co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G08335

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006593: ornithine catabolic process	0.00E+00
2	GO:0032780: negative regulation of ATPase activity	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
5	GO:0046109: uridine biosynthetic process	0.00E+00
6	GO:0010360: negative regulation of anion channel activity	0.00E+00
7	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
8	GO:0006983: ER overload response	0.00E+00
9	GO:0035269: protein O-linked mannosylation	0.00E+00
10	GO:0033587: shikimate biosynthetic process	0.00E+00
11	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
12	GO:0045185: maintenance of protein location	0.00E+00
13	GO:0006182: cGMP biosynthetic process	0.00E+00
14	GO:0006592: ornithine biosynthetic process	0.00E+00
15	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.68E-06
16	GO:0043069: negative regulation of programmed cell death	3.84E-05
17	GO:0001676: long-chain fatty acid metabolic process	4.18E-05
18	GO:1900425: negative regulation of defense response to bacterium	1.68E-04
19	GO:0006014: D-ribose metabolic process	1.68E-04
20	GO:0030433: ubiquitin-dependent ERAD pathway	2.22E-04
21	GO:0007292: female gamete generation	3.44E-04
22	GO:0051245: negative regulation of cellular defense response	3.44E-04
23	GO:0080173: male-female gamete recognition during double fertilization	3.44E-04
24	GO:0010036: response to boron-containing substance	3.44E-04
25	GO:0033306: phytol metabolic process	3.44E-04
26	GO:1902361: mitochondrial pyruvate transmembrane transport	3.44E-04
27	GO:0019544: arginine catabolic process to glutamate	3.44E-04
28	GO:1903648: positive regulation of chlorophyll catabolic process	3.44E-04
29	GO:0035266: meristem growth	3.44E-04
30	GO:0006098: pentose-phosphate shunt	5.47E-04
31	GO:0019521: D-gluconate metabolic process	7.51E-04
32	GO:0080029: cellular response to boron-containing substance levels	7.51E-04
33	GO:0006672: ceramide metabolic process	7.51E-04
34	GO:0051788: response to misfolded protein	7.51E-04
35	GO:0043066: negative regulation of apoptotic process	7.51E-04
36	GO:0006850: mitochondrial pyruvate transport	7.51E-04
37	GO:0015865: purine nucleotide transport	7.51E-04
38	GO:0052542: defense response by callose deposition	7.51E-04
39	GO:0060919: auxin influx	7.51E-04
40	GO:0019441: tryptophan catabolic process to kynurenine	7.51E-04
41	GO:0015914: phospholipid transport	7.51E-04
42	GO:0015824: proline transport	7.51E-04
43	GO:0000266: mitochondrial fission	9.90E-04
44	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.21E-03
45	GO:0060968: regulation of gene silencing	1.21E-03
46	GO:0048281: inflorescence morphogenesis	1.21E-03
47	GO:0051646: mitochondrion localization	1.21E-03
48	GO:0010359: regulation of anion channel activity	1.21E-03
49	GO:0010476: gibberellin mediated signaling pathway	1.21E-03
50	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.21E-03
51	GO:0046902: regulation of mitochondrial membrane permeability	1.75E-03
52	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.75E-03
53	GO:0006612: protein targeting to membrane	1.75E-03
54	GO:0015700: arsenite transport	1.75E-03
55	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.75E-03
56	GO:0046713: borate transport	1.75E-03
57	GO:0006631: fatty acid metabolic process	1.89E-03
58	GO:0016998: cell wall macromolecule catabolic process	2.11E-03
59	GO:0046686: response to cadmium ion	2.29E-03
60	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	2.35E-03
61	GO:0010363: regulation of plant-type hypersensitive response	2.35E-03
