Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G06640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0001935: endothelial cell proliferation0.00E+00
2GO:0009664: plant-type cell wall organization8.15E-06
3GO:0015801: aromatic amino acid transport7.23E-05
4GO:0016124: xanthophyll catabolic process1.74E-04
5GO:0016121: carotene catabolic process1.74E-04
6GO:0010608: posttranscriptional regulation of gene expression1.74E-04
7GO:1904961: quiescent center organization1.74E-04
8GO:0071367: cellular response to brassinosteroid stimulus2.93E-04
9GO:0009072: aromatic amino acid family metabolic process2.93E-04
10GO:0051782: negative regulation of cell division4.23E-04
11GO:0032147: activation of protein kinase activity4.23E-04
12GO:0060236: regulation of mitotic spindle organization5.65E-04
13GO:1901601: strigolactone biosynthetic process5.65E-04
14GO:0019760: glucosinolate metabolic process6.19E-04
15GO:0042138: meiotic DNA double-strand break formation8.73E-04
16GO:0048579: negative regulation of long-day photoperiodism, flowering8.73E-04
17GO:0080113: regulation of seed growth1.04E-03
18GO:0080060: integument development1.04E-03
19GO:0033386: geranylgeranyl diphosphate biosynthetic process1.40E-03
20GO:0052543: callose deposition in cell wall1.40E-03
21GO:0010208: pollen wall assembly1.59E-03
22GO:0033384: geranyl diphosphate biosynthetic process1.80E-03
23GO:0045337: farnesyl diphosphate biosynthetic process1.80E-03
24GO:0009688: abscisic acid biosynthetic process2.23E-03
25GO:0009725: response to hormone2.94E-03
26GO:0010223: secondary shoot formation3.19E-03
27GO:0006357: regulation of transcription from RNA polymerase II promoter3.20E-03
28GO:0071732: cellular response to nitric oxide3.44E-03
29GO:0019762: glucosinolate catabolic process3.71E-03
30GO:0008299: isoprenoid biosynthetic process4.26E-03
31GO:0003333: amino acid transmembrane transport4.54E-03
32GO:0051260: protein homooligomerization4.54E-03
33GO:0035428: hexose transmembrane transport4.83E-03
34GO:0071369: cellular response to ethylene stimulus5.13E-03
35GO:0010584: pollen exine formation5.43E-03
36GO:0016117: carotenoid biosynthetic process5.74E-03
37GO:0046323: glucose import6.38E-03
38GO:0009851: auxin biosynthetic process7.04E-03
39GO:0071281: cellular response to iron ion8.07E-03
40GO:0010286: heat acclimation8.79E-03
41GO:0009407: toxin catabolic process1.23E-02
42GO:0030154: cell differentiation1.26E-02
43GO:0006865: amino acid transport1.32E-02
44GO:0009926: auxin polar transport1.63E-02
45GO:0008643: carbohydrate transport1.72E-02
46GO:0009636: response to toxic substance1.77E-02
47GO:0009965: leaf morphogenesis1.77E-02
48GO:0031347: regulation of defense response1.86E-02
49GO:0042545: cell wall modification2.53E-02
50GO:0009742: brassinosteroid mediated signaling pathway2.69E-02
51GO:0045490: pectin catabolic process3.81E-02
RankGO TermAdjusted P value
1GO:0018479: benzaldehyde dehydrogenase (NAD+) activity0.00E+00
2GO:0102396: 9-cis-10'-apo-beta-carotenal cleavage oxygenase activity0.00E+00
3GO:0102251: all-trans-beta-apo-10'-carotenal cleavage oxygenase activity0.00E+00
4GO:0005302: L-tyrosine transmembrane transporter activity0.00E+00
5GO:0018488: aryl-aldehyde oxidase activity0.00E+00
6GO:0005199: structural constituent of cell wall2.45E-07
7GO:0015173: aromatic amino acid transmembrane transporter activity1.74E-04
8GO:0004031: aldehyde oxidase activity5.65E-04
9GO:0050302: indole-3-acetaldehyde oxidase activity5.65E-04
10GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen7.14E-04
11GO:0019137: thioglucosidase activity8.73E-04
12GO:0080019: fatty-acyl-CoA reductase (alcohol-forming) activity1.04E-03
13GO:0004311: farnesyltranstransferase activity1.40E-03
14GO:0005337: nucleoside transmembrane transporter activity1.40E-03
15GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.72E-03
16GO:0004337: geranyltranstransferase activity1.80E-03
17GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.97E-03
18GO:0004161: dimethylallyltranstransferase activity2.46E-03
19GO:0051119: sugar transmembrane transporter activity3.44E-03
20GO:0001046: core promoter sequence-specific DNA binding3.98E-03
21GO:0003964: RNA-directed DNA polymerase activity4.54E-03
22GO:0022891: substrate-specific transmembrane transporter activity5.13E-03
23GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.59E-03
24GO:0005355: glucose transmembrane transporter activity6.70E-03
25GO:0008233: peptidase activity9.25E-03
26GO:0102483: scopolin beta-glucosidase activity1.07E-02
27GO:0044212: transcription regulatory region DNA binding1.13E-02
28GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.27E-02
29GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.36E-02
30GO:0008422: beta-glucosidase activity1.45E-02
31GO:0004364: glutathione transferase activity1.58E-02
32GO:0051537: 2 iron, 2 sulfur cluster binding1.72E-02
33GO:0003690: double-stranded DNA binding2.06E-02
34GO:0016298: lipase activity2.06E-02
35GO:0045330: aspartyl esterase activity2.16E-02
36GO:0030599: pectinesterase activity2.47E-02
37GO:0022857: transmembrane transporter activity2.47E-02
38GO:0015144: carbohydrate transmembrane transporter activity3.44E-02
39GO:0005351: sugar:proton symporter activity3.75E-02
RankGO TermAdjusted P value
1GO:0009530: primary cell wall2.93E-04
2GO:0010319: stromule8.79E-03
3GO:0005819: spindle1.45E-02
4GO:0090406: pollen tube1.63E-02
5GO:0005887: integral component of plasma membrane1.89E-02
6GO:0009705: plant-type vacuole membrane3.81E-02
Gene type



Gene DE type