GO Enrichment Analysis of Co-expressed Genes with
AT5G09650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 4 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0042407: cristae formation | 0.00E+00 |
| 6 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 7 | GO:0006573: valine metabolic process | 0.00E+00 |
| 8 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 9 | GO:0006546: glycine catabolic process | 2.11E-05 |
| 10 | GO:0006631: fatty acid metabolic process | 4.15E-05 |
| 11 | GO:0010190: cytochrome b6f complex assembly | 5.10E-05 |
| 12 | GO:0042026: protein refolding | 7.14E-05 |
| 13 | GO:0006551: leucine metabolic process | 1.64E-04 |
| 14 | GO:0071258: cellular response to gravity | 3.73E-04 |
| 15 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.73E-04 |
| 16 | GO:2000123: positive regulation of stomatal complex development | 3.73E-04 |
| 17 | GO:0010424: DNA methylation on cytosine within a CG sequence | 3.73E-04 |
| 18 | GO:0043039: tRNA aminoacylation | 3.73E-04 |
| 19 | GO:0006695: cholesterol biosynthetic process | 3.73E-04 |
| 20 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 3.73E-04 |
| 21 | GO:0006423: cysteinyl-tRNA aminoacylation | 3.73E-04 |
| 22 | GO:0010020: chloroplast fission | 4.55E-04 |
| 23 | GO:0006065: UDP-glucuronate biosynthetic process | 6.11E-04 |
| 24 | GO:0006000: fructose metabolic process | 6.11E-04 |
| 25 | GO:0006518: peptide metabolic process | 6.11E-04 |
| 26 | GO:0006418: tRNA aminoacylation for protein translation | 6.90E-04 |
| 27 | GO:0007017: microtubule-based process | 6.90E-04 |
| 28 | GO:0007005: mitochondrion organization | 8.26E-04 |
| 29 | GO:0055114: oxidation-reduction process | 8.61E-04 |
| 30 | GO:0043572: plastid fission | 8.73E-04 |
| 31 | GO:0051085: chaperone mediated protein folding requiring cofactor | 8.73E-04 |
| 32 | GO:0006241: CTP biosynthetic process | 8.73E-04 |
| 33 | GO:0046902: regulation of mitochondrial membrane permeability | 8.73E-04 |
| 34 | GO:0006165: nucleoside diphosphate phosphorylation | 8.73E-04 |
| 35 | GO:0006228: UTP biosynthetic process | 8.73E-04 |
| 36 | GO:0006424: glutamyl-tRNA aminoacylation | 8.73E-04 |
| 37 | GO:0009735: response to cytokinin | 8.92E-04 |
| 38 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 8.97E-04 |
| 39 | GO:0016117: carotenoid biosynthetic process | 1.05E-03 |
| 40 | GO:0010037: response to carbon dioxide | 1.16E-03 |
| 41 | GO:0006808: regulation of nitrogen utilization | 1.16E-03 |
| 42 | GO:0015976: carbon utilization | 1.16E-03 |
| 43 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.16E-03 |
| 44 | GO:0009765: photosynthesis, light harvesting | 1.16E-03 |
| 45 | GO:0006085: acetyl-CoA biosynthetic process | 1.16E-03 |
| 46 | GO:0006183: GTP biosynthetic process | 1.16E-03 |
| 47 | GO:2000122: negative regulation of stomatal complex development | 1.16E-03 |
| 48 | GO:2000038: regulation of stomatal complex development | 1.16E-03 |
| 49 | GO:0032543: mitochondrial translation | 1.47E-03 |
| 50 | GO:0016123: xanthophyll biosynthetic process | 1.47E-03 |
| 51 | GO:0010375: stomatal complex patterning | 1.47E-03 |
| 52 | GO:0016120: carotene biosynthetic process | 1.47E-03 |
| 53 | GO:0010583: response to cyclopentenone | 1.59E-03 |
| 54 | GO:0009828: plant-type cell wall loosening | 1.80E-03 |
| 55 | GO:0006555: methionine metabolic process | 1.80E-03 |
| 56 | GO:0007267: cell-cell signaling | 1.91E-03 |
| 57 | GO:0006458: 'de novo' protein folding | 2.17E-03 |
| 58 | GO:0009099: valine biosynthetic process | 2.17E-03 |
| 59 | GO:0010555: response to mannitol | 2.17E-03 |
| 60 | GO:0009955: adaxial/abaxial pattern specification | 2.17E-03 |
| 61 | GO:1901259: chloroplast rRNA processing | 2.17E-03 |
| 62 | GO:0009082: branched-chain amino acid biosynthetic process | 2.17E-03 |
