co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G05320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010398: xylogalacturonan metabolic process	0.00E+00
2	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
3	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
4	GO:0006105: succinate metabolic process	0.00E+00
5	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
6	GO:0019484: beta-alanine catabolic process	0.00E+00
7	GO:0006983: ER overload response	0.00E+00
8	GO:0033587: shikimate biosynthetic process	0.00E+00
9	GO:1900057: positive regulation of leaf senescence	6.86E-05
10	GO:0009808: lignin metabolic process	1.12E-04
11	GO:1903648: positive regulation of chlorophyll catabolic process	1.33E-04
12	GO:0035266: meristem growth	1.33E-04
13	GO:0009450: gamma-aminobutyric acid catabolic process	1.33E-04
14	GO:0007292: female gamete generation	1.33E-04
15	GO:0010941: regulation of cell death	1.33E-04
16	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.33E-04
17	GO:0010184: cytokinin transport	1.33E-04
18	GO:0071366: cellular response to indolebutyric acid stimulus	1.33E-04
19	GO:0009865: pollen tube adhesion	1.33E-04
20	GO:0006540: glutamate decarboxylation to succinate	1.33E-04
21	GO:0008202: steroid metabolic process	1.65E-04
22	GO:0043069: negative regulation of programmed cell death	1.96E-04
23	GO:0019441: tryptophan catabolic process to kynurenine	3.07E-04
24	GO:0010033: response to organic substance	3.07E-04
25	GO:0051788: response to misfolded protein	3.07E-04
26	GO:0052542: defense response by callose deposition	3.07E-04
27	GO:0043066: negative regulation of apoptotic process	3.07E-04
28	GO:0015865: purine nucleotide transport	3.07E-04
29	GO:0030187: melatonin biosynthetic process	3.07E-04
30	GO:2000693: positive regulation of seed maturation	3.07E-04
31	GO:0046686: response to cadmium ion	3.18E-04
32	GO:0060968: regulation of gene silencing	5.06E-04
33	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	5.06E-04
34	GO:0042344: indole glucosinolate catabolic process	5.06E-04
35	GO:0006954: inflammatory response	5.06E-04
36	GO:0019438: aromatic compound biosynthetic process	7.24E-04
37	GO:0006624: vacuolar protein processing	7.24E-04
38	GO:0048194: Golgi vesicle budding	7.24E-04
39	GO:0006020: inositol metabolic process	7.24E-04
40	GO:0046902: regulation of mitochondrial membrane permeability	7.24E-04
41	GO:0072334: UDP-galactose transmembrane transport	7.24E-04
42	GO:0009399: nitrogen fixation	7.24E-04
43	GO:0042631: cellular response to water deprivation	8.59E-04
44	GO:0006542: glutamine biosynthetic process	9.59E-04
45	GO:0006536: glutamate metabolic process	9.59E-04
46	GO:0030308: negative regulation of cell growth	1.21E-03
47	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	1.21E-03
48	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.49E-03
49	GO:0010942: positive regulation of cell death	1.49E-03
50	GO:0015691: cadmium ion transport	1.49E-03
51	GO:0048827: phyllome development	1.49E-03
52	GO:0016070: RNA metabolic process	1.49E-03
53	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.49E-03
54	GO:0048232: male gamete generation	1.49E-03
55	GO:0043248: proteasome assembly	1.49E-03
56	GO:1900425: negative regulation of defense response to bacterium	1.49E-03
57	GO:0010337: regulation of salicylic acid metabolic process	1.49E-03
58	GO:0010150: leaf senescence	1.71E-03
59	GO:0009082: branched-chain amino acid biosynthetic process	1.78E-03
60	GO:0006694: steroid biosynthetic process	1.78E-03
61	GO:0009099: valine biosynthetic process	1.78E-03
62	GO:0008219: cell death	2.09E-03
63	GO:0006955: immune response	2.09E-03
64	GO:0071669: plant-type cell wall organization or biogenesis	2.09E-03
65	GO:0070370: cellular heat acclimation	2.09E-03
