co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G06960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042430: indole-containing compound metabolic process	0.00E+00
2	GO:0002376: immune system process	0.00E+00
3	GO:0055091: phospholipid homeostasis	0.00E+00
4	GO:0006793: phosphorus metabolic process	0.00E+00
5	GO:0001881: receptor recycling	0.00E+00
6	GO:0070328: triglyceride homeostasis	0.00E+00
7	GO:0009617: response to bacterium	8.77E-06
8	GO:1900424: regulation of defense response to bacterium	8.78E-05
9	GO:0048508: embryonic meristem development	8.78E-05
10	GO:0080173: male-female gamete recognition during double fertilization	8.78E-05
11	GO:0006631: fatty acid metabolic process	1.59E-04
12	GO:0007034: vacuolar transport	1.91E-04
13	GO:0009945: radial axis specification	2.08E-04
14	GO:0080026: response to indolebutyric acid	2.08E-04
15	GO:1902000: homogentisate catabolic process	2.08E-04
16	GO:0097054: L-glutamate biosynthetic process	2.08E-04
17	GO:0051592: response to calcium ion	2.08E-04
18	GO:0055088: lipid homeostasis	2.08E-04
19	GO:0019521: D-gluconate metabolic process	2.08E-04
20	GO:0019374: galactolipid metabolic process	2.08E-04
21	GO:0010200: response to chitin	2.97E-04
22	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	3.48E-04
23	GO:0034051: negative regulation of plant-type hypersensitive response	3.48E-04
24	GO:1900140: regulation of seedling development	3.48E-04
25	GO:0010351: lithium ion transport	3.48E-04
26	GO:0009072: aromatic amino acid family metabolic process	3.48E-04
27	GO:0008333: endosome to lysosome transport	3.48E-04
28	GO:0009651: response to salt stress	4.89E-04
29	GO:0006537: glutamate biosynthetic process	5.01E-04
30	GO:0080024: indolebutyric acid metabolic process	5.01E-04
31	GO:0006882: cellular zinc ion homeostasis	5.01E-04
32	GO:0001676: long-chain fatty acid metabolic process	5.01E-04
33	GO:0055089: fatty acid homeostasis	5.01E-04
34	GO:0048194: Golgi vesicle budding	5.01E-04
35	GO:0055114: oxidation-reduction process	6.04E-04
36	GO:0006623: protein targeting to vacuole	6.17E-04
37	GO:0019676: ammonia assimilation cycle	6.66E-04
38	GO:0060548: negative regulation of cell death	6.66E-04
39	GO:0045727: positive regulation of translation	6.66E-04
40	GO:0009737: response to abscisic acid	7.43E-04
41	GO:0030163: protein catabolic process	7.47E-04
42	GO:0042742: defense response to bacterium	7.86E-04
43	GO:0009247: glycolipid biosynthetic process	8.44E-04
44	GO:0002238: response to molecule of fungal origin	1.03E-03
45	GO:0009612: response to mechanical stimulus	1.23E-03
46	GO:0009942: longitudinal axis specification	1.23E-03
47	GO:0009554: megasporogenesis	1.23E-03
48	GO:0010555: response to mannitol	1.23E-03
49	GO:2000067: regulation of root morphogenesis	1.23E-03
50	GO:0000911: cytokinesis by cell plate formation	1.23E-03
51	GO:0070370: cellular heat acclimation	1.44E-03
52	GO:0030026: cellular manganese ion homeostasis	1.44E-03
53	GO:0050790: regulation of catalytic activity	1.44E-03
54	GO:0043090: amino acid import	1.44E-03
55	GO:0043068: positive regulation of programmed cell death	1.66E-03
56	GO:0019375: galactolipid biosynthetic process	1.66E-03
57	GO:0010262: somatic embryogenesis	1.89E-03
58	GO:0030968: endoplasmic reticulum unfolded protein response	1.89E-03
59	GO:0022900: electron transport chain	1.89E-03
60	GO:0007186: G-protein coupled receptor signaling pathway	1.89E-03
61	GO:0044550: secondary metabolite biosynthetic process	2.12E-03
62	GO:0051865: protein autoubiquitination	2.14E-03
63	GO:0009051: pentose-phosphate shunt, oxidative branch	2.14E-03
64	GO:0006098: pentose-phosphate shunt	2.14E-03
65	GO:0090332: stomatal closure	2.39E-03
66	GO:0030042: actin filament depolymerization	2.39E-03
67	GO:0055062: phosphate ion homeostasis	2.65E-03
68	GO:0006032: chitin catabolic process	2.65E-03
69	GO:0051603: proteolysis involved in cellular protein catabolic process	2.70E-03
70	GO:0000272: polysaccharide catabolic process	2.93E-03
71	GO:0009750: response to fructose	2.93E-03
72	GO:0006790: sulfur compound metabolic process	3.21E-03
73	GO:0012501: programmed cell death	3.21E-03
74	GO:0006006: glucose metabolic process	3.50E-03
75	GO:0034605: cellular response to heat	3.80E-03
