co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G07840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009877: nodulation	0.00E+00
2	GO:0043171: peptide catabolic process	0.00E+00
3	GO:0042906: xanthine transport	0.00E+00
4	GO:0030644: cellular chloride ion homeostasis	0.00E+00
5	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
6	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
7	GO:0009892: negative regulation of metabolic process	0.00E+00
8	GO:0071311: cellular response to acetate	0.00E+00
9	GO:0071260: cellular response to mechanical stimulus	0.00E+00
10	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
11	GO:0009768: photosynthesis, light harvesting in photosystem I	8.51E-07
12	GO:0009645: response to low light intensity stimulus	1.27E-06
13	GO:0018298: protein-chromophore linkage	2.03E-05
14	GO:0009416: response to light stimulus	3.87E-05
15	GO:0010114: response to red light	5.38E-05
16	GO:0009644: response to high light intensity	6.23E-05
17	GO:0080173: male-female gamete recognition during double fertilization	1.71E-04
18	GO:0015812: gamma-aminobutyric acid transport	1.71E-04
19	GO:0009970: cellular response to sulfate starvation	2.80E-04
20	GO:0010218: response to far red light	3.58E-04
21	GO:0015857: uracil transport	3.87E-04
22	GO:1902884: positive regulation of response to oxidative stress	3.87E-04
23	GO:0030259: lipid glycosylation	3.87E-04
24	GO:0000256: allantoin catabolic process	3.87E-04
25	GO:0015720: allantoin transport	3.87E-04
26	GO:0006883: cellular sodium ion homeostasis	3.87E-04
27	GO:0009637: response to blue light	4.29E-04
28	GO:0071705: nitrogen compound transport	6.32E-04
29	GO:0010136: ureide catabolic process	6.32E-04
30	GO:0071230: cellular response to amino acid stimulus	6.32E-04
31	GO:1901562: response to paraquat	6.32E-04
32	GO:0090630: activation of GTPase activity	6.32E-04
33	GO:0045836: positive regulation of meiotic nuclear division	6.32E-04
34	GO:0045165: cell fate commitment	6.32E-04
35	GO:1902448: positive regulation of shade avoidance	6.32E-04
36	GO:0006145: purine nucleobase catabolic process	9.04E-04
37	GO:0009800: cinnamic acid biosynthetic process	9.04E-04
38	GO:1901332: negative regulation of lateral root development	9.04E-04
39	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	9.04E-04
40	GO:1901000: regulation of response to salt stress	9.04E-04
41	GO:0009723: response to ethylene	1.04E-03
42	GO:1901002: positive regulation of response to salt stress	1.20E-03
43	GO:0030104: water homeostasis	1.20E-03
44	GO:1903830: magnesium ion transmembrane transport	1.20E-03
45	GO:0009765: photosynthesis, light harvesting	1.20E-03
46	GO:2000306: positive regulation of photomorphogenesis	1.20E-03
47	GO:0045927: positive regulation of growth	1.52E-03
48	GO:0016123: xanthophyll biosynthetic process	1.52E-03
49	GO:0009957: epidermal cell fate specification	1.52E-03
50	GO:0045962: positive regulation of development, heterochronic	1.87E-03
51	GO:0007035: vacuolar acidification	1.87E-03
52	GO:0000741: karyogamy	1.87E-03
53	GO:0002238: response to molecule of fungal origin	1.87E-03
54	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.87E-03
55	GO:0009409: response to cold	1.89E-03
56	GO:0010286: heat acclimation	2.01E-03
57	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.24E-03
58	GO:0009769: photosynthesis, light harvesting in photosystem II	2.64E-03
59	GO:0015693: magnesium ion transport	2.64E-03
60	GO:0032880: regulation of protein localization	2.64E-03
61	GO:0010078: maintenance of root meristem identity	3.06E-03