66	GO:0016559: peroxisome fission	2.42E-03
67	GO:1900150: regulation of defense response to fungus	2.42E-03
68	GO:0010078: maintenance of root meristem identity	2.42E-03
69	GO:0045087: innate immune response	2.64E-03
70	GO:0009097: isoleucine biosynthetic process	2.77E-03
71	GO:0007338: single fertilization	3.13E-03
72	GO:0006098: pentose-phosphate shunt	3.13E-03
73	GO:0042542: response to hydrogen peroxide	3.26E-03
74	GO:0009098: leucine biosynthetic process	3.50E-03
75	GO:0048829: root cap development	3.89E-03
76	GO:0051555: flavonol biosynthetic process	3.89E-03
77	GO:0006535: cysteine biosynthetic process from serine	3.89E-03
78	GO:0006378: mRNA polyadenylation	4.30E-03
79	GO:0010015: root morphogenesis	4.30E-03
80	GO:0000038: very long-chain fatty acid metabolic process	4.30E-03
81	GO:0052544: defense response by callose deposition in cell wall	4.30E-03
82	GO:0009809: lignin biosynthetic process	4.56E-03
83	GO:0006813: potassium ion transport	4.56E-03
84	GO:0071365: cellular response to auxin stimulus	4.72E-03
85	GO:0000266: mitochondrial fission	4.72E-03
86	GO:0006807: nitrogen compound metabolic process	5.15E-03
87	GO:0048367: shoot system development	5.56E-03
88	GO:0034605: cellular response to heat	5.60E-03
89	GO:0006541: glutamine metabolic process	5.60E-03
90	GO:0009933: meristem structural organization	5.60E-03
91	GO:0009626: plant-type hypersensitive response	5.74E-03
92	GO:0090351: seedling development	6.06E-03
93	GO:0007031: peroxisome organization	6.06E-03
94	GO:0010167: response to nitrate	6.06E-03
95	GO:0005985: sucrose metabolic process	6.06E-03
96	GO:0006863: purine nucleobase transport	6.53E-03
97	GO:0000162: tryptophan biosynthetic process	6.53E-03
98	GO:0048364: root development	6.76E-03
99	GO:0019344: cysteine biosynthetic process	7.01E-03
100	GO:0016998: cell wall macromolecule catabolic process	8.02E-03
101	GO:0031408: oxylipin biosynthetic process	8.02E-03
102	GO:0031348: negative regulation of defense response	8.55E-03
103	GO:0071456: cellular response to hypoxia	8.55E-03
104	GO:0035428: hexose transmembrane transport	8.55E-03
105	GO:0030433: ubiquitin-dependent ERAD pathway	8.55E-03
106	GO:0071215: cellular response to abscisic acid stimulus	9.08E-03
107	GO:0015991: ATP hydrolysis coupled proton transport	1.08E-02
108	GO:0046323: glucose import	1.13E-02
109	GO:0045489: pectin biosynthetic process	1.13E-02
110	GO:0010154: fruit development	1.13E-02
111	GO:0006885: regulation of pH	1.13E-02
112	GO:0006520: cellular amino acid metabolic process	1.13E-02
113	GO:0009646: response to absence of light	1.19E-02
114	GO:0048544: recognition of pollen	1.19E-02
115	GO:0010183: pollen tube guidance	1.25E-02
116	GO:0009749: response to glucose	1.25E-02
117	GO:0009738: abscisic acid-activated signaling pathway	1.27E-02
118	GO:0002229: defense response to oomycetes	1.32E-02
119	GO:0009611: response to wounding	1.37E-02
120	GO:1901657: glycosyl compound metabolic process	1.44E-02
121	GO:0009567: double fertilization forming a zygote and endosperm	1.51E-02
122	GO:0071805: potassium ion transmembrane transport	1.57E-02
123	GO:0051607: defense response to virus	1.64E-02
124	GO:0009826: unidimensional cell growth	1.68E-02
125	GO:0016126: sterol biosynthetic process	1.71E-02
126	GO:0001666: response to hypoxia	1.71E-02
127	GO:0009627: systemic acquired resistance	1.85E-02
128	GO:0042128: nitrate assimilation	1.85E-02
129	GO:0006950: response to stress	1.92E-02
130	GO:0048573: photoperiodism, flowering	1.92E-02
131	GO:0009817: defense response to fungus, incompatible interaction	2.06E-02
132	GO:0010311: lateral root formation	2.14E-02
133	GO:0006499: N-terminal protein myristoylation	2.21E-02
134	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.24E-02
