co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G09450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
2	GO:0043171: peptide catabolic process	0.00E+00
3	GO:0010378: temperature compensation of the circadian clock	0.00E+00
4	GO:0015015: heparan sulfate proteoglycan biosynthetic process, enzymatic modification	0.00E+00
5	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
6	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
7	GO:0009768: photosynthesis, light harvesting in photosystem I	5.11E-20
8	GO:0018298: protein-chromophore linkage	2.39E-14
9	GO:0015979: photosynthesis	1.19E-10
10	GO:0009645: response to low light intensity stimulus	3.81E-09
11	GO:0010218: response to far red light	4.37E-07
12	GO:0009637: response to blue light	6.38E-07
13	GO:0009769: photosynthesis, light harvesting in photosystem II	7.65E-07
14	GO:0009644: response to high light intensity	1.56E-06
15	GO:0009409: response to cold	7.10E-06
16	GO:0000380: alternative mRNA splicing, via spliceosome	2.60E-05
17	GO:0010114: response to red light	3.12E-05
18	GO:0045962: positive regulation of development, heterochronic	3.90E-05
19	GO:0010196: nonphotochemical quenching	7.34E-05
20	GO:0080167: response to karrikin	1.11E-04
21	GO:0009416: response to light stimulus	1.28E-04
22	GO:0015812: gamma-aminobutyric acid transport	1.40E-04
23	GO:0045087: innate immune response	2.97E-04
24	GO:0030259: lipid glycosylation	3.20E-04
25	GO:0010289: homogalacturonan biosynthetic process	3.20E-04
26	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	5.26E-04
27	GO:1902448: positive regulation of shade avoidance	5.26E-04
28	GO:0006598: polyamine catabolic process	5.26E-04
29	GO:0016255: attachment of GPI anchor to protein	5.26E-04
30	GO:0045836: positive regulation of meiotic nuclear division	5.26E-04
31	GO:0010366: negative regulation of ethylene biosynthetic process	5.26E-04
32	GO:0042256: mature ribosome assembly	5.26E-04
33	GO:1901000: regulation of response to salt stress	7.53E-04
34	GO:0044211: CTP salvage	7.53E-04
35	GO:0031936: negative regulation of chromatin silencing	7.53E-04
36	GO:0055070: copper ion homeostasis	7.53E-04
37	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	7.53E-04
38	GO:1903830: magnesium ion transmembrane transport	9.98E-04
39	GO:0009765: photosynthesis, light harvesting	9.98E-04
40	GO:2000306: positive regulation of photomorphogenesis	9.98E-04
41	GO:0044206: UMP salvage	9.98E-04
42	GO:0030104: water homeostasis	9.98E-04
43	GO:0000003: reproduction	9.98E-04
44	GO:0006646: phosphatidylethanolamine biosynthetic process	9.98E-04
45	GO:0015743: malate transport	9.98E-04
46	GO:0006814: sodium ion transport	1.05E-03
47	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.26E-03
48	GO:0045927: positive regulation of growth	1.26E-03
49	GO:0043097: pyrimidine nucleoside salvage	1.26E-03
50	GO:0009058: biosynthetic process	1.32E-03
51	GO:0006206: pyrimidine nucleobase metabolic process	1.55E-03
52	GO:0007035: vacuolar acidification	1.55E-03
53	GO:0009635: response to herbicide	1.55E-03
54	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.81E-03
55	GO:0007623: circadian rhythm	1.85E-03
56	GO:0071333: cellular response to glucose stimulus	1.86E-03
57	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.86E-03
58	GO:0010228: vegetative to reproductive phase transition of meristem	1.96E-03
59	GO:0080111: DNA demethylation	2.18E-03
