Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G06600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032264: IMP salvage0.00E+00
2GO:0070478: nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay0.00E+00
3GO:2000636: positive regulation of primary miRNA processing0.00E+00
4GO:0048867: stem cell fate determination0.00E+00
5GO:2000630: positive regulation of miRNA metabolic process0.00E+00
6GO:0032012: regulation of ARF protein signal transduction8.19E-08
7GO:0009846: pollen germination8.30E-06
8GO:0031338: regulation of vesicle fusion1.57E-05
9GO:0009168: purine ribonucleoside monophosphate biosynthetic process1.57E-05
10GO:0048209: regulation of vesicle targeting, to, from or within Golgi4.12E-05
11GO:0001736: establishment of planar polarity4.12E-05
12GO:0032509: endosome transport via multivesicular body sorting pathway4.12E-05
13GO:0060149: negative regulation of posttranscriptional gene silencing4.12E-05
14GO:0090630: activation of GTPase activity7.34E-05
15GO:0051601: exocyst localization1.11E-04
16GO:0006886: intracellular protein transport1.46E-04
17GO:0000919: cell plate assembly1.53E-04
18GO:0034052: positive regulation of plant-type hypersensitive response1.98E-04
19GO:0006751: glutathione catabolic process2.47E-04
20GO:0016070: RNA metabolic process2.47E-04
21GO:0009942: longitudinal axis specification2.97E-04
22GO:0000911: cytokinesis by cell plate formation2.97E-04
23GO:0048528: post-embryonic root development3.49E-04
24GO:0007155: cell adhesion4.04E-04
25GO:0006875: cellular metal ion homeostasis4.04E-04
26GO:0010093: specification of floral organ identity4.60E-04
27GO:0009932: cell tip growth4.60E-04
28GO:0009880: embryonic pattern specification4.60E-04
29GO:0060321: acceptance of pollen4.60E-04
30GO:0000398: mRNA splicing, via spliceosome5.10E-04
31GO:0048765: root hair cell differentiation7.00E-04
32GO:0010152: pollen maturation7.65E-04
33GO:0006829: zinc II ion transport8.30E-04
34GO:0010540: basipetal auxin transport8.97E-04
35GO:0080188: RNA-directed DNA methylation9.64E-04
36GO:0009826: unidimensional cell growth1.09E-03
37GO:0010073: meristem maintenance1.18E-03
38GO:0006418: tRNA aminoacylation for protein translation1.18E-03
39GO:0006874: cellular calcium ion homeostasis1.18E-03
40GO:0010087: phloem or xylem histogenesis1.65E-03
41GO:0071805: potassium ion transmembrane transport2.36E-03
42GO:0016579: protein deubiquitination2.45E-03
43GO:0009816: defense response to bacterium, incompatible interaction2.65E-03
44GO:0048481: plant ovule development3.05E-03
45GO:0008219: cell death3.05E-03
46GO:0010311: lateral root formation3.15E-03
47GO:0030001: metal ion transport3.91E-03
48GO:0006887: exocytosis4.02E-03
49GO:0006897: endocytosis4.02E-03
50GO:0042546: cell wall biogenesis4.37E-03
51GO:0000209: protein polyubiquitination4.37E-03
52GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.84E-03
53GO:0006813: potassium ion transport5.21E-03
54GO:0006417: regulation of translation5.59E-03
55GO:0009626: plant-type hypersensitive response6.11E-03
56GO:0009845: seed germination8.21E-03
57GO:0009790: embryo development8.65E-03
58GO:0015031: protein transport9.14E-03
59GO:0016036: cellular response to phosphate starvation9.26E-03
60GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.05E-02
