co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G07990

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
2	GO:0009718: anthocyanin-containing compound biosynthetic process	1.54E-06
3	GO:0000271: polysaccharide biosynthetic process	1.03E-05
4	GO:0045489: pectin biosynthetic process	1.18E-05
5	GO:1901537: positive regulation of DNA demethylation	6.42E-05
6	GO:0031539: positive regulation of anthocyanin metabolic process	6.42E-05
7	GO:0010540: basipetal auxin transport	1.23E-04
8	GO:0010541: acropetal auxin transport	1.55E-04
9	GO:0071395: cellular response to jasmonic acid stimulus	1.55E-04
10	GO:0010581: regulation of starch biosynthetic process	2.63E-04
11	GO:0046653: tetrahydrofolate metabolic process	3.82E-04
12	GO:0009963: positive regulation of flavonoid biosynthetic process	3.82E-04
13	GO:0010583: response to cyclopentenone	4.71E-04
14	GO:0007264: small GTPase mediated signal transduction	4.71E-04
15	GO:0016131: brassinosteroid metabolic process	6.45E-04
16	GO:0071368: cellular response to cytokinin stimulus	6.45E-04
17	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.66E-04
18	GO:0010411: xyloglucan metabolic process	7.39E-04
19	GO:0042732: D-xylose metabolic process	7.90E-04
20	GO:0046855: inositol phosphate dephosphorylation	7.90E-04
21	GO:0009826: unidimensional cell growth	8.29E-04
22	GO:0016051: carbohydrate biosynthetic process	1.02E-03
23	GO:0051510: regulation of unidimensional cell growth	1.10E-03
24	GO:0080167: response to karrikin	1.13E-03
25	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.26E-03
26	GO:0042546: cell wall biogenesis	1.35E-03
27	GO:0010099: regulation of photomorphogenesis	1.44E-03
28	GO:0009056: catabolic process	1.62E-03
29	GO:0000902: cell morphogenesis	1.62E-03
30	GO:0071555: cell wall organization	1.89E-03
31	GO:0043069: negative regulation of programmed cell death	2.01E-03
32	GO:0019538: protein metabolic process	2.01E-03
33	GO:0046856: phosphatidylinositol dephosphorylation	2.21E-03
34	GO:0000038: very long-chain fatty acid metabolic process	2.21E-03
35	GO:0030036: actin cytoskeleton organization	2.64E-03
36	GO:0018107: peptidyl-threonine phosphorylation	2.64E-03
37	GO:0009969: xyloglucan biosynthetic process	3.09E-03
38	GO:0042753: positive regulation of circadian rhythm	3.33E-03
39	GO:0005992: trehalose biosynthetic process	3.57E-03
40	GO:0019953: sexual reproduction	3.82E-03
41	GO:0040008: regulation of growth	4.01E-03
42	GO:0016998: cell wall macromolecule catabolic process	4.08E-03
43	GO:0010017: red or far-red light signaling pathway	4.34E-03
44	GO:0040007: growth	4.60E-03
45	GO:0000226: microtubule cytoskeleton organization	5.43E-03
46	GO:0009958: positive gravitropism	5.72E-03
47	GO:0009741: response to brassinosteroid	5.72E-03
48	GO:0009791: post-embryonic development	6.31E-03
49	GO:0006635: fatty acid beta-oxidation	6.61E-03
50	GO:0009860: pollen tube growth	6.98E-03
51	GO:0009828: plant-type cell wall loosening	7.55E-03
52	GO:0046777: protein autophosphorylation	8.59E-03
53	GO:0048767: root hair elongation	1.07E-02
54	GO:0010218: response to far red light	1.10E-02
55	GO:0010119: regulation of stomatal movement	1.14E-02
56	GO:0016042: lipid catabolic process	1.15E-02
57	GO:0009637: response to blue light	1.22E-02
58	GO:0006468: protein phosphorylation	1.33E-02
59	GO:0010114: response to red light	1.45E-02
60	GO:0009640: photomorphogenesis	1.45E-02
61	GO:0031347: regulation of defense response	1.66E-02
62	GO:0009664: plant-type cell wall organization	1.71E-02
63	GO:0009846: pollen germination	1.71E-02
64	GO:0009736: cytokinin-activated signaling pathway	1.80E-02
65	GO:0006486: protein glycosylation	1.80E-02
66	GO:0009585: red, far-red light phototransduction	1.80E-02
67	GO:0051603: proteolysis involved in cellular protein catabolic process	1.84E-02
