co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G04930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0043201: response to leucine	0.00E+00
3	GO:0080052: response to histidine	0.00E+00
4	GO:0080053: response to phenylalanine	0.00E+00
5	GO:0000162: tryptophan biosynthetic process	9.20E-06
6	GO:0071456: cellular response to hypoxia	1.80E-05
7	GO:0030091: protein repair	6.23E-05
8	GO:0010120: camalexin biosynthetic process	7.89E-05
9	GO:0034975: protein folding in endoplasmic reticulum	1.06E-04
10	GO:1990641: response to iron ion starvation	1.06E-04
11	GO:0006643: membrane lipid metabolic process	1.06E-04
12	GO:1901183: positive regulation of camalexin biosynthetic process	1.06E-04
13	GO:0042759: long-chain fatty acid biosynthetic process	1.06E-04
14	GO:0009682: induced systemic resistance	1.65E-04
15	GO:0009617: response to bacterium	1.96E-04
16	GO:0055046: microgametogenesis	2.19E-04
17	GO:0006212: uracil catabolic process	2.48E-04
18	GO:0019374: galactolipid metabolic process	2.48E-04
19	GO:0006101: citrate metabolic process	2.48E-04
20	GO:0019483: beta-alanine biosynthetic process	2.48E-04
21	GO:0042939: tripeptide transport	2.48E-04
22	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.48E-04
23	GO:0010498: proteasomal protein catabolic process	4.12E-04
24	GO:0009561: megagametogenesis	5.47E-04
25	GO:0000187: activation of MAPK activity	5.92E-04
26	GO:0010116: positive regulation of abscisic acid biosynthetic process	5.92E-04
27	GO:0048194: Golgi vesicle budding	5.92E-04
28	GO:0046513: ceramide biosynthetic process	5.92E-04
29	GO:0048830: adventitious root development	7.86E-04
30	GO:0010600: regulation of auxin biosynthetic process	7.86E-04
31	GO:2000038: regulation of stomatal complex development	7.86E-04
32	GO:0080142: regulation of salicylic acid biosynthetic process	7.86E-04
33	GO:0042938: dipeptide transport	7.86E-04
34	GO:0009851: auxin biosynthetic process	7.87E-04
35	GO:0006097: glyoxylate cycle	9.92E-04
36	GO:0000304: response to singlet oxygen	9.92E-04
37	GO:0009697: salicylic acid biosynthetic process	9.92E-04
38	GO:0006564: L-serine biosynthetic process	9.92E-04
39	GO:0010150: leaf senescence	1.16E-03
40	GO:1900425: negative regulation of defense response to bacterium	1.21E-03
41	GO:0002238: response to molecule of fungal origin	1.21E-03
42	GO:0009759: indole glucosinolate biosynthetic process	1.21E-03
43	GO:0006561: proline biosynthetic process	1.21E-03
44	GO:0042742: defense response to bacterium	1.23E-03
45	GO:0006979: response to oxidative stress	1.24E-03
46	GO:0009816: defense response to bacterium, incompatible interaction	1.26E-03
47	GO:0055114: oxidation-reduction process	1.40E-03
48	GO:2000037: regulation of stomatal complex patterning	1.45E-03
49	GO:0009648: photoperiodism	1.45E-03
50	GO:0010044: response to aluminum ion	1.70E-03
51	GO:0046470: phosphatidylcholine metabolic process	1.70E-03
52	GO:1900056: negative regulation of leaf senescence	1.70E-03
53	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.70E-03
54	GO:1902074: response to salt	1.70E-03
55	GO:0006102: isocitrate metabolic process	1.97E-03
56	GO:0006644: phospholipid metabolic process	1.97E-03
57	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.97E-03
58	GO:1900150: regulation of defense response to fungus	1.97E-03
59	GO:0006099: tricarboxylic acid cycle	2.03E-03
60	GO:0043562: cellular response to nitrogen levels	2.24E-03
61	GO:0009808: lignin metabolic process	2.24E-03
62	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.24E-03
63	GO:0010204: defense response signaling pathway, resistance gene-independent	2.24E-03
64	GO:0051707: response to other organism	2.49E-03
65	GO:0010112: regulation of systemic acquired resistance	2.53E-03
66	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.84E-03
67	GO:0042538: hyperosmotic salinity response	3.12E-03
68	GO:0009641: shade avoidance	3.15E-03
69	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.15E-03
70	GO:0009688: abscisic acid biosynthetic process	3.15E-03
71	GO:0009684: indoleacetic acid biosynthetic process	3.47E-03