61GO:0006470: protein dephosphorylation1.07E-02
62GO:0009860: pollen tube growth1.39E-02
63GO:0016192: vesicle-mediated transport1.60E-02
64GO:0009793: embryo development ending in seed dormancy1.67E-02
65GO:0006397: mRNA processing2.09E-02
66GO:0009555: pollen development3.06E-02
67GO:0055085: transmembrane transport3.63E-02
68GO:0006511: ubiquitin-dependent protein catabolic process3.81E-02
RankGO TermAdjusted P value
1GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
2GO:0010292: GTP:GDP antiporter activity0.00E+00
3GO:0003876: AMP deaminase activity0.00E+00
4GO:0005086: ARF guanyl-nucleotide exchange factor activity3.96E-07
5GO:0019829: cation-transporting ATPase activity7.34E-05
6GO:0005096: GTPase activator activity1.45E-04
7GO:0017137: Rab GTPase binding1.98E-04
8GO:0005085: guanyl-nucleotide exchange factor activity3.49E-04
9GO:0003724: RNA helicase activity4.60E-04
10GO:0003723: RNA binding5.45E-04
11GO:0005089: Rho guanyl-nucleotide exchange factor activity7.00E-04
12GO:0005388: calcium-transporting ATPase activity8.30E-04
13GO:0015079: potassium ion transmembrane transporter activity1.18E-03
14GO:0043424: protein histidine kinase binding1.18E-03
15GO:0004176: ATP-dependent peptidase activity1.25E-03
16GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.25E-03
17GO:0004812: aminoacyl-tRNA ligase activity1.56E-03
18GO:0003729: mRNA binding1.58E-03
19GO:0046873: metal ion transmembrane transporter activity1.73E-03
20GO:0030276: clathrin binding1.73E-03
21GO:0004843: thiol-dependent ubiquitin-specific protease activity1.99E-03
22GO:0008237: metallopeptidase activity2.36E-03
23GO:0004004: ATP-dependent RNA helicase activity2.84E-03
24GO:0004222: metalloendopeptidase activity3.25E-03
25GO:0000149: SNARE binding3.80E-03
26GO:0005198: structural molecule activity4.60E-03
27GO:0005515: protein binding6.61E-03
28GO:0008026: ATP-dependent helicase activity6.92E-03
29GO:0005524: ATP binding1.12E-02
30GO:0042802: identical protein binding1.15E-02
31GO:0008233: peptidase activity1.52E-02
32GO:0061630: ubiquitin protein ligase activity1.60E-02
33GO:0042803: protein homodimerization activity1.81E-02
34GO:0004722: protein serine/threonine phosphatase activity1.87E-02
35GO:0016887: ATPase activity2.78E-02
36GO:0000166: nucleotide binding3.06E-02
37GO:0005516: calmodulin binding4.09E-02
38GO:0005525: GTP binding4.36E-02
RankGO TermAdjusted P value
1GO:0055087: Ski complex0.00E+00
2GO:0005829: cytosol2.10E-06
3GO:0031307: integral component of mitochondrial outer membrane1.11E-05
4GO:0015030: Cajal body5.76E-04
5GO:0000145: exocyst2.08E-03
6GO:0005856: cytoskeleton4.60E-03
7GO:0016020: membrane4.65E-03
8GO:0031966: mitochondrial membrane4.96E-03
9GO:0005681: spliceosomal complex5.85E-03
10GO:0016607: nuclear speck5.98E-03
11GO:0010008: endosome membrane5.98E-03
12GO:0009506: plasmodesma6.03E-03
13GO:0012505: endomembrane system6.51E-03
14GO:0005654: nucleoplasm7.62E-03
15GO:0009524: phragmoplast8.06E-03
16GO:0043231: intracellular membrane-bounded organelle2.18E-02
17GO:0005887: integral component of plasma membrane2.53E-02
18GO:0005737: cytoplasm3.32E-02
19GO:0005802: trans-Golgi network4.28E-02
20GO:0005886: plasma membrane4.56E-02
21GO:0005622: intracellular4.61E-02
22GO:0005768: endosome4.69E-02
Gene type



Gene DE type