68	GO:0010224: response to UV-B	1.84E-02
69	GO:0009416: response to light stimulus	2.11E-02
70	GO:0009740: gibberellic acid mediated signaling pathway	2.21E-02
71	GO:0035556: intracellular signal transduction	2.23E-02
72	GO:0018105: peptidyl-serine phosphorylation	2.36E-02
73	GO:0009742: brassinosteroid mediated signaling pathway	2.41E-02
74	GO:0042744: hydrogen peroxide catabolic process	2.97E-02
75	GO:0006633: fatty acid biosynthetic process	3.19E-02
76	GO:0006470: protein dephosphorylation	3.75E-02

Rank	GO Term	Adjusted P value
1	GO:0008115: sarcosine oxidase activity	0.00E+00
2	GO:0090411: brassinosteroid binding	0.00E+00
3	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
4	GO:0047890: flavanone 4-reductase activity	0.00E+00
5	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
6	GO:0035252: UDP-xylosyltransferase activity	1.09E-05
7	GO:0080132: fatty acid alpha-hydroxylase activity	6.42E-05
8	GO:0050736: O-malonyltransferase activity	1.55E-04
9	GO:0048531: beta-1,3-galactosyltransferase activity	1.55E-04
10	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.37E-04
11	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	2.63E-04
12	GO:0016758: transferase activity, transferring hexosyl groups	3.22E-04
13	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	3.82E-04
14	GO:0033843: xyloglucan 6-xylosyltransferase activity	3.82E-04
15	GO:0004445: inositol-polyphosphate 5-phosphatase activity	3.82E-04
16	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	7.90E-04
17	GO:0019899: enzyme binding	1.10E-03
18	GO:0052689: carboxylic ester hydrolase activity	1.28E-03
19	GO:0004674: protein serine/threonine kinase activity	1.66E-03
20	GO:0004805: trehalose-phosphatase activity	2.01E-03
21	GO:0008327: methyl-CpG binding	2.21E-03
22	GO:0016757: transferase activity, transferring glycosyl groups	3.17E-03
23	GO:0004672: protein kinase activity	3.39E-03
24	GO:0016740: transferase activity	4.87E-03
25	GO:0050662: coenzyme binding	6.01E-03
26	GO:0019901: protein kinase binding	6.31E-03
27	GO:0016788: hydrolase activity, acting on ester bonds	6.60E-03
28	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.61E-03
29	GO:0005200: structural constituent of cytoskeleton	7.88E-03
30	GO:0005506: iron ion binding	9.08E-03
31	GO:0016798: hydrolase activity, acting on glycosyl bonds	9.57E-03
32	GO:0004806: triglyceride lipase activity	9.57E-03
33	GO:0003924: GTPase activity	1.19E-02
34	GO:0004185: serine-type carboxypeptidase activity	1.45E-02
35	GO:0020037: heme binding	1.65E-02
36	GO:0016301: kinase activity	1.82E-02
37	GO:0003690: double-stranded DNA binding	1.84E-02
38	GO:0031625: ubiquitin protein ligase binding	1.93E-02
39	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.07E-02
40	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.16E-02
41	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.16E-02
42	GO:0015035: protein disulfide oxidoreductase activity	2.36E-02
43	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.76E-02
44	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.97E-02
45	GO:0019825: oxygen binding	3.01E-02
46	GO:0005516: calmodulin binding	3.18E-02
47	GO:0005525: GTP binding	3.48E-02
48	GO:0046982: protein heterodimerization activity	4.58E-02
49	GO:0003677: DNA binding	4.60E-02
50	GO:0004601: peroxidase activity	4.65E-02
51	GO:0003682: chromatin binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.63E-04
2	GO:0010369: chromocenter	9.40E-04
3	GO:0000139: Golgi membrane	2.99E-03
4	GO:0009506: plasmodesma	1.16E-02
5	GO:0000786: nucleosome	1.18E-02
6	GO:0005856: cytoskeleton	1.58E-02
7	GO:0009524: phragmoplast	2.81E-02
8	GO:0005886: plasma membrane	3.23E-02
9	GO:0031225: anchored component of membrane	3.30E-02
10	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.96E-02