co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G07290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0060560: developmental growth involved in morphogenesis	0.00E+00
2	GO:0015015: heparan sulfate proteoglycan biosynthetic process, enzymatic modification	0.00E+00
3	GO:0071311: cellular response to acetate	0.00E+00
4	GO:0071260: cellular response to mechanical stimulus	0.00E+00
5	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
6	GO:0071076: RNA 3' uridylation	5.03E-05
7	GO:1903705: positive regulation of production of siRNA involved in RNA interference	5.03E-05
8	GO:0034976: response to endoplasmic reticulum stress	1.11E-04
9	GO:0009663: plasmodesma organization	2.11E-04
10	GO:0071230: cellular response to amino acid stimulus	2.11E-04
11	GO:0010366: negative regulation of ethylene biosynthetic process	2.11E-04
12	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	2.11E-04
13	GO:0051028: mRNA transport	2.22E-04
14	GO:0007276: gamete generation	3.09E-04
15	GO:0019048: modulation by virus of host morphology or physiology	3.09E-04
16	GO:0055070: copper ion homeostasis	3.09E-04
17	GO:0060964: regulation of gene silencing by miRNA	3.09E-04
18	GO:0010071: root meristem specification	3.09E-04
19	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	3.09E-04
20	GO:0006661: phosphatidylinositol biosynthetic process	4.15E-04
21	GO:1903830: magnesium ion transmembrane transport	4.15E-04
22	GO:0048015: phosphatidylinositol-mediated signaling	5.26E-04
23	GO:0031365: N-terminal protein amino acid modification	5.26E-04
24	GO:0045962: positive regulation of development, heterochronic	6.44E-04
25	GO:0007035: vacuolar acidification	6.44E-04
26	GO:0015866: ADP transport	6.44E-04
27	GO:0033962: cytoplasmic mRNA processing body assembly	7.68E-04
28	GO:0051510: regulation of unidimensional cell growth	8.97E-04
29	GO:0015693: magnesium ion transport	8.97E-04
30	GO:0050790: regulation of catalytic activity	8.97E-04
31	GO:0006955: immune response	8.97E-04
32	GO:0019827: stem cell population maintenance	1.03E-03
33	GO:0010078: maintenance of root meristem identity	1.03E-03
34	GO:0071482: cellular response to light stimulus	1.17E-03
35	GO:0006397: mRNA processing	1.30E-03
36	GO:0016571: histone methylation	1.47E-03
37	GO:0007346: regulation of mitotic cell cycle	1.47E-03
38	GO:0043069: negative regulation of programmed cell death	1.63E-03
39	GO:0048829: root cap development	1.63E-03
40	GO:0010215: cellulose microfibril organization	1.63E-03
41	GO:0006816: calcium ion transport	1.79E-03
42	GO:0008285: negative regulation of cell proliferation	1.79E-03
43	GO:0016024: CDP-diacylglycerol biosynthetic process	1.96E-03
44	GO:0048768: root hair cell tip growth	2.32E-03
45	GO:0080188: RNA-directed DNA methylation	2.50E-03
46	GO:0046854: phosphatidylinositol phosphorylation	2.50E-03
47	GO:0007033: vacuole organization	2.50E-03
48	GO:0040008: regulation of growth	2.93E-03
49	GO:0016575: histone deacetylation	3.08E-03
50	GO:0006874: cellular calcium ion homeostasis	3.08E-03
51	GO:0051302: regulation of cell division	3.08E-03
52	GO:0061077: chaperone-mediated protein folding	3.29E-03
53	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.71E-03
54	GO:0010082: regulation of root meristem growth	3.71E-03
55	GO:0045492: xylan biosynthetic process	3.93E-03
56	GO:0019722: calcium-mediated signaling	3.93E-03
57	GO:0009306: protein secretion	3.93E-03
58	GO:0070417: cellular response to cold	4.15E-03
59	GO:0008284: positive regulation of cell proliferation	4.15E-03
60	GO:0034220: ion transmembrane transport	4.37E-03
61	GO:0010501: RNA secondary structure unwinding	4.37E-03
62	GO:0015991: ATP hydrolysis coupled proton transport	4.37E-03
63	GO:0015986: ATP synthesis coupled proton transport	4.83E-03
64	GO:0009749: response to glucose	5.07E-03
65	GO:0016032: viral process	5.56E-03
66	GO:0006904: vesicle docking involved in exocytosis	6.33E-03
67	GO:0030154: cell differentiation	6.89E-03
68	GO:0045454: cell redox homeostasis	7.00E-03
69	GO:0009627: systemic acquired resistance	7.40E-03
70	GO:0006950: response to stress	7.68E-03
71	GO:0030244: cellulose biosynthetic process	8.24E-03
72	GO:0009834: plant-type secondary cell wall biogenesis	8.82E-03
73	GO:0009631: cold acclimation	9.12E-03
74	GO:0009910: negative regulation of flower development	9.12E-03
75	GO:0045087: innate immune response	9.73E-03
76	GO:0006839: mitochondrial transport	1.07E-02
77	GO:0030001: metal ion transport	1.07E-02
78	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.15E-02
79	GO:0008643: carbohydrate transport	1.23E-02
80	GO:0009965: leaf morphogenesis	1.26E-02
81	GO:0007275: multicellular organism development	1.46E-02
82	GO:0006417: regulation of translation	1.54E-02
83	GO:0009416: response to light stimulus	1.54E-02
84	GO:0051301: cell division	1.68E-02
