co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G06530

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010380: regulation of chlorophyll biosynthetic process	1.63E-06
2	GO:0071490: cellular response to far red light	6.71E-06
3	GO:0071491: cellular response to red light	1.83E-05
4	GO:0007154: cell communication	1.83E-05
5	GO:0071492: cellular response to UV-A	3.35E-05
6	GO:0006168: adenine salvage	5.17E-05
7	GO:0006572: tyrosine catabolic process	5.17E-05
8	GO:2000114: regulation of establishment of cell polarity	5.17E-05
9	GO:0006166: purine ribonucleoside salvage	5.17E-05
10	GO:0006546: glycine catabolic process	7.23E-05
11	GO:0071483: cellular response to blue light	7.23E-05
12	GO:0071486: cellular response to high light intensity	7.23E-05
13	GO:0019464: glycine decarboxylation via glycine cleavage system	7.23E-05
14	GO:0010117: photoprotection	9.53E-05
15	GO:0044209: AMP salvage	9.53E-05
16	GO:0032876: negative regulation of DNA endoreduplication	9.53E-05
17	GO:0045962: positive regulation of development, heterochronic	1.20E-04
18	GO:0010189: vitamin E biosynthetic process	1.46E-04
19	GO:0048766: root hair initiation	2.03E-04
20	GO:0007389: pattern specification process	2.33E-04
21	GO:0010540: basipetal auxin transport	4.66E-04
22	GO:0034605: cellular response to heat	4.66E-04
23	GO:0010030: positive regulation of seed germination	5.02E-04
24	GO:0009825: multidimensional cell growth	5.02E-04
25	GO:0080167: response to karrikin	5.21E-04
26	GO:0010187: negative regulation of seed germination	5.76E-04
27	GO:0010051: xylem and phloem pattern formation	8.55E-04
28	GO:0016126: sterol biosynthetic process	1.30E-03
29	GO:0009910: negative regulation of flower development	1.70E-03
30	GO:0008643: carbohydrate transport	2.26E-03
31	GO:0009965: leaf morphogenesis	2.32E-03
32	GO:0030154: cell differentiation	2.81E-03
33	GO:0009740: gibberellic acid mediated signaling pathway	3.19E-03
34	GO:0009058: biosynthetic process	4.01E-03
35	GO:0007623: circadian rhythm	4.81E-03
36	GO:0010468: regulation of gene expression	5.44E-03
37	GO:0009658: chloroplast organization	6.50E-03
38	GO:0048366: leaf development	7.28E-03
39	GO:0015979: photosynthesis	8.28E-03
40	GO:0045454: cell redox homeostasis	8.56E-03
41	GO:0032259: methylation	9.62E-03
42	GO:0009734: auxin-activated signaling pathway	1.26E-02
43	GO:0009735: response to cytokinin	1.40E-02
44	GO:0009416: response to light stimulus	1.49E-02
45	GO:0035556: intracellular signal transduction	1.55E-02
46	GO:0045893: positive regulation of transcription, DNA-templated	1.64E-02
47	GO:0055085: transmembrane transport	1.76E-02
48	GO:0006511: ubiquitin-dependent protein catabolic process	1.85E-02
49	GO:0006468: protein phosphorylation	1.99E-02
50	GO:0009414: response to water deprivation	2.42E-02
51	GO:0071555: cell wall organization	2.46E-02
52	GO:0009409: response to cold	3.05E-02
53	GO:0005975: carbohydrate metabolic process	3.31E-02

Rank	GO Term	Adjusted P value
1	GO:0030797: 24-methylenesterol C-methyltransferase activity	6.71E-06
2	GO:1901981: phosphatidylinositol phosphate binding	1.83E-05
3	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	3.35E-05
4	GO:0003999: adenine phosphoribosyltransferase activity	5.17E-05
5	GO:0004375: glycine dehydrogenase (decarboxylating) activity	5.17E-05
6	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.66E-04
7	GO:0051119: sugar transmembrane transporter activity	5.02E-04
8	GO:0022891: substrate-specific transmembrane transporter activity	7.31E-04
9	GO:0001085: RNA polymerase II transcription factor binding	8.97E-04
10	GO:0008483: transaminase activity	1.20E-03
11	GO:0016168: chlorophyll binding	1.35E-03
12	GO:0030247: polysaccharide binding	1.45E-03
13	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.50E-03
14	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.70E-03
15	GO:0031625: ubiquitin protein ligase binding	2.80E-03
16	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.99E-03
17	GO:0015035: protein disulfide oxidoreductase activity	3.38E-03
18	GO:0004672: protein kinase activity	3.77E-03
19	GO:0030170: pyridoxal phosphate binding	4.15E-03
20	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.22E-03
21	GO:0003682: chromatin binding	6.76E-03
22	GO:0061630: ubiquitin protein ligase activity	7.82E-03
23	GO:0009055: electron carrier activity	1.04E-02
24	GO:0016740: transferase activity	1.71E-02
25	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.81E-02
26	GO:0005524: ATP binding	1.92E-02
27	GO:0044212: transcription regulatory region DNA binding	2.46E-02
28	GO:0016491: oxidoreductase activity	2.99E-02
29	GO:0004842: ubiquitin-protein transferase activity	3.10E-02

Rank	GO Term	Adjusted P value
1	GO:0009925: basal plasma membrane	1.83E-05
2	GO:0005960: glycine cleavage complex	5.17E-05
3	GO:0048471: perinuclear region of cytoplasm	3.61E-04
4	GO:0009522: photosystem I	9.39E-04
5	GO:0009523: photosystem II	9.82E-04
6	GO:0005667: transcription factor complex	1.40E-03
7	GO:0046658: anchored component of plasma membrane	5.84E-03
8	GO:0005887: integral component of plasma membrane	1.23E-02
9	GO:0005783: endoplasmic reticulum	1.80E-02
10	GO:0031225: anchored component of membrane	2.04E-02
11	GO:0009505: plant-type cell wall	2.89E-02
12	GO:0009535: chloroplast thylakoid membrane	4.37E-02
13	GO:0005794: Golgi apparatus	4.61E-02