GO Enrichment Analysis of Co-expressed Genes with
AT5G05890
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 4.19E-08 |
| 4 | GO:0000481: maturation of 5S rRNA | 1.67E-05 |
| 5 | GO:0006106: fumarate metabolic process | 1.67E-05 |
| 6 | GO:0034337: RNA folding | 1.67E-05 |
| 7 | GO:0080005: photosystem stoichiometry adjustment | 4.35E-05 |
| 8 | GO:0016050: vesicle organization | 7.77E-05 |
| 9 | GO:0010027: thylakoid membrane organization | 1.11E-04 |
| 10 | GO:0009800: cinnamic acid biosynthetic process | 1.17E-04 |
| 11 | GO:1901332: negative regulation of lateral root development | 1.17E-04 |
| 12 | GO:0010109: regulation of photosynthesis | 1.61E-04 |
| 13 | GO:0045727: positive regulation of translation | 1.61E-04 |
| 14 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.59E-04 |
| 15 | GO:0006559: L-phenylalanine catabolic process | 2.59E-04 |
| 16 | GO:0032508: DNA duplex unwinding | 4.23E-04 |
| 17 | GO:0032544: plastid translation | 4.82E-04 |
| 18 | GO:0071482: cellular response to light stimulus | 4.82E-04 |
| 19 | GO:0010628: positive regulation of gene expression | 8.70E-04 |
| 20 | GO:0006108: malate metabolic process | 8.70E-04 |
| 21 | GO:0008299: isoprenoid biosynthetic process | 1.23E-03 |
| 22 | GO:0035428: hexose transmembrane transport | 1.39E-03 |
| 23 | GO:0046323: glucose import | 1.82E-03 |
| 24 | GO:0042128: nitrate assimilation | 2.88E-03 |
| 25 | GO:0010311: lateral root formation | 3.31E-03 |
| 26 | GO:0009631: cold acclimation | 3.53E-03 |
| 27 | GO:0006099: tricarboxylic acid cycle | 3.87E-03 |
| 28 | GO:0006364: rRNA processing | 5.48E-03 |
| 29 | GO:0009409: response to cold | 1.05E-02 |
| 30 | GO:0010468: regulation of gene expression | 1.16E-02 |
| 31 | GO:0005975: carbohydrate metabolic process | 1.18E-02 |
| 32 | GO:0046777: protein autophosphorylation | 1.70E-02 |
| 33 | GO:0045892: negative regulation of transcription, DNA-templated | 1.86E-02 |
| 34 | GO:0032259: methylation | 2.07E-02 |
| 35 | GO:0008152: metabolic process | 2.29E-02 |
| 36 | GO:0009734: auxin-activated signaling pathway | 2.73E-02 |
| 37 | GO:0009735: response to cytokinin | 3.02E-02 |
| 38 | GO:0009611: response to wounding | 3.27E-02 |
| 39 | GO:0045893: positive regulation of transcription, DNA-templated | 3.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 4 | GO:0004333: fumarate hydratase activity | 1.67E-05 |
| 5 | GO:0070402: NADPH binding | 7.77E-05 |
| 6 | GO:0045548: phenylalanine ammonia-lyase activity | 7.77E-05 |
| 7 | GO:0042578: phosphoric ester hydrolase activity | 2.59E-04 |
| 8 | GO:0008266: poly(U) RNA binding | 9.39E-04 |
| 9 | GO:0005528: FK506 binding | 1.16E-03 |
| 10 | GO:0003824: catalytic activity | 1.18E-03 |
| 11 | GO:0004176: ATP-dependent peptidase activity | 1.31E-03 |
| 12 | GO:0005355: glucose transmembrane transporter activity | 1.91E-03 |
| 13 | GO:0050662: coenzyme binding | 1.91E-03 |
| 14 | GO:0016853: isomerase activity | 1.91E-03 |
| 15 | GO:0008483: transaminase activity | 2.48E-03 |
| 16 | GO:0004721: phosphoprotein phosphatase activity | 2.99E-03 |
| 17 | GO:0030145: manganese ion binding | 3.53E-03 |
| 18 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.96E-03 |
| 19 | GO:0019843: rRNA binding | 8.17E-03 |
| 20 | GO:0015144: carbohydrate transmembrane transporter activity | 9.26E-03 |
| 21 | GO:0005351: sugar:proton symporter activity | 1.01E-02 |
| 22 | GO:0003729: mRNA binding | 1.15E-02 |
| 23 | GO:0008168: methyltransferase activity | 1.36E-02 |
| 24 | GO:0008233: peptidase activity | 1.60E-02 |
| 25 | GO:0030246: carbohydrate binding | 3.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.08E-18 |
| 2 | GO:0009570: chloroplast stroma | 1.17E-09 |
| 3 | GO:0009534: chloroplast thylakoid | 6.65E-08 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.78E-07 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.52E-06 |
| 6 | GO:0045239: tricarboxylic acid cycle enzyme complex | 1.67E-05 |
| 7 | GO:0009579: thylakoid | 5.52E-04 |
| 8 | GO:0010287: plastoglobule | 5.62E-04 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 5.92E-04 |
| 10 | GO:0032040: small-subunit processome | 8.01E-04 |
| 11 | GO:0009508: plastid chromosome | 8.70E-04 |
| 12 | GO:0009941: chloroplast envelope | 1.41E-03 |
| 13 | GO:0009295: nucleoid | 2.48E-03 |
| 14 | GO:0009706: chloroplast inner membrane | 6.99E-03 |
| 15 | GO:0031969: chloroplast membrane | 1.62E-02 |