76	GO:0070588: calcium ion transmembrane transport	4.10E-03
77	GO:0046854: phosphatidylinositol phosphorylation	4.10E-03
78	GO:0042343: indole glucosinolate metabolic process	4.10E-03
79	GO:0009833: plant-type primary cell wall biogenesis	4.42E-03
80	GO:0009695: jasmonic acid biosynthetic process	5.07E-03
81	GO:0006874: cellular calcium ion homeostasis	5.07E-03
82	GO:0031408: oxylipin biosynthetic process	5.42E-03
83	GO:0016998: cell wall macromolecule catabolic process	5.42E-03
84	GO:0098542: defense response to other organism	5.42E-03
85	GO:0006508: proteolysis	5.57E-03
86	GO:0006012: galactose metabolic process	6.12E-03
87	GO:0006817: phosphate ion transport	6.48E-03
88	GO:0042147: retrograde transport, endosome to Golgi	6.86E-03
89	GO:0000271: polysaccharide biosynthetic process	7.24E-03
90	GO:0061025: membrane fusion	8.02E-03
91	GO:0006814: sodium ion transport	8.02E-03
92	GO:0009749: response to glucose	8.42E-03
93	GO:0008654: phospholipid biosynthetic process	8.42E-03
94	GO:0010183: pollen tube guidance	8.42E-03
95	GO:0010193: response to ozone	8.83E-03
96	GO:0006468: protein phosphorylation	9.33E-03
97	GO:0006511: ubiquitin-dependent protein catabolic process	9.50E-03
98	GO:0006464: cellular protein modification process	1.01E-02
99	GO:0051607: defense response to virus	1.10E-02
100	GO:0009816: defense response to bacterium, incompatible interaction	1.19E-02
101	GO:0080167: response to karrikin	1.22E-02
102	GO:0016311: dephosphorylation	1.33E-02
103	GO:0030244: cellulose biosynthetic process	1.38E-02
104	GO:0008219: cell death	1.38E-02
105	GO:0048767: root hair elongation	1.43E-02
106	GO:0045454: cell redox homeostasis	1.46E-02
107	GO:0009407: toxin catabolic process	1.48E-02
108	GO:0010043: response to zinc ion	1.53E-02
109	GO:0006865: amino acid transport	1.58E-02
110	GO:0009744: response to sucrose	1.95E-02
111	GO:0051707: response to other organism	1.95E-02
112	GO:0009644: response to high light intensity	2.06E-02
113	GO:0015031: protein transport	2.14E-02
114	GO:0031347: regulation of defense response	2.24E-02
115	GO:0006812: cation transport	2.29E-02
116	GO:0009409: response to cold	2.31E-02
117	GO:0009626: plant-type hypersensitive response	2.84E-02
118	GO:0009738: abscisic acid-activated signaling pathway	3.10E-02
119	GO:0009624: response to nematode	3.10E-02
120	GO:0009742: brassinosteroid mediated signaling pathway	3.23E-02
121	GO:0009611: response to wounding	3.28E-02
122	GO:0000398: mRNA splicing, via spliceosome	3.44E-02
123	GO:0016036: cellular response to phosphate starvation	4.35E-02
124	GO:0010150: leaf senescence	4.58E-02
125	GO:0006952: defense response	4.62E-02
126	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0015930: glutamate synthase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0004321: fatty-acyl-CoA synthase activity	8.78E-05
6	GO:0016041: glutamate synthase (ferredoxin) activity	8.78E-05
7	GO:0016920: pyroglutamyl-peptidase activity	8.78E-05
8	GO:0052739: phosphatidylserine 1-acylhydrolase activity	2.08E-04
9	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	2.08E-04
10	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	2.08E-04
11	GO:0004190: aspartic-type endopeptidase activity	2.16E-04
12	GO:0004298: threonine-type endopeptidase activity	3.29E-04
13	GO:0031683: G-protein beta/gamma-subunit complex binding	3.48E-04
14	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	3.48E-04
15	GO:0001664: G-protein coupled receptor binding	3.48E-04
16	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	6.66E-04
17	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	6.66E-04
18	GO:0015368: calcium:cation antiporter activity	6.66E-04
19	GO:0004345: glucose-6-phosphate dehydrogenase activity	6.66E-04
20	GO:0015369: calcium:proton antiporter activity	6.66E-04
21	GO:0004623: phospholipase A2 activity	8.44E-04
22	GO:0031386: protein tag	8.44E-04
23	GO:0051538: 3 iron, 4 sulfur cluster binding	8.44E-04
24	GO:0008374: O-acyltransferase activity	8.44E-04
25	GO:0004866: endopeptidase inhibitor activity	1.03E-03
26	GO:0003978: UDP-glucose 4-epimerase activity	1.23E-03
27	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.23E-03
28	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.23E-03
29	GO:0102391: decanoate--CoA ligase activity	1.23E-03
