co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G05270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009715: chalcone biosynthetic process	0.00E+00
2	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
3	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
4	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
5	GO:0010425: DNA methylation on cytosine within a CNG sequence	0.00E+00
6	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
7	GO:0015822: ornithine transport	0.00E+00
8	GO:0080167: response to karrikin	1.39E-10
9	GO:0051555: flavonol biosynthetic process	2.43E-07
10	GO:0071555: cell wall organization	7.89E-07
11	GO:0010224: response to UV-B	1.10E-06
12	GO:0009813: flavonoid biosynthetic process	2.82E-06
13	GO:0045489: pectin biosynthetic process	9.05E-06
14	GO:0009963: positive regulation of flavonoid biosynthetic process	2.19E-05
15	GO:0009718: anthocyanin-containing compound biosynthetic process	3.25E-05
16	GO:0010218: response to far red light	6.19E-05
17	GO:0006559: L-phenylalanine catabolic process	9.33E-05
18	GO:0010114: response to red light	1.28E-04
19	GO:1901349: glucosinolate transport	2.39E-04
20	GO:1901537: positive regulation of DNA demethylation	2.39E-04
21	GO:0031539: positive regulation of anthocyanin metabolic process	2.39E-04
22	GO:0090449: phloem glucosinolate loading	2.39E-04
23	GO:0046244: salicylic acid catabolic process	2.39E-04
24	GO:0006659: phosphatidylserine biosynthetic process	2.39E-04
25	GO:0048438: floral whorl development	2.39E-04
26	GO:0000066: mitochondrial ornithine transport	2.39E-04
27	GO:0016119: carotene metabolic process	2.39E-04
28	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.51E-04
29	GO:0009698: phenylpropanoid metabolic process	5.19E-04
30	GO:0000272: polysaccharide catabolic process	5.19E-04
31	GO:0009629: response to gravity	5.29E-04
32	GO:0010069: zygote asymmetric cytokinesis in embryo sac	5.29E-04
33	GO:0000719: photoreactive repair	5.29E-04
34	GO:0019388: galactose catabolic process	5.29E-04
35	GO:0007154: cell communication	5.29E-04
36	GO:0010220: positive regulation of vernalization response	5.29E-04
37	GO:0080183: response to photooxidative stress	5.29E-04
38	GO:1900386: positive regulation of flavonol biosynthetic process	5.29E-04
39	GO:0071395: cellular response to jasmonic acid stimulus	5.29E-04
40	GO:0030036: actin cytoskeleton organization	6.71E-04
41	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	8.60E-04
42	GO:1901562: response to paraquat	8.60E-04
43	GO:0010253: UDP-rhamnose biosynthetic process	8.60E-04
44	GO:0046417: chorismate metabolic process	8.60E-04
45	GO:0040009: regulation of growth rate	8.60E-04
46	GO:0006651: diacylglycerol biosynthetic process	8.60E-04
47	GO:0052324: plant-type cell wall cellulose biosynthetic process	8.60E-04
48	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	8.60E-04
49	GO:0009926: auxin polar transport	1.07E-03
50	GO:0009800: cinnamic acid biosynthetic process	1.23E-03
51	GO:0009650: UV protection	1.23E-03
52	GO:0051016: barbed-end actin filament capping	1.23E-03
53	GO:0042823: pyridoxal phosphate biosynthetic process	1.23E-03
54	GO:0009590: detection of gravity	1.23E-03
55	GO:0010017: red or far-red light signaling pathway	1.36E-03
56	GO:0009411: response to UV	1.48E-03
57	GO:0051567: histone H3-K9 methylation	1.64E-03
58	GO:0006021: inositol biosynthetic process	1.64E-03
59	GO:0034613: cellular protein localization	1.64E-03
60	GO:0009694: jasmonic acid metabolic process	1.64E-03
61	GO:0009765: photosynthesis, light harvesting	1.64E-03
