779: actin binding | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 3 | GO:0009571: proplastid stroma | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 2.37E-19 |
| 5 | GO:0009570: chloroplast stroma | 2.21E-15 |
| 6 | GO:0009941: chloroplast envelope | 1.54E-13 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 1.32E-09 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.73E-06 |
| 9 | GO:0010319: stromule | 5.70E-06 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.76E-04 |
| 11 | GO:0030095: chloroplast photosystem II | 3.85E-04 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 5.87E-04 |
| 13 | GO:0005960: glycine cleavage complex | 7.83E-04 |
| 14 | GO:0031969: chloroplast membrane | 8.23E-04 |
| 15 | GO:0009579: thylakoid | 1.05E-03 |
| 16 | GO:0009534: chloroplast thylakoid | 1.07E-03 |
| 17 | GO:0019898: extrinsic component of membrane | 1.19E-03 |
| 18 | GO:0055035: plastid thylakoid membrane | 1.31E-03 |
| 19 | GO:0000793: condensed chromosome | 1.61E-03 |
| 20 | GO:0048046: apoplast | 2.73E-03 |
| 21 | GO:0000148: 1,3-beta-D-glucan synthase complex | 3.00E-03 |
| 22 | GO:0022626: cytosolic ribosome | 3.29E-03 |
| 23 | GO:0009536: plastid | 3.79E-03 |
| 24 | GO:0016324: apical plasma membrane | 4.23E-03 |
| 25 | GO:0005856: cytoskeleton | 4.30E-03 |
| 26 | GO:0009508: plastid chromosome | 5.60E-03 |
| 27 | GO:0005886: plasma membrane | 7.29E-03 |
| 28 | GO:0046658: anchored component of plasma membrane | 1.68E-02 |
| 29 | GO:0009295: nucleoid | 1.72E-02 |
| 30 | GO:0005778: peroxisomal membrane | 1.72E-02 |
| 31 | GO:0009707: chloroplast outer membrane | 2.25E-02 |
| 32 | GO:0031977: thylakoid lumen | 3.01E-02 |
| 33 | GO:0090406: pollen tube | 3.19E-02 |
| 34 | GO:0005829: cytosol | 3.71E-02 |
| 35 | GO:0005747: mitochondrial respiratory chain complex I | 4.54E-02 |