| 63 | GO:0000105: histidine biosynthetic process | 2.95E-03 |
| 64 | GO:0007155: cell adhesion | 2.95E-03 |
| 65 | GO:0008610: lipid biosynthetic process | 2.95E-03 |
| 66 | GO:0009642: response to light intensity | 2.95E-03 |
| 67 | GO:0009097: isoleucine biosynthetic process | 3.37E-03 |
| 68 | GO:0032544: plastid translation | 3.37E-03 |
| 69 | GO:0009932: cell tip growth | 3.37E-03 |
| 70 | GO:0006002: fructose 6-phosphate metabolic process | 3.37E-03 |
| 71 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 3.37E-03 |
| 72 | GO:0048193: Golgi vesicle transport | 3.37E-03 |
| 73 | GO:0009657: plastid organization | 3.37E-03 |
| 74 | GO:0016051: carbohydrate biosynthetic process | 3.52E-03 |
| 75 | GO:0033384: geranyl diphosphate biosynthetic process | 3.81E-03 |
| 76 | GO:0048589: developmental growth | 3.81E-03 |
| 77 | GO:0045337: farnesyl diphosphate biosynthetic process | 3.81E-03 |
| 78 | GO:0010206: photosystem II repair | 3.81E-03 |
| 79 | GO:0043067: regulation of programmed cell death | 4.27E-03 |
| 80 | GO:0035999: tetrahydrofolate interconversion | 4.27E-03 |
| 81 | GO:0006349: regulation of gene expression by genetic imprinting | 4.27E-03 |
| 82 | GO:0009658: chloroplast organization | 4.31E-03 |
| 83 | GO:0043069: negative regulation of programmed cell death | 4.75E-03 |
| 84 | GO:0006949: syncytium formation | 4.75E-03 |
| 85 | GO:0009793: embryo development ending in seed dormancy | 4.87E-03 |
| 86 | GO:0010216: maintenance of DNA methylation | 5.25E-03 |
| 87 | GO:0009773: photosynthetic electron transport in photosystem I | 5.25E-03 |
| 88 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.25E-03 |
| 89 | GO:0009664: plant-type cell wall organization | 5.68E-03 |
| 90 | GO:0045037: protein import into chloroplast stroma | 5.77E-03 |
| 91 | GO:0050826: response to freezing | 6.30E-03 |
| 92 | GO:0006094: gluconeogenesis | 6.30E-03 |
| 93 | GO:0005986: sucrose biosynthetic process | 6.30E-03 |
| 94 | GO:0019253: reductive pentose-phosphate cycle | 6.85E-03 |
| 95 | GO:0010207: photosystem II assembly | 6.85E-03 |
| 96 | GO:0045454: cell redox homeostasis | 7.12E-03 |
| 97 | GO:0046686: response to cadmium ion | 7.77E-03 |
| 98 | GO:0019344: cysteine biosynthetic process | 8.59E-03 |
| 99 | GO:0007010: cytoskeleton organization | 8.59E-03 |
| 100 | GO:0061077: chaperone-mediated protein folding | 9.84E-03 |
| 101 | GO:0006730: one-carbon metabolic process | 1.05E-02 |
| 102 | GO:0009294: DNA mediated transformation | 1.11E-02 |
| 103 | GO:0009411: response to UV | 1.11E-02 |
| 104 | GO:0019722: calcium-mediated signaling | 1.18E-02 |
| 105 | GO:0000271: polysaccharide biosynthetic process | 1.32E-02 |
| 106 | GO:0000413: protein peptidyl-prolyl isomerization | 1.32E-02 |
| 107 | GO:0042742: defense response to bacterium | 1.33E-02 |
| 108 | GO:0006633: fatty acid biosynthetic process | 1.37E-02 |
| 109 | GO:0010197: polar nucleus fusion | 1.39E-02 |
| 110 | GO:0045489: pectin biosynthetic process | 1.39E-02 |
| 111 | GO:0008360: regulation of cell shape | 1.39E-02 |
| 112 | GO:0019252: starch biosynthetic process | 1.54E-02 |
| 113 | GO:0071554: cell wall organization or biogenesis | 1.62E-02 |
| 114 | GO:0009409: response to cold | 2.09E-02 |
| 115 | GO:0016126: sterol biosynthetic process | 2.10E-02 |
| 116 | GO:0009826: unidimensional cell growth | 2.25E-02 |
| 117 | GO:0009627: systemic acquired resistance | 2.27E-02 |
| 118 | GO:0016311: dephosphorylation | 2.45E-02 |
| 119 | GO:0006508: proteolysis | 2.49E-02 |
| 120 | GO:0018298: protein-chromophore linkage | 2.54E-02 |
| 121 | GO:0008219: cell death | 2.54E-02 |
| 122 | GO:0048481: plant ovule development | 2.54E-02 |
| 123 | GO:0048767: root hair elongation | 2.63E-02 |
| 124 | GO:0009813: flavonoid biosynthetic process | 2.63E-02 |