62	GO:0016117: carotenoid biosynthetic process	1.75E-03
63	GO:0000271: polysaccharide biosynthetic process	1.89E-03
64	GO:0009958: positive gravitropism	2.03E-03
65	GO:0016120: carotene biosynthetic process	2.09E-03
66	GO:0071368: cellular response to cytokinin stimulus	2.09E-03
67	GO:0016123: xanthophyll biosynthetic process	2.09E-03
68	GO:0009435: NAD biosynthetic process	2.09E-03
69	GO:0009791: post-embryonic development	2.34E-03
70	GO:0010315: auxin efflux	2.57E-03
71	GO:0000060: protein import into nucleus, translocation	2.57E-03
72	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.57E-03
73	GO:0006751: glutathione catabolic process	2.57E-03
74	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.57E-03
75	GO:0042732: D-xylose metabolic process	2.57E-03
76	GO:0010583: response to cyclopentenone	2.67E-03
77	GO:0009611: response to wounding	2.75E-03
78	GO:0010076: maintenance of floral meristem identity	3.09E-03
79	GO:0017148: negative regulation of translation	3.09E-03
80	GO:0045814: negative regulation of gene expression, epigenetic	3.09E-03
81	GO:0010555: response to mannitol	3.09E-03
82	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.09E-03
83	GO:0010077: maintenance of inflorescence meristem identity	3.09E-03
84	GO:2000067: regulation of root morphogenesis	3.09E-03
85	GO:0009733: response to auxin	3.37E-03
86	GO:0006400: tRNA modification	3.64E-03
87	GO:0051510: regulation of unidimensional cell growth	3.64E-03
88	GO:0098869: cellular oxidant detoxification	3.64E-03
89	GO:0005978: glycogen biosynthetic process	4.23E-03
90	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.23E-03
91	GO:0009819: drought recovery	4.23E-03
92	GO:0045010: actin nucleation	4.23E-03
93	GO:0031540: regulation of anthocyanin biosynthetic process	4.23E-03
94	GO:0052543: callose deposition in cell wall	4.23E-03
95	GO:0007155: cell adhesion	4.23E-03
96	GO:0007186: G-protein coupled receptor signaling pathway	4.84E-03
97	GO:0010099: regulation of photomorphogenesis	4.84E-03
98	GO:0009699: phenylpropanoid biosynthetic process	4.84E-03
99	GO:0022900: electron transport chain	4.84E-03
100	GO:0015996: chlorophyll catabolic process	4.84E-03
101	GO:0009056: catabolic process	5.48E-03
102	GO:0009739: response to gibberellin	5.60E-03
103	GO:0016051: carbohydrate biosynthetic process	5.96E-03
104	GO:0009637: response to blue light	5.96E-03
105	GO:0009638: phototropism	6.15E-03
106	GO:0043069: negative regulation of programmed cell death	6.85E-03
107	GO:0010192: mucilage biosynthetic process	6.85E-03
108	GO:0009073: aromatic amino acid family biosynthetic process	7.58E-03
109	GO:0009750: response to fructose	7.58E-03
110	GO:0048229: gametophyte development	7.58E-03
111	GO:0000038: very long-chain fatty acid metabolic process	7.58E-03
112	GO:0042546: cell wall biogenesis	7.99E-03
113	GO:0016024: CDP-diacylglycerol biosynthetic process	8.33E-03
114	GO:0010582: floral meristem determinacy	8.33E-03
115	GO:0016925: protein sumoylation	8.33E-03
116	GO:0006006: glucose metabolic process	9.11E-03
117	GO:0046274: lignin catabolic process	9.11E-03
118	GO:0018107: peptidyl-threonine phosphorylation	9.11E-03
119	GO:0010223: secondary shoot formation	9.92E-03
120	GO:0010540: basipetal auxin transport	9.92E-03
121	GO:0009934: regulation of meristem structural organization	9.92E-03
122	GO:0048768: root hair cell tip growth	9.92E-03
123	GO:0010143: cutin biosynthetic process	9.92E-03
124	GO:0009585: red, far-red light phototransduction	1.04E-02
125	GO:0030154: cell differentiation	1.05E-02
126	GO:0009225: nucleotide-sugar metabolic process	1.07E-02