30	GO:0004012: phospholipid-translocating ATPase activity	1.23E-03
31	GO:0004467: long-chain fatty acid-CoA ligase activity	1.44E-03
32	GO:0005515: protein binding	1.52E-03
33	GO:0015491: cation:cation antiporter activity	1.66E-03
34	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.66E-03
35	GO:0008233: peptidase activity	1.86E-03
36	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.89E-03
37	GO:0016207: 4-coumarate-CoA ligase activity	2.14E-03
38	GO:0015293: symporter activity	2.18E-03
39	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.63E-03
40	GO:0004568: chitinase activity	2.65E-03
41	GO:0008794: arsenate reductase (glutaredoxin) activity	2.93E-03
42	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.50E-03
43	GO:0005315: inorganic phosphate transmembrane transporter activity	3.50E-03
44	GO:0005262: calcium channel activity	3.50E-03
45	GO:0015114: phosphate ion transmembrane transporter activity	3.50E-03
46	GO:0005388: calcium-transporting ATPase activity	3.50E-03
47	GO:0004674: protein serine/threonine kinase activity	3.86E-03
48	GO:0008061: chitin binding	4.10E-03
49	GO:0004725: protein tyrosine phosphatase activity	4.42E-03
50	GO:0033612: receptor serine/threonine kinase binding	5.42E-03
51	GO:0016760: cellulose synthase (UDP-forming) activity	6.12E-03
52	GO:0022891: substrate-specific transmembrane transporter activity	6.12E-03
53	GO:0004197: cysteine-type endopeptidase activity	9.24E-03
54	GO:0019825: oxygen binding	1.01E-02
55	GO:0016759: cellulose synthase activity	1.01E-02
56	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.05E-02
57	GO:0008237: metallopeptidase activity	1.05E-02
58	GO:0004721: phosphoprotein phosphatase activity	1.28E-02
59	GO:0005524: ATP binding	1.30E-02
60	GO:0004871: signal transducer activity	1.53E-02
61	GO:0005506: iron ion binding	1.55E-02
62	GO:0050661: NADP binding	1.79E-02
63	GO:0003924: GTPase activity	1.81E-02
64	GO:0004364: glutathione transferase activity	1.90E-02
65	GO:0005484: SNAP receptor activity	1.95E-02
66	GO:0016298: lipase activity	2.47E-02
67	GO:0008234: cysteine-type peptidase activity	2.60E-02
68	GO:0015171: amino acid transmembrane transporter activity	2.60E-02
69	GO:0020037: heme binding	2.80E-02
70	GO:0016874: ligase activity	2.97E-02
71	GO:0003779: actin binding	3.04E-02
72	GO:0015035: protein disulfide oxidoreductase activity	3.17E-02
73	GO:0016746: transferase activity, transferring acyl groups	3.17E-02
74	GO:0016740: transferase activity	3.90E-02
75	GO:0015144: carbohydrate transmembrane transporter activity	4.14E-02
76	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.35E-02
77	GO:0005351: sugar:proton symporter activity	4.50E-02
78	GO:0005516: calmodulin binding	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005886: plasma membrane	6.00E-05
3	GO:0000502: proteasome complex	2.69E-04
4	GO:0005777: peroxisome	2.82E-04
5	GO:0005839: proteasome core complex	3.29E-04
6	GO:0030139: endocytic vesicle	3.48E-04
7	GO:0016021: integral component of membrane	7.13E-04
8	GO:0005771: multivesicular body	1.03E-03
9	GO:0030904: retromer complex	1.03E-03
10	GO:0031902: late endosome membrane	1.79E-03
11	GO:0019773: proteasome core complex, alpha-subunit complex	1.89E-03
12	GO:0031090: organelle membrane	2.14E-03
13	GO:0005783: endoplasmic reticulum	2.44E-03
14	GO:0005794: Golgi apparatus	2.59E-03
15	GO:0017119: Golgi transport complex	2.65E-03
16	GO:0008541: proteasome regulatory particle, lid subcomplex	2.93E-03
17	GO:0005764: lysosome	3.80E-03
18	GO:0005887: integral component of plasma membrane	4.58E-03
19	GO:0015629: actin cytoskeleton	6.12E-03
20	GO:0009504: cell plate	8.42E-03
21	GO:0005829: cytosol	1.04E-02
22	GO:0005802: trans-Golgi network	1.17E-02
23	GO:0005768: endosome	1.38E-02
24	GO:0009707: chloroplast outer membrane	1.38E-02
25	GO:0005737: cytoplasm	1.71E-02
26	GO:0090406: pollen tube	1.95E-02
27	GO:0031966: mitochondrial membrane	2.29E-02
28	GO:0005747: mitochondrial respiratory chain complex I	2.78E-02
29	GO:0005834: heterotrimeric G-protein complex	2.84E-02
30	GO:0009706: chloroplast inner membrane	3.10E-02
31	GO:0005623: cell	3.71E-02
32	GO:0005773: vacuole	4.34E-02
33	GO:0009705: plant-type vacuole membrane	4.58E-02
34	GO:0005615: extracellular space	4.95E-02