135	GO:0010200: response to chitin	2.24E-02
136	GO:0016192: vesicle-mediated transport	2.27E-02
137	GO:0010043: response to zinc ion	2.29E-02
138	GO:0007568: aging	2.29E-02
139	GO:0009631: cold acclimation	2.29E-02
140	GO:0044550: secondary metabolite biosynthetic process	2.35E-02
141	GO:0016051: carbohydrate biosynthetic process	2.44E-02
142	GO:0006839: mitochondrial transport	2.68E-02
143	GO:0006468: protein phosphorylation	2.80E-02
144	GO:0006869: lipid transport	2.84E-02
145	GO:0009744: response to sucrose	2.92E-02
146	GO:0051707: response to other organism	2.92E-02
147	GO:0032259: methylation	3.06E-02
148	GO:0009636: response to toxic substance	3.18E-02
149	GO:0009965: leaf morphogenesis	3.18E-02
150	GO:0006855: drug transmembrane transport	3.26E-02
151	GO:0006979: response to oxidative stress	3.26E-02
152	GO:0009753: response to jasmonic acid	3.42E-02
153	GO:0042538: hyperosmotic salinity response	3.44E-02
154	GO:0006812: cation transport	3.44E-02
155	GO:0051603: proteolysis involved in cellular protein catabolic process	3.71E-02
156	GO:0055114: oxidation-reduction process	4.08E-02
157	GO:0009620: response to fungus	4.36E-02
158	GO:0009742: brassinosteroid mediated signaling pathway	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
4	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
5	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
6	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
7	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
8	GO:0008142: oxysterol binding	1.12E-04
9	GO:0017096: acetylserotonin O-methyltransferase activity	1.33E-04
10	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.33E-04
11	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.33E-04
12	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.33E-04
13	GO:0003867: 4-aminobutyrate transaminase activity	1.33E-04
14	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.33E-04
15	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	3.07E-04
16	GO:0004566: beta-glucuronidase activity	3.07E-04
17	GO:0032934: sterol binding	3.07E-04
18	GO:0004352: glutamate dehydrogenase (NAD+) activity	3.07E-04
19	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	3.07E-04
20	GO:0004061: arylformamidase activity	3.07E-04
21	GO:0047209: coniferyl-alcohol glucosyltransferase activity	3.07E-04
22	GO:0016595: glutamate binding	5.06E-04
23	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	5.06E-04
24	GO:0000975: regulatory region DNA binding	5.06E-04
25	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.06E-04
26	GO:0000339: RNA cap binding	7.24E-04
27	GO:0052654: L-leucine transaminase activity	7.24E-04
28	GO:0052655: L-valine transaminase activity	7.24E-04
29	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	7.24E-04
30	GO:0015086: cadmium ion transmembrane transporter activity	7.24E-04
31	GO:0052656: L-isoleucine transaminase activity	7.24E-04
32	GO:0004834: tryptophan synthase activity	9.59E-04
33	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	9.59E-04
34	GO:0004084: branched-chain-amino-acid transaminase activity	9.59E-04
35	GO:0005471: ATP:ADP antiporter activity	1.21E-03
36	GO:0004356: glutamate-ammonia ligase activity	1.21E-03
37	GO:0005459: UDP-galactose transmembrane transporter activity	1.21E-03
38	GO:0005496: steroid binding	1.21E-03
39	GO:0035252: UDP-xylosyltransferase activity	1.49E-03
40	GO:0036402: proteasome-activating ATPase activity	1.49E-03
41	GO:0004124: cysteine synthase activity	1.78E-03
42	GO:0004012: phospholipid-translocating ATPase activity	1.78E-03
43	GO:0004602: glutathione peroxidase activity	1.78E-03
44	GO:0004620: phospholipase activity	2.09E-03
45	GO:0050897: cobalt ion binding	2.41E-03
46	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.13E-03