| 125 | GO:0009910: negative regulation of flower development | 2.82E-02 |
| 126 | GO:0010119: regulation of stomatal movement | 2.82E-02 |
| 127 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.99E-02 |
| 128 | GO:0006839: mitochondrial transport | 3.30E-02 |
| 129 | GO:0042542: response to hydrogen peroxide | 3.50E-02 |
| 130 | GO:0051707: response to other organism | 3.60E-02 |
| 131 | GO:0009585: red, far-red light phototransduction | 4.45E-02 |
| 132 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 2 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
| 5 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 6 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 7 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 8 | GO:0051920: peroxiredoxin activity | 7.06E-07 |
| 9 | GO:0016209: antioxidant activity | 1.77E-06 |
| 10 | GO:0003984: acetolactate synthase activity | 1.64E-04 |
| 11 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 1.64E-04 |
| 12 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.64E-04 |
| 13 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.64E-04 |
| 14 | GO:0004831: tyrosine-tRNA ligase activity | 1.64E-04 |
| 15 | GO:0005200: structural constituent of cytoskeleton | 1.73E-04 |
| 16 | GO:0044183: protein binding involved in protein folding | 3.08E-04 |
| 17 | GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity | 3.73E-04 |
| 18 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.73E-04 |
| 19 | GO:0004047: aminomethyltransferase activity | 3.73E-04 |
| 20 | GO:0004817: cysteine-tRNA ligase activity | 3.73E-04 |
| 21 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.73E-04 |
| 22 | GO:0030267: glyoxylate reductase (NADP) activity | 6.11E-04 |
| 23 | GO:0070402: NADPH binding | 6.11E-04 |
| 24 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 6.11E-04 |
| 25 | GO:0070330: aromatase activity | 6.11E-04 |
| 26 | GO:0017150: tRNA dihydrouridine synthase activity | 6.11E-04 |
| 27 | GO:0003913: DNA photolyase activity | 6.11E-04 |
| 28 | GO:0002161: aminoacyl-tRNA editing activity | 6.11E-04 |
| 29 | GO:0005504: fatty acid binding | 6.11E-04 |
| 30 | GO:0004550: nucleoside diphosphate kinase activity | 8.73E-04 |
| 31 | GO:0003878: ATP citrate synthase activity | 8.73E-04 |
| 32 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 8.73E-04 |
| 33 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 8.73E-04 |
| 34 | GO:0004812: aminoacyl-tRNA ligase activity | 1.05E-03 |
| 35 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.16E-03 |
| 36 | GO:0045430: chalcone isomerase activity | 1.16E-03 |
| 37 | GO:0018685: alkane 1-monooxygenase activity | 1.47E-03 |
| 38 | GO:0005471: ATP:ADP antiporter activity | 1.47E-03 |
| 39 | GO:0019843: rRNA binding | 1.65E-03 |
| 40 | GO:0080030: methyl indole-3-acetate esterase activity | 1.80E-03 |
| 41 | GO:0042578: phosphoric ester hydrolase activity | 1.80E-03 |
| 42 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.91E-03 |
| 43 | GO:0102391: decanoate--CoA ligase activity | 2.17E-03 |
| 44 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.17E-03 |
| 45 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.17E-03 |
| 46 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.55E-03 |
| 47 | GO:0009881: photoreceptor activity | 2.55E-03 |
| 48 | GO:0004222: metalloendopeptidase activity | 3.07E-03 |
| 49 | GO:0003843: 1,3-beta-D-glucan synthase activity | 3.37E-03 |
| 50 | GO:0004337: geranyltranstransferase activity | 3.81E-03 |
| 51 | GO:0004601: peroxidase activity | 4.31E-03 |
| 52 | GO:0004161: dimethylallyltranstransferase activity | 5.25E-03 |
| 53 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.28E-03 |
| 54 | GO:0000049: tRNA binding | 5.77E-03 |
| 55 | GO:0004089: carbonate dehydratase activity | 6.30E-03 |
| 56 | GO:0004565: beta-galactosidase activity | 6.30E-03 |