72	GO:0052544: defense response by callose deposition in cell wall	3.47E-03
73	GO:0009089: lysine biosynthetic process via diaminopimelate	3.47E-03
74	GO:0000266: mitochondrial fission	3.81E-03
75	GO:0016042: lipid catabolic process	4.15E-03
76	GO:0010229: inflorescence development	4.16E-03
77	GO:0009718: anthocyanin-containing compound biosynthetic process	4.16E-03
78	GO:0006807: nitrogen compound metabolic process	4.16E-03
79	GO:0009626: plant-type hypersensitive response	4.21E-03
80	GO:0002237: response to molecule of bacterial origin	4.52E-03
81	GO:0007030: Golgi organization	4.88E-03
82	GO:0005992: trehalose biosynthetic process	5.65E-03
83	GO:0080147: root hair cell development	5.65E-03
84	GO:0016998: cell wall macromolecule catabolic process	6.46E-03
85	GO:0009814: defense response, incompatible interaction	6.87E-03
86	GO:0010227: floral organ abscission	7.30E-03
87	GO:0006012: galactose metabolic process	7.30E-03
88	GO:0010584: pollen exine formation	7.74E-03
89	GO:0009306: protein secretion	7.74E-03
90	GO:0040008: regulation of growth	7.82E-03
91	GO:0008360: regulation of cell shape	9.10E-03
92	GO:0006885: regulation of pH	9.10E-03
93	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	9.17E-03
94	GO:0007166: cell surface receptor signaling pathway	9.37E-03
95	GO:0048544: recognition of pollen	9.58E-03
96	GO:0000302: response to reactive oxygen species	1.06E-02
97	GO:0010252: auxin homeostasis	1.21E-02
98	GO:0006464: cellular protein modification process	1.21E-02
99	GO:0009627: systemic acquired resistance	1.48E-02
100	GO:0048366: leaf development	1.50E-02
101	GO:0006468: protein phosphorylation	1.54E-02
102	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.63E-02
103	GO:0009817: defense response to fungus, incompatible interaction	1.65E-02
104	GO:0016192: vesicle-mediated transport	1.66E-02
105	GO:0009737: response to abscisic acid	1.66E-02
106	GO:0009813: flavonoid biosynthetic process	1.71E-02
107	GO:0010311: lateral root formation	1.71E-02
108	GO:0044550: secondary metabolite biosynthetic process	1.72E-02
109	GO:0009407: toxin catabolic process	1.77E-02
110	GO:0032259: methylation	2.23E-02
111	GO:0009751: response to salicylic acid	2.30E-02
112	GO:0010114: response to red light	2.34E-02
113	GO:0000209: protein polyubiquitination	2.41E-02
114	GO:0009636: response to toxic substance	2.54E-02
115	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.68E-02
116	GO:0000165: MAPK cascade	2.68E-02
117	GO:0009846: pollen germination	2.75E-02
118	GO:0006812: cation transport	2.75E-02
119	GO:0009809: lignin biosynthetic process	2.89E-02
120	GO:0006813: potassium ion transport	2.89E-02
121	GO:0006857: oligopeptide transport	3.04E-02
122	GO:0009620: response to fungus	3.49E-02
123	GO:0009735: response to cytokinin	3.78E-02
124	GO:0046686: response to cadmium ion	3.78E-02
125	GO:0051726: regulation of cell cycle	3.88E-02
126	GO:0009742: brassinosteroid mediated signaling pathway	3.88E-02
127	GO:0009611: response to wounding	4.22E-02
128	GO:0042744: hydrogen peroxide catabolic process	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0003837: beta-ureidopropionase activity	0.00E+00
2	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.53E-05
3	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.06E-04
4	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.06E-04
5	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.06E-04
6	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.06E-04
7	GO:0050291: sphingosine N-acyltransferase activity	2.48E-04
8	GO:0003994: aconitate hydratase activity	2.48E-04
9	GO:0042937: tripeptide transporter activity	2.48E-04
10	GO:0004049: anthranilate synthase activity	4.12E-04
11	GO:0004383: guanylate cyclase activity	4.12E-04
12	GO:0042936: dipeptide transporter activity	7.86E-04
13	GO:0004031: aldehyde oxidase activity	7.86E-04
14	GO:0050302: indole-3-acetaldehyde oxidase activity	7.86E-04
15	GO:0010279: indole-3-acetic acid amido synthetase activity	7.86E-04