62	GO:2000070: regulation of response to water deprivation	3.06E-03
63	GO:0009061: anaerobic respiration	3.06E-03
64	GO:0009827: plant-type cell wall modification	3.50E-03
65	GO:0048507: meristem development	3.95E-03
66	GO:0034765: regulation of ion transmembrane transport	3.95E-03
67	GO:0090333: regulation of stomatal closure	3.95E-03
68	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.44E-03
69	GO:0030042: actin filament depolymerization	4.44E-03
70	GO:0010162: seed dormancy process	4.93E-03
71	GO:0006995: cellular response to nitrogen starvation	4.93E-03
72	GO:0055062: phosphate ion homeostasis	4.93E-03
73	GO:0007064: mitotic sister chromatid cohesion	4.93E-03
74	GO:0006535: cysteine biosynthetic process from serine	4.93E-03
75	GO:0009688: abscisic acid biosynthetic process	4.93E-03
76	GO:0008643: carbohydrate transport	5.17E-03
77	GO:0006816: calcium ion transport	5.45E-03
78	GO:0046856: phosphatidylinositol dephosphorylation	5.45E-03
79	GO:0016925: protein sumoylation	5.98E-03
80	GO:0042538: hyperosmotic salinity response	5.99E-03
81	GO:0080167: response to karrikin	6.06E-03
82	GO:0006813: potassium ion transport	6.43E-03
83	GO:0050826: response to freezing	6.54E-03
84	GO:0018107: peptidyl-threonine phosphorylation	6.54E-03
85	GO:0044550: secondary metabolite biosynthetic process	6.75E-03
86	GO:0007015: actin filament organization	7.11E-03
87	GO:0010540: basipetal auxin transport	7.11E-03
88	GO:0015979: photosynthesis	7.18E-03
89	GO:0090351: seedling development	7.69E-03
90	GO:0007031: peroxisome organization	7.69E-03
91	GO:0034976: response to endoplasmic reticulum stress	8.30E-03
92	GO:0019344: cysteine biosynthetic process	8.92E-03
93	GO:0006874: cellular calcium ion homeostasis	9.56E-03
94	GO:0010026: trichome differentiation	9.56E-03
95	GO:0009408: response to heat	9.96E-03
96	GO:0051321: meiotic cell cycle	1.02E-02
97	GO:0003333: amino acid transmembrane transport	1.02E-02
98	GO:0048511: rhythmic process	1.02E-02
99	GO:0010431: seed maturation	1.02E-02
100	GO:0009269: response to desiccation	1.02E-02
101	GO:0071215: cellular response to abscisic acid stimulus	1.16E-02
102	GO:0010227: floral organ abscission	1.16E-02
103	GO:0045492: xylan biosynthetic process	1.23E-02
104	GO:0019722: calcium-mediated signaling	1.23E-02
105	GO:0070417: cellular response to cold	1.30E-02
106	GO:0051028: mRNA transport	1.30E-02
107	GO:0016117: carotenoid biosynthetic process	1.30E-02
108	GO:0034220: ion transmembrane transport	1.37E-02
109	GO:0015991: ATP hydrolysis coupled proton transport	1.37E-02
110	GO:0010197: polar nucleus fusion	1.45E-02
111	GO:0010182: sugar mediated signaling pathway	1.45E-02
112	GO:0015986: ATP synthesis coupled proton transport	1.52E-02
113	GO:0006814: sodium ion transport	1.52E-02
114	GO:0007623: circadian rhythm	1.59E-02
115	GO:0006623: protein targeting to vacuole	1.60E-02
116	GO:0010228: vegetative to reproductive phase transition of meristem	1.66E-02
117	GO:1901657: glycosyl compound metabolic process	1.84E-02
118	GO:0008380: RNA splicing	1.90E-02
119	GO:0010468: regulation of gene expression	1.90E-02
120	GO:0009567: double fertilization forming a zygote and endosperm	1.93E-02
121	GO:0071805: potassium ion transmembrane transport	2.01E-02
122	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.27E-02
123	GO:0015995: chlorophyll biosynthetic process	2.45E-02
124	GO:0048573: photoperiodism, flowering	2.45E-02
125	GO:0009817: defense response to fungus, incompatible interaction	2.64E-02