| 57 | GO:0005507: copper ion binding | 7.80E-03 |
| 58 | GO:0005528: FK506 binding | 8.59E-03 |
| 59 | GO:0051082: unfolded protein binding | 8.68E-03 |
| 60 | GO:0004176: ATP-dependent peptidase activity | 9.84E-03 |
| 61 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.05E-02 |
| 62 | GO:0030570: pectate lyase activity | 1.11E-02 |
| 63 | GO:0003735: structural constituent of ribosome | 1.19E-02 |
| 64 | GO:0019901: protein kinase binding | 1.54E-02 |
| 65 | GO:0008483: transaminase activity | 1.94E-02 |
| 66 | GO:0008237: metallopeptidase activity | 1.94E-02 |
| 67 | GO:0016491: oxidoreductase activity | 2.01E-02 |
| 68 | GO:0016413: O-acetyltransferase activity | 2.02E-02 |
| 69 | GO:0016597: amino acid binding | 2.02E-02 |
| 70 | GO:0003729: mRNA binding | 2.41E-02 |
| 71 | GO:0008236: serine-type peptidase activity | 2.45E-02 |
| 72 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 2.45E-02 |
| 73 | GO:0016740: transferase activity | 2.47E-02 |
| 74 | GO:0003746: translation elongation factor activity | 3.01E-02 |
| 75 | GO:0003993: acid phosphatase activity | 3.10E-02 |
| 76 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 3.10E-02 |
| 77 | GO:0004185: serine-type carboxypeptidase activity | 3.60E-02 |
| 78 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.81E-02 |
| 79 | GO:0005198: structural molecule activity | 3.91E-02 |
| 80 | GO:0051287: NAD binding | 4.12E-02 |
| 81 | GO:0003924: GTPase activity | 4.26E-02 |
| 82 | GO:0009055: electron carrier activity | 4.56E-02 |
| 83 | GO:0005524: ATP binding | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0009570: chloroplast stroma | 3.56E-21 |
| 4 | GO:0009507: chloroplast | 2.79E-17 |
| 5 | GO:0009941: chloroplast envelope | 8.16E-12 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 3.52E-07 |
| 7 | GO:0048046: apoplast | 6.11E-07 |
| 8 | GO:0009579: thylakoid | 6.40E-07 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 2.10E-05 |
| 10 | GO:0031977: thylakoid lumen | 4.15E-05 |
| 11 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.64E-04 |
| 12 | GO:0010319: stromule | 1.73E-04 |
| 13 | GO:0045298: tubulin complex | 1.87E-04 |
| 14 | GO:0022626: cytosolic ribosome | 1.98E-04 |
| 15 | GO:0031225: anchored component of membrane | 5.55E-04 |
| 16 | GO:0009346: citrate lyase complex | 8.73E-04 |
| 17 | GO:0005960: glycine cleavage complex | 8.73E-04 |
| 18 | GO:0009534: chloroplast thylakoid | 1.44E-03 |
| 19 | GO:0005618: cell wall | 1.60E-03 |
| 20 | GO:0010168: ER body | 1.80E-03 |
| 21 | GO:0009533: chloroplast stromal thylakoid | 2.55E-03 |
| 22 | GO:0000148: 1,3-beta-D-glucan synthase complex | 3.37E-03 |
| 23 | GO:0009539: photosystem II reaction center | 3.37E-03 |
| 24 | GO:0046658: anchored component of plasma membrane | 3.54E-03 |
| 25 | GO:0005763: mitochondrial small ribosomal subunit | 3.81E-03 |
| 26 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.81E-03 |
| 27 | GO:0009505: plant-type cell wall | 5.32E-03 |
| 28 | GO:0000311: plastid large ribosomal subunit | 5.77E-03 |
| 29 | GO:0030176: integral component of endoplasmic reticulum membrane | 7.41E-03 |
| 30 | GO:0005875: microtubule associated complex | 8.00E-03 |
| 31 | GO:0009706: chloroplast inner membrane | 8.68E-03 |
| 32 | GO:0009654: photosystem II oxygen evolving complex | 9.21E-03 |
| 33 | GO:0042651: thylakoid membrane | 9.21E-03 |
| 34 | GO:0009532: plastid stroma | 9.84E-03 |
| 35 | GO:0005576: extracellular region | 1.06E-02 |
| 36 | GO:0005840: ribosome | 1.43E-02 |
| 37 | GO:0005874: microtubule | 2.80E-02 |
| 38 | GO:0000325: plant-type vacuole | 2.82E-02 |
| 39 | GO:0005829: cytosol | 3.23E-02 |
| 40 | GO:0005856: cytoskeleton | 3.91E-02 |
| 41 | GO:0005743: mitochondrial inner membrane | 3.96E-02 |
| 42 | GO:0005739: mitochondrion | 4.31E-02 |