16	GO:0045431: flavonol synthase activity	9.92E-04
17	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	9.92E-04
18	GO:0005509: calcium ion binding	1.07E-03
19	GO:0005506: iron ion binding	1.19E-03
20	GO:0030247: polysaccharide binding	1.40E-03
21	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.45E-03
22	GO:0004012: phospholipid-translocating ATPase activity	1.45E-03
23	GO:0004656: procollagen-proline 4-dioxygenase activity	1.45E-03
24	GO:0004143: diacylglycerol kinase activity	1.70E-03
25	GO:0005085: guanyl-nucleotide exchange factor activity	1.70E-03
26	GO:0004620: phospholipase activity	1.70E-03
27	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.78E-03
28	GO:0004034: aldose 1-epimerase activity	1.97E-03
29	GO:0004708: MAP kinase kinase activity	1.97E-03
30	GO:0004674: protein serine/threonine kinase activity	2.01E-03
31	GO:0003843: 1,3-beta-D-glucan synthase activity	2.24E-03
32	GO:0004630: phospholipase D activity	2.24E-03
33	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.24E-03
34	GO:0050660: flavin adenine dinucleotide binding	2.41E-03
35	GO:0045309: protein phosphorylated amino acid binding	2.84E-03
36	GO:0047617: acyl-CoA hydrolase activity	2.84E-03
37	GO:0008171: O-methyltransferase activity	3.15E-03
38	GO:0004713: protein tyrosine kinase activity	3.15E-03
39	GO:0019904: protein domain specific binding	3.47E-03
40	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.64E-03
41	GO:0045735: nutrient reservoir activity	3.95E-03
42	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.16E-03
43	GO:0016301: kinase activity	4.32E-03
44	GO:0009055: electron carrier activity	4.70E-03
45	GO:0015035: protein disulfide oxidoreductase activity	4.89E-03
46	GO:0031418: L-ascorbic acid binding	5.65E-03
47	GO:0003954: NADH dehydrogenase activity	5.65E-03
48	GO:0003756: protein disulfide isomerase activity	7.74E-03
49	GO:0004499: N,N-dimethylaniline monooxygenase activity	7.74E-03
50	GO:0005451: monovalent cation:proton antiporter activity	8.64E-03
51	GO:0016853: isomerase activity	9.58E-03
52	GO:0015299: solute:proton antiporter activity	9.58E-03
53	GO:0020037: heme binding	1.06E-02
54	GO:0015385: sodium:proton antiporter activity	1.16E-02
55	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.16E-02
56	GO:0008483: transaminase activity	1.26E-02
57	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.26E-02
58	GO:0030246: carbohydrate binding	1.30E-02
59	GO:0005524: ATP binding	1.40E-02
60	GO:0005507: copper ion binding	1.40E-02
61	GO:0019825: oxygen binding	1.40E-02
62	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.59E-02
63	GO:0061630: ubiquitin protein ligase activity	1.66E-02
64	GO:0030145: manganese ion binding	1.83E-02
65	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.95E-02
66	GO:0050661: NADP binding	2.14E-02
67	GO:0051539: 4 iron, 4 sulfur cluster binding	2.14E-02
68	GO:0004364: glutathione transferase activity	2.27E-02
69	GO:0051537: 2 iron, 2 sulfur cluster binding	2.47E-02
70	GO:0016746: transferase activity, transferring acyl groups	3.80E-02
71	GO:0030170: pyridoxal phosphate binding	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	8.12E-06
2	GO:0045252: oxoglutarate dehydrogenase complex	1.06E-04
3	GO:0005950: anthranilate synthase complex	2.48E-04
4	GO:0031304: intrinsic component of mitochondrial inner membrane	2.48E-04
5	GO:0005783: endoplasmic reticulum	4.48E-04
6	GO:0032588: trans-Golgi network membrane	1.21E-03
7	GO:0030173: integral component of Golgi membrane	1.45E-03
8	GO:0000148: 1,3-beta-D-glucan synthase complex	2.24E-03
9	GO:0031901: early endosome membrane	2.53E-03
10	GO:0005829: cytosol	4.67E-03
11	GO:0005770: late endosome	9.10E-03
12	GO:0009504: cell plate	1.01E-02
13	GO:0016021: integral component of membrane	1.03E-02
14	GO:0031225: anchored component of membrane	1.57E-02
15	GO:0000325: plant-type vacuole	1.83E-02
16	GO:0009536: plastid	2.81E-02
17	GO:0009570: chloroplast stroma	3.18E-02
18	GO:0016020: membrane	3.45E-02
19	GO:0005789: endoplasmic reticulum membrane	3.69E-02
20	GO:0009524: phragmoplast	4.53E-02