85	GO:0009742: brassinosteroid mediated signaling pathway	1.92E-02
86	GO:0006457: protein folding	1.99E-02
87	GO:0009058: biosynthetic process	2.24E-02
88	GO:0006470: protein dephosphorylation	2.99E-02
89	GO:0010468: regulation of gene expression	3.08E-02
90	GO:0006979: response to oxidative stress	3.14E-02
91	GO:0009733: response to auxin	3.50E-02
92	GO:0009826: unidimensional cell growth	3.61E-02
93	GO:0009860: pollen tube growth	3.91E-02
94	GO:0007049: cell cycle	4.01E-02
95	GO:0009723: response to ethylene	4.12E-02
96	GO:0048366: leaf development	4.17E-02
97	GO:0009409: response to cold	4.21E-02
98	GO:0016192: vesicle-mediated transport	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0017095: heparan sulfate 6-O-sulfotransferase activity	0.00E+00
2	GO:0015276: ligand-gated ion channel activity	0.00E+00
3	GO:0008476: protein-tyrosine sulfotransferase activity	0.00E+00
4	GO:0008066: glutamate receptor activity	5.03E-05
5	GO:0050265: RNA uridylyltransferase activity	5.03E-05
6	GO:0015228: coenzyme A transmembrane transporter activity	1.23E-04
7	GO:0043424: protein histidine kinase binding	1.39E-04
8	GO:0003756: protein disulfide isomerase activity	2.04E-04
9	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	4.15E-04
10	GO:0003729: mRNA binding	4.23E-04
11	GO:0080122: AMP transmembrane transporter activity	5.26E-04
12	GO:0017137: Rab GTPase binding	5.26E-04
13	GO:0051117: ATPase binding	6.44E-04
14	GO:0015217: ADP transmembrane transporter activity	7.68E-04
15	GO:0008235: metalloexopeptidase activity	8.97E-04
16	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.03E-03
17	GO:0005198: structural molecule activity	1.07E-03
18	GO:0004430: 1-phosphatidylinositol 4-kinase activity	1.17E-03
19	GO:0001104: RNA polymerase II transcription cofactor activity	1.17E-03
20	GO:0015020: glucuronosyltransferase activity	1.63E-03
21	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.79E-03
22	GO:0004177: aminopeptidase activity	1.79E-03
23	GO:0015095: magnesium ion transmembrane transporter activity	2.14E-03
24	GO:0005262: calcium channel activity	2.14E-03
25	GO:0019888: protein phosphatase regulator activity	2.14E-03
26	GO:0005217: intracellular ligand-gated ion channel activity	2.50E-03
27	GO:0004970: ionotropic glutamate receptor activity	2.50E-03
28	GO:0003714: transcription corepressor activity	2.88E-03
29	GO:0016779: nucleotidyltransferase activity	3.50E-03
30	GO:0046873: metal ion transmembrane transporter activity	4.60E-03
31	GO:0016853: isomerase activity	4.83E-03
32	GO:0004004: ATP-dependent RNA helicase activity	7.68E-03
33	GO:0031625: ubiquitin protein ligase binding	1.54E-02
34	GO:0008026: ATP-dependent helicase activity	1.92E-02
35	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.20E-02
36	GO:0008565: protein transporter activity	2.46E-02
37	GO:0016757: transferase activity, transferring glycosyl groups	2.90E-02
38	GO:0004497: monooxygenase activity	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0044599: AP-5 adaptor complex	0.00E+00
2	GO:0012510: trans-Golgi network transport vesicle membrane	5.03E-05
3	GO:0035619: root hair tip	3.09E-04
4	GO:0016471: vacuolar proton-transporting V-type ATPase complex	4.15E-04
5	GO:0030117: membrane coat	4.15E-04
6	GO:0030663: COPI-coated vesicle membrane	4.15E-04
7	GO:0000932: P-body	4.65E-04
8	GO:0030126: COPI vesicle coat	5.26E-04
9	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	5.26E-04
10	GO:0070847: core mediator complex	6.44E-04
11	GO:0005655: nucleolar ribonuclease P complex	7.68E-04
12	GO:0000118: histone deacetylase complex	7.68E-04
13	GO:0005802: trans-Golgi network	8.23E-04
14	GO:0005768: endosome	9.96E-04
15	GO:0005680: anaphase-promoting complex	1.32E-03
16	GO:0010494: cytoplasmic stress granule	1.32E-03
17	GO:0005834: heterotrimeric G-protein complex	1.59E-03
18	GO:0000159: protein phosphatase type 2A complex	1.79E-03
19	GO:0030659: cytoplasmic vesicle membrane	2.32E-03
20	GO:0043234: protein complex	2.69E-03
21	GO:0009532: plastid stroma	3.29E-03
22	GO:0009504: cell plate	5.07E-03
23	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	5.18E-03
24	GO:0016592: mediator complex	5.56E-03
25	GO:0000151: ubiquitin ligase complex	8.24E-03
26	GO:0000139: Golgi membrane	9.08E-03
27	GO:0000325: plant-type vacuole	9.12E-03
28	GO:0015934: large ribosomal subunit	9.12E-03
29	GO:0005819: spindle	1.03E-02
30	GO:0005794: Golgi apparatus	1.10E-02
31	GO:0031902: late endosome membrane	1.10E-02
32	GO:0005654: nucleoplasm	2.12E-02
33	GO:0009543: chloroplast thylakoid lumen	2.16E-02
34	GO:0005783: endoplasmic reticulum	2.19E-02
35	GO:0009705: plant-type vacuole membrane	2.72E-02
36	GO:0016021: integral component of membrane	3.29E-02
37	GO:0009505: plant-type cell wall	3.90E-02
38	GO:0005737: cytoplasm	4.72E-02