60	GO:0015693: magnesium ion transport	2.18E-03
61	GO:0006401: RNA catabolic process	2.18E-03
62	GO:0007155: cell adhesion	2.52E-03
63	GO:0009061: anaerobic respiration	2.52E-03
64	GO:0019827: stem cell population maintenance	2.52E-03
65	GO:0010078: maintenance of root meristem identity	2.52E-03
66	GO:0032508: DNA duplex unwinding	2.52E-03
67	GO:2000070: regulation of response to water deprivation	2.52E-03
68	GO:0010119: regulation of stomatal movement	2.56E-03
69	GO:0010043: response to zinc ion	2.56E-03
70	GO:0009735: response to cytokinin	2.80E-03
71	GO:0016051: carbohydrate biosynthetic process	2.81E-03
72	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.88E-03
73	GO:0001510: RNA methylation	2.88E-03
74	GO:0009932: cell tip growth	2.88E-03
75	GO:0048507: meristem development	3.26E-03
76	GO:0090333: regulation of stomatal closure	3.26E-03
77	GO:0042542: response to hydrogen peroxide	3.47E-03
78	GO:0030042: actin filament depolymerization	3.65E-03
79	GO:0008643: carbohydrate transport	3.90E-03
80	GO:0009965: leaf morphogenesis	4.05E-03
81	GO:0010629: negative regulation of gene expression	4.06E-03
82	GO:0009970: cellular response to sulfate starvation	4.06E-03
83	GO:0006995: cellular response to nitrogen starvation	4.06E-03
84	GO:0008285: negative regulation of cell proliferation	4.48E-03
85	GO:0018119: peptidyl-cysteine S-nitrosylation	4.48E-03
86	GO:0006812: cation transport	4.52E-03
87	GO:0006813: potassium ion transport	4.85E-03
88	GO:0016925: protein sumoylation	4.92E-03
89	GO:2000012: regulation of auxin polar transport	5.37E-03
90	GO:0010207: photosystem II assembly	5.84E-03
91	GO:0007015: actin filament organization	5.84E-03
92	GO:0019853: L-ascorbic acid biosynthetic process	6.32E-03
93	GO:0090351: seedling development	6.32E-03
94	GO:0006406: mRNA export from nucleus	7.32E-03
95	GO:0009269: response to desiccation	8.38E-03
96	GO:0051321: meiotic cell cycle	8.38E-03
97	GO:0003333: amino acid transmembrane transport	8.38E-03
98	GO:0048511: rhythmic process	8.38E-03
99	GO:0071215: cellular response to abscisic acid stimulus	9.48E-03
100	GO:0010082: regulation of root meristem growth	9.48E-03
101	GO:0006012: galactose metabolic process	9.48E-03
102	GO:0045492: xylan biosynthetic process	1.01E-02
103	GO:0051028: mRNA transport	1.06E-02
104	GO:0015991: ATP hydrolysis coupled proton transport	1.12E-02
105	GO:0010501: RNA secondary structure unwinding	1.12E-02
106	GO:0045489: pectin biosynthetic process	1.18E-02
107	GO:0008360: regulation of cell shape	1.18E-02
108	GO:0015986: ATP synthesis coupled proton transport	1.25E-02
109	GO:0042752: regulation of circadian rhythm	1.25E-02
110	GO:1901657: glycosyl compound metabolic process	1.51E-02
111	GO:0071805: potassium ion transmembrane transport	1.64E-02
112	GO:0016579: protein deubiquitination	1.71E-02
113	GO:0055085: transmembrane transport	1.94E-02
114	GO:0048573: photoperiodism, flowering	2.00E-02
115	GO:0006950: response to stress	2.00E-02
116	GO:0016049: cell growth	2.08E-02
117	GO:0048481: plant ovule development	2.16E-02
118	GO:0048366: leaf development	2.18E-02
119	GO:0010200: response to chitin	2.38E-02
120	GO:0030001: metal ion transport	2.80E-02
121	GO:0009640: photomorphogenesis	3.06E-02
122	GO:0009926: auxin polar transport	3.06E-02
123	GO:0032259: methylation	3.25E-02
124	GO:0006364: rRNA processing	3.78E-02
125	GO:0009585: red, far-red light phototransduction	3.78E-02