127	GO:0009909: regulation of flower development	1.15E-02
128	GO:0042753: positive regulation of circadian rhythm	1.16E-02
129	GO:0009833: plant-type primary cell wall biogenesis	1.16E-02
130	GO:0006487: protein N-linked glycosylation	1.25E-02
131	GO:0009695: jasmonic acid biosynthetic process	1.34E-02
132	GO:0009768: photosynthesis, light harvesting in photosystem I	1.34E-02
133	GO:0006306: DNA methylation	1.43E-02
134	GO:0031408: oxylipin biosynthetic process	1.43E-02
135	GO:0051260: protein homooligomerization	1.43E-02
136	GO:0009742: brassinosteroid mediated signaling pathway	1.57E-02
137	GO:0040007: growth	1.62E-02
138	GO:0019722: calcium-mediated signaling	1.72E-02
139	GO:0042127: regulation of cell proliferation	1.72E-02
140	GO:0010584: pollen exine formation	1.72E-02
141	GO:0005975: carbohydrate metabolic process	1.87E-02
142	GO:0015991: ATP hydrolysis coupled proton transport	1.93E-02
143	GO:0048653: anther development	1.93E-02
144	GO:0006520: cellular amino acid metabolic process	2.03E-02
145	GO:0006342: chromatin silencing	2.03E-02
146	GO:0009741: response to brassinosteroid	2.03E-02
147	GO:0008152: metabolic process	2.06E-02
148	GO:0015986: ATP synthesis coupled proton transport	2.14E-02
149	GO:0009749: response to glucose	2.25E-02
150	GO:0019252: starch biosynthetic process	2.25E-02
151	GO:0008654: phospholipid biosynthetic process	2.25E-02
152	GO:0006633: fatty acid biosynthetic process	2.33E-02
153	GO:0071554: cell wall organization or biogenesis	2.36E-02
154	GO:1901657: glycosyl compound metabolic process	2.59E-02
155	GO:0006468: protein phosphorylation	2.64E-02
156	GO:0010252: auxin homeostasis	2.71E-02
157	GO:0007267: cell-cell signaling	2.83E-02
158	GO:0009911: positive regulation of flower development	3.07E-02
159	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.19E-02
160	GO:0048573: photoperiodism, flowering	3.45E-02
161	GO:0016311: dephosphorylation	3.58E-02
162	GO:0030244: cellulose biosynthetic process	3.71E-02
163	GO:0018298: protein-chromophore linkage	3.71E-02
164	GO:0009832: plant-type cell wall biogenesis	3.84E-02
165	GO:0010311: lateral root formation	3.84E-02
166	GO:0006811: ion transport	3.97E-02
167	GO:0035556: intracellular signal transduction	3.99E-02
168	GO:0010119: regulation of stomatal movement	4.11E-02
169	GO:0007568: aging	4.11E-02
170	GO:0009867: jasmonic acid mediated signaling pathway	4.39E-02
171	GO:0055114: oxidation-reduction process	4.47E-02
172	GO:0009723: response to ethylene	4.57E-02
173	GO:0006839: mitochondrial transport	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
2	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
3	GO:0003904: deoxyribodipyrimidine photo-lyase activity	0.00E+00
4	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
5	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
6	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
7	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
8	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
9	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
10	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
11	GO:0047890: flavanone 4-reductase activity	0.00E+00
12	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
13	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
14	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
15	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
16	GO:0008734: L-aspartate oxidase activity	0.00E+00
17	GO:0016757: transferase activity, transferring glycosyl groups	2.12E-07
18	GO:0016161: beta-amylase activity	1.29E-04