62	GO:0007166: cell surface receptor signaling pathway	2.44E-03
63	GO:0030308: negative regulation of cell growth	3.00E-03
64	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	3.00E-03
65	GO:0048232: male gamete generation	3.71E-03
66	GO:0043248: proteasome assembly	3.71E-03
67	GO:0070814: hydrogen sulfide biosynthetic process	3.71E-03
68	GO:1902456: regulation of stomatal opening	3.71E-03
69	GO:0006796: phosphate-containing compound metabolic process	3.71E-03
70	GO:0010315: auxin efflux	3.71E-03
71	GO:0010337: regulation of salicylic acid metabolic process	3.71E-03
72	GO:0009117: nucleotide metabolic process	3.71E-03
73	GO:0006561: proline biosynthetic process	3.71E-03
74	GO:0048827: phyllome development	3.71E-03
75	GO:0016070: RNA metabolic process	3.71E-03
76	GO:0006623: protein targeting to vacuole	3.98E-03
77	GO:0019252: starch biosynthetic process	3.98E-03
78	GO:0009626: plant-type hypersensitive response	4.11E-03
79	GO:0006468: protein phosphorylation	4.15E-03
80	GO:0000302: response to reactive oxygen species	4.26E-03
81	GO:0048444: floral organ morphogenesis	4.47E-03
82	GO:0009630: gravitropism	4.55E-03
83	GO:0006464: cellular protein modification process	5.17E-03
84	GO:0006955: immune response	5.27E-03
85	GO:0009395: phospholipid catabolic process	5.27E-03
86	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	5.27E-03
87	GO:1900057: positive regulation of leaf senescence	5.27E-03
88	GO:1902074: response to salt	5.27E-03
89	GO:0050790: regulation of catalytic activity	5.27E-03
90	GO:0055114: oxidation-reduction process	6.11E-03
91	GO:0009061: anaerobic respiration	6.13E-03
92	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	6.13E-03
93	GO:0009819: drought recovery	6.13E-03
94	GO:1900150: regulation of defense response to fungus	6.13E-03
95	GO:0006506: GPI anchor biosynthetic process	6.13E-03
96	GO:0010078: maintenance of root meristem identity	6.13E-03
97	GO:2000070: regulation of response to water deprivation	6.13E-03
98	GO:0006102: isocitrate metabolic process	6.13E-03
99	GO:0016559: peroxisome fission	6.13E-03
100	GO:0009699: phenylpropanoid biosynthetic process	7.03E-03
101	GO:0009657: plastid organization	7.03E-03
102	GO:0006526: arginine biosynthetic process	7.03E-03
103	GO:0009808: lignin metabolic process	7.03E-03
104	GO:0046685: response to arsenic-containing substance	7.97E-03
105	GO:0009821: alkaloid biosynthetic process	7.97E-03
106	GO:0090305: nucleic acid phosphodiester bond hydrolysis	7.97E-03
107	GO:0019432: triglyceride biosynthetic process	7.97E-03
108	GO:0090333: regulation of stomatal closure	7.97E-03
109	GO:0009056: catabolic process	7.97E-03
110	GO:0008219: cell death	8.05E-03
111	GO:0008202: steroid metabolic process	8.96E-03
112	GO:0006896: Golgi to vacuole transport	1.00E-02
113	GO:0000103: sulfate assimilation	1.00E-02
114	GO:0006032: chitin catabolic process	1.00E-02
115	GO:0048829: root cap development	1.00E-02
116	GO:0010015: root morphogenesis	1.11E-02
117	GO:0000038: very long-chain fatty acid metabolic process	1.11E-02
118	GO:0052544: defense response by callose deposition in cell wall	1.11E-02
119	GO:0000272: polysaccharide catabolic process	1.11E-02
120	GO:0048229: gametophyte development	1.11E-02
121	GO:0006508: proteolysis	1.13E-02
122	GO:0008152: metabolic process	1.13E-02
123	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.22E-02
124	GO:0051707: response to other organism	1.32E-02
125	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.33E-02
126	GO:0018107: peptidyl-threonine phosphorylation	1.33E-02
127	GO:0007034: vacuolar transport	1.45E-02