126	GO:0030154: cell differentiation	3.87E-02
127	GO:0009624: response to nematode	4.85E-02
128	GO:0016567: protein ubiquitination	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
2	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
3	GO:0004567: beta-mannosidase activity	0.00E+00
4	GO:0017095: heparan sulfate 6-O-sulfotransferase activity	0.00E+00
5	GO:0080082: esculin beta-glucosidase activity	0.00E+00
6	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
7	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
8	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
9	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
10	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
11	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
12	GO:0008476: protein-tyrosine sulfotransferase activity	0.00E+00
13	GO:0004306: ethanolamine-phosphate cytidylyltransferase activity	0.00E+00
14	GO:0031409: pigment binding	1.34E-20
15	GO:0016168: chlorophyll binding	8.16E-17
16	GO:0080079: cellobiose glucosidase activity	1.40E-04
17	GO:0070006: metalloaminopeptidase activity	1.40E-04
18	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.40E-04
19	GO:0010013: N-1-naphthylphthalamic acid binding	1.40E-04
20	GO:0003923: GPI-anchor transamidase activity	3.20E-04
21	GO:0015180: L-alanine transmembrane transporter activity	3.20E-04
22	GO:0004096: catalase activity	5.26E-04
23	GO:0046592: polyamine oxidase activity	5.26E-04
24	GO:0019948: SUMO activating enzyme activity	5.26E-04
25	GO:0015181: arginine transmembrane transporter activity	7.53E-04
26	GO:0015189: L-lysine transmembrane transporter activity	7.53E-04
27	GO:0005313: L-glutamate transmembrane transporter activity	9.98E-04
28	GO:0005253: anion channel activity	9.98E-04
29	GO:0042277: peptide binding	9.98E-04
30	GO:0004845: uracil phosphoribosyltransferase activity	9.98E-04
31	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.26E-03
32	GO:0003729: mRNA binding	1.29E-03
33	GO:0015562: efflux transmembrane transporter activity	1.55E-03
34	GO:0051117: ATPase binding	1.55E-03
35	GO:0015297: antiporter activity	1.75E-03
36	GO:0004849: uridine kinase activity	1.86E-03
37	GO:0015140: malate transmembrane transporter activity	2.18E-03
38	GO:0005515: protein binding	2.34E-03
39	GO:0004033: aldo-keto reductase (NADP) activity	2.52E-03
40	GO:0015491: cation:cation antiporter activity	2.52E-03
41	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	2.88E-03
42	GO:0003843: 1,3-beta-D-glucan synthase activity	2.88E-03
43	GO:0008168: methyltransferase activity	3.07E-03
44	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.26E-03
45	GO:0005198: structural molecule activity	4.05E-03
46	GO:0015020: glucuronosyltransferase activity	4.06E-03
47	GO:0046961: proton-transporting ATPase activity, rotational mechanism	4.48E-03
48	GO:0004177: aminopeptidase activity	4.48E-03
49	GO:0047372: acylglycerol lipase activity	4.48E-03
50	GO:0000175: 3'-5'-exoribonuclease activity	5.37E-03
51	GO:0005315: inorganic phosphate transmembrane transporter activity	5.37E-03
52	GO:0015095: magnesium ion transmembrane transporter activity	5.37E-03
53	GO:0008131: primary amine oxidase activity	5.84E-03
54	GO:0003712: transcription cofactor activity	6.32E-03
55	GO:0015079: potassium ion transmembrane transporter activity	7.84E-03
56	GO:0008324: cation transmembrane transporter activity	7.84E-03