19	GO:0080132: fatty acid alpha-hydroxylase activity	2.39E-04
20	GO:0010313: phytochrome binding	2.39E-04
21	GO:0090448: glucosinolate:proton symporter activity	2.39E-04
22	GO:0004837: tyrosine decarboxylase activity	2.39E-04
23	GO:0046982: protein heterodimerization activity	3.17E-04
24	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.30E-04
25	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.30E-04
26	GO:0000064: L-ornithine transmembrane transporter activity	5.29E-04
27	GO:0004106: chorismate mutase activity	5.29E-04
28	GO:0004614: phosphoglucomutase activity	5.29E-04
29	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.29E-04
30	GO:0004512: inositol-3-phosphate synthase activity	5.29E-04
31	GO:0048531: beta-1,3-galactosyltransferase activity	5.29E-04
32	GO:0010291: carotene beta-ring hydroxylase activity	5.29E-04
33	GO:0004566: beta-glucuronidase activity	5.29E-04
34	GO:0016868: intramolecular transferase activity, phosphotransferases	5.29E-04
35	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.29E-04
36	GO:0003839: gamma-glutamylcyclotransferase activity	5.29E-04
37	GO:0010280: UDP-L-rhamnose synthase activity	5.29E-04
38	GO:0045548: phenylalanine ammonia-lyase activity	8.60E-04
39	GO:0003913: DNA photolyase activity	8.60E-04
40	GO:0008253: 5'-nucleotidase activity	8.60E-04
41	GO:0031683: G-protein beta/gamma-subunit complex binding	8.60E-04
42	GO:0033897: ribonuclease T2 activity	8.60E-04
43	GO:0001664: G-protein coupled receptor binding	8.60E-04
44	GO:0008194: UDP-glycosyltransferase activity	1.04E-03
45	GO:0031418: L-ascorbic acid binding	1.04E-03
46	GO:0048027: mRNA 5'-UTR binding	1.23E-03
47	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.23E-03
48	GO:0001872: (1->3)-beta-D-glucan binding	1.23E-03
49	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.36E-03
50	GO:0098599: palmitoyl hydrolase activity	1.64E-03
51	GO:0045430: chalcone isomerase activity	1.64E-03
52	GO:0052793: pectin acetylesterase activity	1.64E-03
53	GO:0046527: glucosyltransferase activity	1.64E-03
54	GO:0080032: methyl jasmonate esterase activity	1.64E-03
55	GO:0031386: protein tag	2.09E-03
56	GO:0045431: flavonol synthase activity	2.09E-03
57	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.57E-03
58	GO:0102229: amylopectin maltohydrolase activity	2.57E-03
59	GO:0035252: UDP-xylosyltransferase activity	2.57E-03
60	GO:0016688: L-ascorbate peroxidase activity	2.57E-03
61	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.57E-03
62	GO:0080030: methyl indole-3-acetate esterase activity	2.57E-03
63	GO:0008474: palmitoyl-(protein) hydrolase activity	2.57E-03
64	GO:0008429: phosphatidylethanolamine binding	2.57E-03
65	GO:0016759: cellulose synthase activity	3.03E-03
66	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	3.09E-03
67	GO:0008195: phosphatidate phosphatase activity	3.09E-03
68	GO:0016758: transferase activity, transferring hexosyl groups	3.11E-03
69	GO:0019899: enzyme binding	3.64E-03
70	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.64E-03
71	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.64E-03
72	GO:0016621: cinnamoyl-CoA reductase activity	3.64E-03
73	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.23E-03
74	GO:0030247: polysaccharide binding	4.25E-03
75	GO:0016207: 4-coumarate-CoA ligase activity	5.48E-03
76	GO:0004672: protein kinase activity	5.71E-03
77	GO:0009672: auxin:proton symporter activity	6.15E-03
78	GO:0030955: potassium ion binding	6.15E-03
79	GO:0004743: pyruvate kinase activity	6.15E-03
80	GO:0004860: protein kinase inhibitor activity	7.58E-03