128	GO:0009933: meristem structural organization	1.45E-02
129	GO:0010540: basipetal auxin transport	1.45E-02
130	GO:0009266: response to temperature stimulus	1.45E-02
131	GO:0010167: response to nitrate	1.58E-02
132	GO:0090351: seedling development	1.58E-02
133	GO:0070588: calcium ion transmembrane transport	1.58E-02
134	GO:0010053: root epidermal cell differentiation	1.58E-02
135	GO:0042538: hyperosmotic salinity response	1.66E-02
136	GO:0000162: tryptophan biosynthetic process	1.70E-02
137	GO:0006813: potassium ion transport	1.79E-02
138	GO:0009863: salicylic acid mediated signaling pathway	1.83E-02
139	GO:0080147: root hair cell development	1.83E-02
140	GO:2000377: regulation of reactive oxygen species metabolic process	1.83E-02
141	GO:0048278: vesicle docking	2.10E-02
142	GO:0031408: oxylipin biosynthetic process	2.10E-02
143	GO:0010431: seed maturation	2.10E-02
144	GO:0048367: shoot system development	2.18E-02
145	GO:0009738: abscisic acid-activated signaling pathway	2.19E-02
146	GO:0007005: mitochondrion organization	2.24E-02
147	GO:0016192: vesicle-mediated transport	2.35E-02
148	GO:0010227: floral organ abscission	2.38E-02
149	GO:0046777: protein autophosphorylation	2.40E-02
150	GO:0035556: intracellular signal transduction	2.50E-02
151	GO:0018105: peptidyl-serine phosphorylation	2.62E-02
152	GO:0016117: carotenoid biosynthetic process	2.68E-02
153	GO:0042631: cellular response to water deprivation	2.83E-02
154	GO:0042391: regulation of membrane potential	2.83E-02
155	GO:0006885: regulation of pH	2.99E-02
156	GO:0010154: fruit development	2.99E-02
157	GO:0048544: recognition of pollen	3.15E-02
158	GO:0061025: membrane fusion	3.15E-02
159	GO:0009651: response to salt stress	3.29E-02
160	GO:0009749: response to glucose	3.31E-02
161	GO:0009851: auxin biosynthetic process	3.31E-02
162	GO:0002229: defense response to oomycetes	3.47E-02
163	GO:0010193: response to ozone	3.47E-02
164	GO:0006635: fatty acid beta-oxidation	3.47E-02
165	GO:0006511: ubiquitin-dependent protein catabolic process	3.61E-02
166	GO:0010583: response to cyclopentenone	3.64E-02
167	GO:1901657: glycosyl compound metabolic process	3.81E-02
168	GO:0006633: fatty acid biosynthetic process	4.00E-02
169	GO:0071805: potassium ion transmembrane transport	4.15E-02
170	GO:0016310: phosphorylation	4.25E-02
171	GO:0010150: leaf senescence	4.38E-02
172	GO:0010029: regulation of seed germination	4.69E-02
173	GO:0009816: defense response to bacterium, incompatible interaction	4.69E-02
174	GO:0009607: response to biotic stimulus	4.69E-02
175	GO:0006906: vesicle fusion	4.87E-02
176	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0080138: borate uptake transmembrane transporter activity	0.00E+00
2	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
3	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
4	GO:0052642: lysophosphatidic acid phosphatase activity	0.00E+00
5	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
6	GO:0008777: acetylornithine deacetylase activity	0.00E+00
7	GO:0042030: ATPase inhibitor activity	0.00E+00
8	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
9	GO:0036402: proteasome-activating ATPase activity	2.68E-06
10	GO:0016301: kinase activity	1.09E-05
11	GO:0005524: ATP binding	4.21E-05
12	GO:0017025: TBP-class protein binding	1.07E-04
13	GO:0005496: steroid binding	1.16E-04
14	GO:0102391: decanoate--CoA ligase activity	2.28E-04
15	GO:0004747: ribokinase activity	2.28E-04
16	GO:0004467: long-chain fatty acid-CoA ligase activity	2.96E-04
17	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.44E-04
