co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G08640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
2	GO:0010425: DNA methylation on cytosine within a CNG sequence	0.00E+00
3	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
4	GO:0015822: ornithine transport	0.00E+00
5	GO:0009715: chalcone biosynthetic process	0.00E+00
6	GO:0051555: flavonol biosynthetic process	9.62E-09
7	GO:0071555: cell wall organization	1.26E-07
8	GO:0009813: flavonoid biosynthetic process	3.16E-06
9	GO:0010224: response to UV-B	1.64E-05
10	GO:0045489: pectin biosynthetic process	2.23E-05
11	GO:0080167: response to karrikin	2.58E-05
12	GO:0048438: floral whorl development	8.61E-05
13	GO:0000066: mitochondrial ornithine transport	8.61E-05
14	GO:0009629: response to gravity	2.04E-04
15	GO:1903338: regulation of cell wall organization or biogenesis	2.04E-04
16	GO:0019388: galactose catabolic process	2.04E-04
17	GO:0010220: positive regulation of vernalization response	2.04E-04
18	GO:0080183: response to photooxidative stress	2.04E-04
19	GO:1900386: positive regulation of flavonol biosynthetic process	2.04E-04
20	GO:0010069: zygote asymmetric cytokinesis in embryo sac	2.04E-04
21	GO:1901562: response to paraquat	3.42E-04
22	GO:0010253: UDP-rhamnose biosynthetic process	3.42E-04
23	GO:0009411: response to UV	3.83E-04
24	GO:0009590: detection of gravity	4.92E-04
25	GO:0051016: barbed-end actin filament capping	4.92E-04
26	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	6.42E-04
27	GO:0034613: cellular protein localization	6.55E-04
28	GO:0009694: jasmonic acid metabolic process	6.55E-04
29	GO:0051567: histone H3-K9 methylation	6.55E-04
30	GO:0016123: xanthophyll biosynthetic process	8.29E-04
31	GO:0030154: cell differentiation	8.69E-04
32	GO:0009739: response to gibberellin	9.41E-04
33	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.01E-03
34	GO:0010315: auxin efflux	1.01E-03
35	GO:0006559: L-phenylalanine catabolic process	1.01E-03
36	GO:0000060: protein import into nucleus, translocation	1.01E-03
37	GO:0010076: maintenance of floral meristem identity	1.20E-03
38	GO:0017148: negative regulation of translation	1.20E-03
39	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.20E-03
40	GO:0010077: maintenance of inflorescence meristem identity	1.20E-03
41	GO:0045814: negative regulation of gene expression, epigenetic	1.20E-03
42	GO:0010218: response to far red light	1.29E-03
43	GO:0006400: tRNA modification	1.41E-03
44	GO:0045010: actin nucleation	1.63E-03
45	GO:0031540: regulation of anthocyanin biosynthetic process	1.63E-03
46	GO:0005978: glycogen biosynthetic process	1.63E-03
47	GO:0022900: electron transport chain	1.86E-03
48	GO:0015996: chlorophyll catabolic process	1.86E-03
49	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	1.86E-03
50	GO:0048193: Golgi vesicle transport	1.86E-03
51	GO:0009056: catabolic process	2.10E-03
52	GO:0010018: far-red light signaling pathway	2.35E-03
53	GO:0010192: mucilage biosynthetic process	2.61E-03
54	GO:0009909: regulation of flower development	2.80E-03
55	GO:0000272: polysaccharide catabolic process	2.87E-03
56	GO:0048229: gametophyte development	2.87E-03
57	GO:0009698: phenylpropanoid metabolic process	2.87E-03
58	GO:0016925: protein sumoylation	3.15E-03
59	GO:0010582: floral meristem determinacy	3.15E-03
60	GO:0006006: glucose metabolic process	3.43E-03
61	GO:0030036: actin cytoskeleton organization	3.43E-03
62	GO:0048768: root hair cell tip growth	3.73E-03
63	GO:0010020: chloroplast fission	3.73E-03
64	GO:0009225: nucleotide-sugar metabolic process	4.03E-03
65	GO:0009833: plant-type primary cell wall biogenesis	4.34E-03