81	GO:0046961: proton-transporting ATPase activity, rotational mechanism	7.58E-03
82	GO:0008327: methyl-CpG binding	7.58E-03
83	GO:0004521: endoribonuclease activity	8.33E-03
84	GO:0010329: auxin efflux transmembrane transporter activity	9.11E-03
85	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.92E-03
86	GO:0043565: sequence-specific DNA binding	1.04E-02
87	GO:0051119: sugar transmembrane transporter activity	1.07E-02
88	GO:0031409: pigment binding	1.16E-02
89	GO:0003677: DNA binding	1.18E-02
90	GO:0052689: carboxylic ester hydrolase activity	1.26E-02
91	GO:0004650: polygalacturonase activity	1.35E-02
92	GO:0004540: ribonuclease activity	1.43E-02
93	GO:0004176: ATP-dependent peptidase activity	1.43E-02
94	GO:0035251: UDP-glucosyltransferase activity	1.43E-02
95	GO:0016491: oxidoreductase activity	1.46E-02
96	GO:0016760: cellulose synthase (UDP-forming) activity	1.62E-02
97	GO:0016829: lyase activity	2.01E-02
98	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.11E-02
99	GO:0050662: coenzyme binding	2.14E-02
100	GO:0016853: isomerase activity	2.14E-02
101	GO:0019901: protein kinase binding	2.25E-02
102	GO:0046910: pectinesterase inhibitor activity	2.39E-02
103	GO:0004518: nuclease activity	2.47E-02
104	GO:0051015: actin filament binding	2.59E-02
105	GO:0016791: phosphatase activity	2.71E-02
106	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.83E-02
107	GO:0008237: metallopeptidase activity	2.83E-02
108	GO:0005200: structural constituent of cytoskeleton	2.83E-02
109	GO:0016413: O-acetyltransferase activity	2.95E-02
110	GO:0005515: protein binding	3.10E-02
111	GO:0016887: ATPase activity	3.16E-02
112	GO:0016168: chlorophyll binding	3.19E-02
113	GO:0008375: acetylglucosaminyltransferase activity	3.32E-02
114	GO:0003824: catalytic activity	3.36E-02
115	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.45E-02
116	GO:0102483: scopolin beta-glucosidase activity	3.45E-02
117	GO:0000287: magnesium ion binding	3.89E-02
118	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.97E-02
119	GO:0004222: metalloendopeptidase activity	3.97E-02
120	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.02E-02
121	GO:0016788: hydrolase activity, acting on ester bonds	4.03E-02
122	GO:0008422: beta-glucosidase activity	4.67E-02
123	GO:0016740: transferase activity	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	9.64E-06
2	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	5.29E-04
3	GO:0009509: chromoplast	8.60E-04
4	GO:0010330: cellulose synthase complex	8.60E-04
5	GO:0005794: Golgi apparatus	9.13E-04
6	GO:0009505: plant-type cell wall	1.25E-03
7	GO:0046658: anchored component of plasma membrane	1.34E-03
8	GO:0000139: Golgi membrane	1.48E-03
9	GO:0031225: anchored component of membrane	1.60E-03
10	GO:0010369: chromocenter	3.09E-03
11	GO:0043231: intracellular membrane-bounded organelle	4.97E-03
12	GO:0000786: nucleosome	5.69E-03
13	GO:0005765: lysosomal membrane	7.58E-03
14	GO:0009506: plasmodesma	8.95E-03
15	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.07E-02
16	GO:0030076: light-harvesting complex	1.07E-02
17	GO:0005886: plasma membrane	1.22E-02
18	GO:0005618: cell wall	1.51E-02
19	GO:0010287: plastoglobule	1.76E-02
20	GO:0009522: photosystem I	2.14E-02
21	GO:0009523: photosystem II	2.25E-02
22	GO:0000785: chromatin	2.47E-02
23	GO:0009705: plant-type vacuole membrane	2.56E-02
24	GO:0071944: cell periphery	2.59E-02
25	GO:0010319: stromule	2.83E-02
26	GO:0016021: integral component of membrane	3.45E-02
27	GO:0009536: plastid	3.95E-02
28	GO:0005737: cytoplasm	4.24E-02
29	GO:0009507: chloroplast	4.90E-02