18	GO:0033984: indole-3-glycerol-phosphate lyase activity	3.44E-04
19	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.44E-04
20	GO:0010209: vacuolar sorting signal binding	3.44E-04
21	GO:0008865: fructokinase activity	3.72E-04
22	GO:0004582: dolichyl-phosphate beta-D-mannosyltransferase activity	7.51E-04
23	GO:0004061: arylformamidase activity	7.51E-04
24	GO:0004450: isocitrate dehydrogenase (NADP+) activity	7.51E-04
25	GO:0004385: guanylate kinase activity	7.51E-04
26	GO:0010331: gibberellin binding	7.51E-04
27	GO:0015105: arsenite transmembrane transporter activity	7.51E-04
28	GO:0051213: dioxygenase activity	8.08E-04
29	GO:0004674: protein serine/threonine kinase activity	1.03E-03
30	GO:0008430: selenium binding	1.21E-03
31	GO:0000975: regulatory region DNA binding	1.21E-03
32	GO:0050833: pyruvate transmembrane transporter activity	1.21E-03
33	GO:0015193: L-proline transmembrane transporter activity	1.21E-03
34	GO:0004751: ribose-5-phosphate isomerase activity	1.21E-03
35	GO:0004383: guanylate cyclase activity	1.21E-03
36	GO:0004781: sulfate adenylyltransferase (ATP) activity	1.21E-03
37	GO:0016805: dipeptidase activity	1.21E-03
38	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.51E-03
39	GO:0008276: protein methyltransferase activity	1.75E-03
40	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.75E-03
41	GO:0046715: borate transmembrane transporter activity	1.75E-03
42	GO:0000339: RNA cap binding	1.75E-03
43	GO:0004300: enoyl-CoA hydratase activity	1.75E-03
44	GO:0010328: auxin influx transmembrane transporter activity	2.35E-03
45	GO:0009916: alternative oxidase activity	2.35E-03
46	GO:0004834: tryptophan synthase activity	2.35E-03
47	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	3.00E-03
48	GO:0031386: protein tag	3.00E-03
49	GO:0005471: ATP:ADP antiporter activity	3.00E-03
50	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.00E-03
51	GO:0045431: flavonol synthase activity	3.00E-03
52	GO:0008234: cysteine-type peptidase activity	3.48E-03
53	GO:0004526: ribonuclease P activity	3.71E-03
54	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.71E-03
55	GO:0051920: peroxiredoxin activity	4.47E-03
56	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	4.47E-03
57	GO:0004602: glutathione peroxidase activity	4.47E-03
58	GO:0004144: diacylglycerol O-acyltransferase activity	4.47E-03
59	GO:0004656: procollagen-proline 4-dioxygenase activity	4.47E-03
60	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.47E-03
61	GO:0008235: metalloexopeptidase activity	5.27E-03
62	GO:0102425: myricetin 3-O-glucosyltransferase activity	5.27E-03
63	GO:0102360: daphnetin 3-O-glucosyltransferase activity	5.27E-03
64	GO:0008121: ubiquinol-cytochrome-c reductase activity	5.27E-03
65	GO:0016887: ATPase activity	5.39E-03
66	GO:0047893: flavonol 3-O-glucosyltransferase activity	6.13E-03
67	GO:0004033: aldo-keto reductase (NADP) activity	6.13E-03
68	GO:0016209: antioxidant activity	6.13E-03
69	GO:0008142: oxysterol binding	7.03E-03
70	GO:0030247: polysaccharide binding	7.26E-03
71	GO:0071949: FAD binding	7.97E-03
72	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	7.97E-03
73	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	8.96E-03
74	GO:0004743: pyruvate kinase activity	8.96E-03
75	GO:0047617: acyl-CoA hydrolase activity	8.96E-03
76	GO:0030955: potassium ion binding	8.96E-03
77	GO:0004713: protein tyrosine kinase activity	1.00E-02
78	GO:0004568: chitinase activity	1.00E-02
79	GO:0008171: O-methyltransferase activity	1.00E-02
80	GO:0008794: arsenate reductase (glutaredoxin) activity	1.11E-02