126	GO:0048481: plant ovule development	2.64E-02
127	GO:0016567: protein ubiquitination	2.68E-02
128	GO:0007568: aging	2.93E-02
129	GO:0010200: response to chitin	3.16E-02
130	GO:0009651: response to salt stress	3.16E-02
131	GO:0030001: metal ion transport	3.43E-02
132	GO:0042542: response to hydrogen peroxide	3.64E-02
133	GO:0009640: photomorphogenesis	3.74E-02
134	GO:0009926: auxin polar transport	3.74E-02
135	GO:0009965: leaf morphogenesis	4.06E-02
136	GO:0000165: MAPK cascade	4.29E-02
137	GO:0009751: response to salicylic acid	4.43E-02
138	GO:0006629: lipid metabolic process	4.49E-02
139	GO:0051603: proteolysis involved in cellular protein catabolic process	4.74E-02
140	GO:0009414: response to water deprivation	4.79E-02
141	GO:0009909: regulation of flower development	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0008685: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	0.00E+00
3	GO:0080082: esculin beta-glucosidase activity	0.00E+00
4	GO:0015276: ligand-gated ion channel activity	0.00E+00
5	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
6	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
7	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
8	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
9	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
10	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
11	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
12	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
13	GO:0031409: pigment binding	5.26E-07
14	GO:0016168: chlorophyll binding	1.32E-05
15	GO:0008066: glutamate receptor activity	1.71E-04
16	GO:0070006: metalloaminopeptidase activity	1.71E-04
17	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.71E-04
18	GO:0005244: voltage-gated ion channel activity	1.71E-04
19	GO:0010013: N-1-naphthylphthalamic acid binding	1.71E-04
20	GO:0080079: cellobiose glucosidase activity	1.71E-04
21	GO:0004177: aminopeptidase activity	3.25E-04
22	GO:0015180: L-alanine transmembrane transporter activity	3.87E-04
23	GO:0005274: allantoin uptake transmembrane transporter activity	3.87E-04
24	GO:0004848: ureidoglycolate hydrolase activity	6.32E-04
25	GO:0004096: catalase activity	6.32E-04
26	GO:0019948: SUMO activating enzyme activity	6.32E-04
27	GO:0015181: arginine transmembrane transporter activity	9.04E-04
28	GO:0009001: serine O-acetyltransferase activity	9.04E-04
29	GO:0015189: L-lysine transmembrane transporter activity	9.04E-04
30	GO:0015210: uracil transmembrane transporter activity	1.20E-03
31	GO:0005313: L-glutamate transmembrane transporter activity	1.20E-03
32	GO:0042277: peptide binding	1.20E-03
33	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.52E-03
34	GO:0002020: protease binding	1.52E-03
35	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.83E-03
36	GO:0051117: ATPase binding	1.87E-03
37	GO:0004525: ribonuclease III activity	3.06E-03
38	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	3.50E-03
39	GO:0005267: potassium channel activity	3.50E-03
40	GO:0071949: FAD binding	3.95E-03
41	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.95E-03
42	GO:0046872: metal ion binding	4.32E-03
43	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	4.93E-03
44	GO:0046961: proton-transporting ATPase activity, rotational mechanism	5.45E-03
45	GO:0047372: acylglycerol lipase activity	5.45E-03
46	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	5.98E-03
47	GO:0004497: monooxygenase activity	6.06E-03
48	GO:0004565: beta-galactosidase activity	6.54E-03