66	GO:0009695: jasmonic acid biosynthetic process	4.98E-03
67	GO:0031408: oxylipin biosynthetic process	5.32E-03
68	GO:0006306: DNA methylation	5.32E-03
69	GO:0006633: fatty acid biosynthetic process	5.63E-03
70	GO:0040007: growth	6.01E-03
71	GO:0007623: circadian rhythm	6.18E-03
72	GO:0042127: regulation of cell proliferation	6.36E-03
73	GO:0010584: pollen exine formation	6.36E-03
74	GO:0009611: response to wounding	6.39E-03
75	GO:0005975: carbohydrate metabolic process	6.46E-03
76	GO:0016117: carotenoid biosynthetic process	6.73E-03
77	GO:0000271: polysaccharide biosynthetic process	7.10E-03
78	GO:0015991: ATP hydrolysis coupled proton transport	7.10E-03
79	GO:0008360: regulation of cell shape	7.48E-03
80	GO:0006520: cellular amino acid metabolic process	7.48E-03
81	GO:0006342: chromatin silencing	7.48E-03
82	GO:0015986: ATP synthesis coupled proton transport	7.87E-03
83	GO:0019252: starch biosynthetic process	8.26E-03
84	GO:0010583: response to cyclopentenone	9.07E-03
85	GO:1901657: glycosyl compound metabolic process	9.48E-03
86	GO:0016049: cell growth	1.31E-02
87	GO:0030244: cellulose biosynthetic process	1.35E-02
88	GO:0009832: plant-type cell wall biogenesis	1.40E-02
89	GO:0009867: jasmonic acid mediated signaling pathway	1.60E-02
90	GO:0016051: carbohydrate biosynthetic process	1.60E-02
91	GO:0032259: methylation	1.68E-02
92	GO:0006839: mitochondrial transport	1.76E-02
93	GO:0009733: response to auxin	1.76E-02
94	GO:0009753: response to jasmonic acid	1.89E-02
95	GO:0010114: response to red light	1.92E-02
96	GO:0009926: auxin polar transport	1.92E-02
97	GO:0008152: metabolic process	1.94E-02
98	GO:0042546: cell wall biogenesis	1.97E-02
99	GO:0000165: MAPK cascade	2.19E-02
100	GO:0031347: regulation of defense response	2.19E-02
101	GO:0009809: lignin biosynthetic process	2.37E-02
102	GO:0043086: negative regulation of catalytic activity	2.67E-02
103	GO:0016569: covalent chromatin modification	2.92E-02
104	GO:0009416: response to light stimulus	3.12E-02
105	GO:0051726: regulation of cell cycle	3.17E-02
106	GO:0009742: brassinosteroid mediated signaling pathway	3.17E-02
107	GO:0051301: cell division	3.40E-02
108	GO:0045893: positive regulation of transcription, DNA-templated	3.58E-02
109	GO:0009845: seed germination	3.78E-02
110	GO:0009790: embryo development	3.99E-02
111	GO:0006351: transcription, DNA-templated	3.99E-02
112	GO:0007166: cell surface receptor signaling pathway	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
2	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
3	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
4	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
5	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
6	GO:0045430: chalcone isomerase activity	6.94E-06
7	GO:0004837: tyrosine decarboxylase activity	8.61E-05
8	GO:0045486: naringenin 3-dioxygenase activity	8.61E-05
9	GO:0010313: phytochrome binding	8.61E-05
10	GO:0016757: transferase activity, transferring glycosyl groups	1.06E-04
11	GO:0004614: phosphoglucomutase activity	2.04E-04
12	GO:0010291: carotene beta-ring hydroxylase activity	2.04E-04
13	GO:0016868: intramolecular transferase activity, phosphotransferases	2.04E-04
14	GO:0008460: dTDP-glucose 4,6-dehydratase activity	2.04E-04
15	GO:0010280: UDP-L-rhamnose synthase activity	2.04E-04
16	GO:0004312: fatty acid synthase activity	2.04E-04
17	GO:0000064: L-ornithine transmembrane transporter activity	2.04E-04
18	GO:0050377: UDP-glucose 4,6-dehydratase activity	2.04E-04
19	GO:0048531: beta-1,3-galactosyltransferase activity	2.04E-04
20	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	3.42E-04
21	GO:0008253: 5'-nucleotidase activity	3.42E-04