47	GO:0071949: FAD binding	3.13E-03
48	GO:0047617: acyl-CoA hydrolase activity	3.50E-03
49	GO:0008171: O-methyltransferase activity	3.89E-03
50	GO:0004713: protein tyrosine kinase activity	3.89E-03
51	GO:0047372: acylglycerol lipase activity	4.30E-03
52	GO:0003680: AT DNA binding	4.30E-03
53	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.15E-03
54	GO:0045735: nutrient reservoir activity	5.39E-03
55	GO:0004175: endopeptidase activity	5.60E-03
56	GO:0017025: TBP-class protein binding	6.06E-03
57	GO:0043424: protein histidine kinase binding	7.51E-03
58	GO:0005345: purine nucleobase transmembrane transporter activity	7.51E-03
59	GO:0015079: potassium ion transmembrane transporter activity	7.51E-03
60	GO:0030170: pyridoxal phosphate binding	9.01E-03
61	GO:0005524: ATP binding	9.95E-03
62	GO:0005451: monovalent cation:proton antiporter activity	1.08E-02
63	GO:0015299: solute:proton antiporter activity	1.19E-02
64	GO:0010181: FMN binding	1.19E-02
65	GO:0005355: glucose transmembrane transporter activity	1.19E-02
66	GO:0004197: cysteine-type endopeptidase activity	1.38E-02
67	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.43E-02
68	GO:0015385: sodium:proton antiporter activity	1.44E-02
69	GO:0004672: protein kinase activity	1.52E-02
70	GO:0020037: heme binding	1.70E-02
71	GO:0008375: acetylglucosaminyltransferase activity	1.85E-02
72	GO:0102483: scopolin beta-glucosidase activity	1.92E-02
73	GO:0030247: polysaccharide binding	1.92E-02
74	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.99E-02
75	GO:0004222: metalloendopeptidase activity	2.21E-02
76	GO:0016301: kinase activity	2.30E-02
77	GO:0005515: protein binding	2.58E-02
78	GO:0008422: beta-glucosidase activity	2.60E-02
79	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.80E-02
80	GO:0004364: glutathione transferase activity	2.84E-02
81	GO:0051537: 2 iron, 2 sulfur cluster binding	3.09E-02
82	GO:0004674: protein serine/threonine kinase activity	3.34E-02
83	GO:0043565: sequence-specific DNA binding	3.56E-02
84	GO:0016298: lipase activity	3.71E-02
85	GO:0031625: ubiquitin protein ligase binding	3.89E-02
86	GO:0008234: cysteine-type peptidase activity	3.89E-02
87	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.36E-02
88	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.36E-02
89	GO:0015035: protein disulfide oxidoreductase activity	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0098687: chromosomal region	0.00E+00
2	GO:0005886: plasma membrane	7.88E-06
3	GO:0016021: integral component of membrane	1.01E-05
4	GO:0005849: mRNA cleavage factor complex	7.24E-04
5	GO:0000323: lytic vacuole	7.24E-04
6	GO:0005794: Golgi apparatus	7.34E-04
7	GO:0005777: peroxisome	7.95E-04
8	GO:0033179: proton-transporting V-type ATPase, V0 domain	9.59E-04
9	GO:0005783: endoplasmic reticulum	1.04E-03
10	GO:0005773: vacuole	1.57E-03
11	GO:0031597: cytosolic proteasome complex	1.78E-03
12	GO:0030173: integral component of Golgi membrane	1.78E-03
13	GO:0009506: plasmodesma	2.05E-03
14	GO:0031595: nuclear proteasome complex	2.09E-03
15	GO:0005779: integral component of peroxisomal membrane	2.77E-03
16	GO:0008540: proteasome regulatory particle, base subcomplex	3.50E-03
17	GO:0005765: lysosomal membrane	4.30E-03
18	GO:0005774: vacuolar membrane	6.01E-03
19	GO:0030176: integral component of endoplasmic reticulum membrane	6.06E-03
20	GO:0016020: membrane	9.64E-03
21	GO:0005778: peroxisomal membrane	1.57E-02
22	GO:0005789: endoplasmic reticulum membrane	1.62E-02
23	GO:0000932: P-body	1.71E-02
24	GO:0005802: trans-Golgi network	2.41E-02
25	GO:0000502: proteasome complex	3.62E-02
26	GO:0005635: nuclear envelope	3.80E-02
27	GO:0010008: endosome membrane	4.17E-02
28	GO:0005732: small nucleolar ribonucleoprotein complex	4.94E-02