81	GO:0004177: aminopeptidase activity	1.11E-02
82	GO:0008559: xenobiotic-transporting ATPase activity	1.11E-02
83	GO:0005388: calcium-transporting ATPase activity	1.33E-02
84	GO:0010329: auxin efflux transmembrane transporter activity	1.33E-02
85	GO:0031624: ubiquitin conjugating enzyme binding	1.45E-02
86	GO:0030553: cGMP binding	1.58E-02
87	GO:0008061: chitin binding	1.58E-02
88	GO:0030552: cAMP binding	1.58E-02
89	GO:0031418: L-ascorbic acid binding	1.83E-02
90	GO:0005216: ion channel activity	1.96E-02
91	GO:0015079: potassium ion transmembrane transporter activity	1.96E-02
92	GO:0035251: UDP-glucosyltransferase activity	2.10E-02
93	GO:0004176: ATP-dependent peptidase activity	2.10E-02
94	GO:0008408: 3'-5' exonuclease activity	2.10E-02
95	GO:0008233: peptidase activity	2.16E-02
96	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.53E-02
97	GO:0003824: catalytic activity	2.70E-02
98	GO:0030551: cyclic nucleotide binding	2.83E-02
99	GO:0005451: monovalent cation:proton antiporter activity	2.83E-02
100	GO:0005249: voltage-gated potassium channel activity	2.83E-02
101	GO:0015299: solute:proton antiporter activity	3.15E-02
102	GO:0019901: protein kinase binding	3.31E-02
103	GO:0004197: cysteine-type endopeptidase activity	3.64E-02
104	GO:0016491: oxidoreductase activity	3.65E-02
105	GO:0015385: sodium:proton antiporter activity	3.81E-02
106	GO:0004842: ubiquitin-protein transferase activity	3.95E-02
107	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.09E-02
108	GO:0008237: metallopeptidase activity	4.15E-02
109	GO:0005516: calmodulin binding	4.18E-02
110	GO:0016597: amino acid binding	4.33E-02
111	GO:0015250: water channel activity	4.51E-02
112	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.87E-02
113	GO:0020037: heme binding	4.89E-02
114	GO:0008194: UDP-glycosyltransferase activity	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0046862: chromoplast membrane	0.00E+00
3	GO:0005886: plasma membrane	2.85E-09
4	GO:0031597: cytosolic proteasome complex	4.63E-06
5	GO:0031595: nuclear proteasome complex	7.41E-06
6	GO:0008540: proteasome regulatory particle, base subcomplex	2.96E-05
7	GO:0005783: endoplasmic reticulum	7.00E-05
8	GO:0016021: integral component of membrane	2.11E-04
9	GO:0000502: proteasome complex	5.07E-04
10	GO:0005777: peroxisome	7.28E-04
11	GO:0033185: dolichol-phosphate-mannose synthase complex	7.51E-04
12	GO:0016328: lateral plasma membrane	1.21E-03
13	GO:0005782: peroxisomal matrix	1.21E-03
14	GO:0030139: endocytic vesicle	1.21E-03
15	GO:0005829: cytosol	1.30E-03
16	GO:0032585: multivesicular body membrane	1.75E-03
17	GO:0000323: lytic vacuole	1.75E-03
18	GO:0005789: endoplasmic reticulum membrane	2.18E-03
19	GO:0005770: late endosome	3.45E-03
20	GO:0016272: prefoldin complex	4.47E-03
21	GO:0005778: peroxisomal membrane	5.49E-03
22	GO:0031305: integral component of mitochondrial inner membrane	6.13E-03
23	GO:0005773: vacuole	7.53E-03
24	GO:0031901: early endosome membrane	7.97E-03
25	GO:0030665: clathrin-coated vesicle membrane	8.96E-03
26	GO:0016020: membrane	9.06E-03
27	GO:0017119: Golgi transport complex	1.00E-02
28	GO:0031902: late endosome membrane	1.22E-02
29	GO:0005750: mitochondrial respiratory chain complex III	1.45E-02
30	GO:0005764: lysosome	1.45E-02
31	GO:0005737: cytoplasm	1.48E-02
32	GO:0005887: integral component of plasma membrane	1.54E-02
33	GO:0005769: early endosome	1.70E-02
34	GO:0070469: respiratory chain	1.96E-02
35	GO:0005741: mitochondrial outer membrane	2.10E-02
36	GO:0032580: Golgi cisterna membrane	3.98E-02
37	GO:0000932: P-body	4.51E-02