22	GO:0048027: mRNA 5'-UTR binding	4.92E-04
23	GO:0046527: glucosyltransferase activity	6.55E-04
24	GO:0052793: pectin acetylesterase activity	6.55E-04
25	GO:0016759: cellulose synthase activity	7.72E-04
26	GO:0031386: protein tag	8.29E-04
27	GO:0102229: amylopectin maltohydrolase activity	1.01E-03
28	GO:0016161: beta-amylase activity	1.20E-03
29	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	1.20E-03
30	GO:0016621: cinnamoyl-CoA reductase activity	1.41E-03
31	GO:0003843: 1,3-beta-D-glucan synthase activity	1.86E-03
32	GO:0016207: 4-coumarate-CoA ligase activity	2.10E-03
33	GO:0046961: proton-transporting ATPase activity, rotational mechanism	2.87E-03
34	GO:0004860: protein kinase inhibitor activity	2.87E-03
35	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.09E-03
36	GO:0004650: polygalacturonase activity	3.28E-03
37	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.28E-03
38	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.28E-03
39	GO:0031418: L-ascorbic acid binding	4.65E-03
40	GO:0016829: lyase activity	4.85E-03
41	GO:0004176: ATP-dependent peptidase activity	5.32E-03
42	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	5.66E-03
43	GO:0016760: cellulose synthase (UDP-forming) activity	6.01E-03
44	GO:0008017: microtubule binding	6.47E-03
45	GO:0008194: UDP-glycosyltransferase activity	6.91E-03
46	GO:0016853: isomerase activity	7.87E-03
47	GO:0019901: protein kinase binding	8.26E-03
48	GO:0004518: nuclease activity	9.07E-03
49	GO:0046982: protein heterodimerization activity	9.38E-03
50	GO:0051015: actin filament binding	9.48E-03
51	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.03E-02
52	GO:0008237: metallopeptidase activity	1.03E-02
53	GO:0003677: DNA binding	1.20E-02
54	GO:0102483: scopolin beta-glucosidase activity	1.26E-02
55	GO:0052689: carboxylic ester hydrolase activity	1.31E-02
56	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.45E-02
57	GO:0004222: metalloendopeptidase activity	1.45E-02
58	GO:0008422: beta-glucosidase activity	1.70E-02
59	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.75E-02
60	GO:0009055: electron carrier activity	1.89E-02
61	GO:0051537: 2 iron, 2 sulfur cluster binding	2.02E-02
62	GO:0003777: microtubule motor activity	2.55E-02
63	GO:0016887: ATPase activity	2.73E-02
64	GO:0016874: ligase activity	2.92E-02
65	GO:0003779: actin binding	2.98E-02
66	GO:0015035: protein disulfide oxidoreductase activity	3.11E-02
67	GO:0016758: transferase activity, transferring hexosyl groups	3.50E-02
68	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.64E-02
69	GO:0016740: transferase activity	3.80E-02
70	GO:0030170: pyridoxal phosphate binding	3.85E-02
71	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.92E-02
72	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.27E-02
73	GO:0046910: pectinesterase inhibitor activity	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	2.04E-04
2	GO:0042406: extrinsic component of endoplasmic reticulum membrane	3.42E-04
3	GO:0000148: 1,3-beta-D-glucan synthase complex	1.86E-03
4	GO:0005794: Golgi apparatus	2.41E-03
5	GO:0005753: mitochondrial proton-transporting ATP synthase complex	4.03E-03
6	GO:0000139: Golgi membrane	5.44E-03
7	GO:0009705: plant-type vacuole membrane	6.18E-03
8	GO:0000785: chromatin	9.07E-03
9	GO:0010319: stromule	1.03E-02
10	GO:0005886: plasma membrane	1.06E-02
11	GO:0031225: anchored component of membrane	1.09E-02
12	GO:0005743: mitochondrial inner membrane	1.63E-02
13	GO:0043231: intracellular membrane-bounded organelle	1.94E-02
14	GO:0009536: plastid	1.97E-02
15	GO:0010287: plastoglobule	3.44E-02
16	GO:0005802: trans-Golgi network	4.97E-02