57	GO:0046872: metal ion binding	7.96E-03
58	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	8.38E-03
59	GO:0004540: ribonuclease activity	8.38E-03
60	GO:0019706: protein-cysteine S-palmitoyltransferase activity	8.38E-03
61	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	8.87E-03
62	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.92E-03
63	GO:0008514: organic anion transmembrane transporter activity	1.01E-02
64	GO:0046873: metal ion transmembrane transporter activity	1.18E-02
65	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.37E-02
66	GO:0008375: acetylglucosaminyltransferase activity	1.93E-02
67	GO:0102483: scopolin beta-glucosidase activity	2.00E-02
68	GO:0004497: monooxygenase activity	2.30E-02
69	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.31E-02
70	GO:0050897: cobalt ion binding	2.39E-02
71	GO:0003697: single-stranded DNA binding	2.55E-02
72	GO:0003993: acid phosphatase activity	2.63E-02
73	GO:0008422: beta-glucosidase activity	2.72E-02
74	GO:0042393: histone binding	2.80E-02
75	GO:0015293: symporter activity	3.32E-02
76	GO:0003690: double-stranded DNA binding	3.87E-02
77	GO:0015171: amino acid transmembrane transporter activity	4.06E-02
78	GO:0031625: ubiquitin protein ligase binding	4.06E-02
79	GO:0022857: transmembrane transporter activity	4.65E-02
80	GO:0016874: ligase activity	4.65E-02
81	GO:0003779: actin binding	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0009783: photosystem II antenna complex	0.00E+00
2	GO:0009522: photosystem I	4.51E-16
3	GO:0030076: light-harvesting complex	4.93E-16
4	GO:0010287: plastoglobule	3.17E-13
5	GO:0009579: thylakoid	5.78E-11
6	GO:0009534: chloroplast thylakoid	6.13E-11
7	GO:0009523: photosystem II	4.62E-08
8	GO:0016021: integral component of membrane	8.86E-08
9	GO:0009535: chloroplast thylakoid membrane	9.93E-08
10	GO:0009941: chloroplast envelope	4.53E-06
11	GO:0009517: PSII associated light-harvesting complex II	1.59E-05
12	GO:0042651: thylakoid membrane	2.41E-05
13	GO:0016020: membrane	8.16E-05
14	GO:0012510: trans-Golgi network transport vesicle membrane	1.40E-04
15	GO:0042765: GPI-anchor transamidase complex	5.26E-04
16	GO:0005777: peroxisome	8.86E-04
17	GO:0016471: vacuolar proton-transporting V-type ATPase complex	9.98E-04
18	GO:0000178: exosome (RNase complex)	1.26E-03
19	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	1.26E-03
20	GO:0009507: chloroplast	1.31E-03
21	GO:0009533: chloroplast stromal thylakoid	2.18E-03
22	GO:0000148: 1,3-beta-D-glucan synthase complex	2.88E-03
23	GO:0031090: organelle membrane	3.26E-03
24	GO:0031307: integral component of mitochondrial outer membrane	4.92E-03
25	GO:0030095: chloroplast photosystem II	5.84E-03
26	GO:0005802: trans-Golgi network	6.57E-03
27	GO:0009654: photosystem II oxygen evolving complex	7.84E-03
28	GO:0005768: endosome	7.98E-03
29	GO:0009543: chloroplast thylakoid lumen	8.64E-03
30	GO:0015629: actin cytoskeleton	9.48E-03
31	GO:0005783: endoplasmic reticulum	9.78E-03
32	GO:0019898: extrinsic component of membrane	1.31E-02
33	GO:0005794: Golgi apparatus	1.33E-02
34	GO:0000139: Golgi membrane	1.48E-02
35	GO:0000932: P-body	1.79E-02
36	GO:0000151: ubiquitin ligase complex	2.16E-02
37	GO:0000325: plant-type vacuole	2.39E-02
38	GO:0000786: nucleosome	2.47E-02
39	GO:0031977: thylakoid lumen	2.88E-02
40	GO:0031966: mitochondrial membrane	3.59E-02
41	GO:0005681: spliceosomal complex	4.26E-02