49	GO:0004022: alcohol dehydrogenase (NAD) activity	6.54E-03
50	GO:0005315: inorganic phosphate transmembrane transporter activity	6.54E-03
51	GO:0015095: magnesium ion transmembrane transporter activity	6.54E-03
52	GO:0005262: calcium channel activity	6.54E-03
53	GO:0005217: intracellular ligand-gated ion channel activity	7.69E-03
54	GO:0003712: transcription cofactor activity	7.69E-03
55	GO:0004970: ionotropic glutamate receptor activity	7.69E-03
56	GO:0016874: ligase activity	8.63E-03
57	GO:0015079: potassium ion transmembrane transporter activity	9.56E-03
58	GO:0004707: MAP kinase activity	1.02E-02
59	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.02E-02
60	GO:0003756: protein disulfide isomerase activity	1.23E-02
61	GO:0008514: organic anion transmembrane transporter activity	1.23E-02
62	GO:0046873: metal ion transmembrane transporter activity	1.45E-02
63	GO:0030276: clathrin binding	1.45E-02
64	GO:0015297: antiporter activity	1.52E-02
65	GO:0005351: sugar:proton symporter activity	1.55E-02
66	GO:0008237: metallopeptidase activity	2.01E-02
67	GO:0000166: nucleotide binding	2.06E-02
68	GO:0102483: scopolin beta-glucosidase activity	2.45E-02
69	GO:0003677: DNA binding	2.59E-02
70	GO:0005515: protein binding	2.64E-02
71	GO:0005096: GTPase activator activity	2.73E-02
72	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.83E-02
73	GO:0020037: heme binding	2.84E-02
74	GO:0050897: cobalt ion binding	2.93E-02
75	GO:0019825: oxygen binding	3.20E-02
76	GO:0008422: beta-glucosidase activity	3.33E-02
77	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.65E-02
78	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.94E-02
79	GO:0005198: structural molecule activity	4.06E-02
80	GO:0015293: symporter activity	4.06E-02
81	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.06E-02
82	GO:0005506: iron ion binding	4.84E-02
83	GO:0015171: amino acid transmembrane transporter activity	4.97E-02
84	GO:0031625: ubiquitin protein ligase binding	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0009522: photosystem I	3.88E-06
2	GO:0010287: plastoglobule	2.10E-05
3	GO:0030076: light-harvesting complex	2.26E-05
4	GO:0009523: photosystem II	1.18E-04
5	GO:0012510: trans-Golgi network transport vesicle membrane	1.71E-04
6	GO:0016021: integral component of membrane	3.29E-04
7	GO:0009579: thylakoid	3.60E-04
8	GO:0009941: chloroplast envelope	9.36E-04
9	GO:0009517: PSII associated light-harvesting complex II	1.20E-03
10	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.20E-03
11	GO:0009898: cytoplasmic side of plasma membrane	1.20E-03
12	GO:0005773: vacuole	1.28E-03
13	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	1.52E-03
14	GO:0009535: chloroplast thylakoid membrane	1.56E-03
15	GO:0009534: chloroplast thylakoid	1.59E-03
16	GO:0031090: organelle membrane	3.95E-03
17	GO:0010494: cytoplasmic stress granule	3.95E-03
18	GO:0005884: actin filament	5.45E-03
19	GO:0009507: chloroplast	6.78E-03
20	GO:0005681: spliceosomal complex	7.61E-03
21	GO:0015629: actin cytoskeleton	1.16E-02
22	GO:0030136: clathrin-coated vesicle	1.30E-02
23	GO:0005770: late endosome	1.45E-02
24	GO:0016020: membrane	1.48E-02
25	GO:0005783: endoplasmic reticulum	1.80E-02
26	GO:0005778: peroxisomal membrane	2.01E-02
27	GO:0000932: P-body	2.18E-02
28	GO:0000151: ubiquitin ligase complex	2.64E-02
29	GO:0000325: plant-type vacuole	2.93E-02
30	GO:0031969: chloroplast membrane	3.05E-02
31	GO:0005802: trans-Golgi network	3.71E-02
32	GO:0005768: endosome	4.34E-02
33	GO:0031966: mitochondrial membrane	4.40E-02