Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G04910

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048358: mucilage pectin biosynthetic process2.75E-06
2GO:0010393: galacturonan metabolic process2.75E-06
3GO:0071217: cellular response to external biotic stimulus7.70E-06
4GO:0046898: response to cycloheximide7.70E-06
5GO:2001020: regulation of response to DNA damage stimulus7.70E-06
6GO:0016570: histone modification1.45E-05
7GO:0010272: response to silver ion1.45E-05
8GO:0080001: mucilage extrusion from seed coat2.28E-05
9GO:0048359: mucilage metabolic process involved in seed coat development4.33E-05
10GO:1902183: regulation of shoot apical meristem development4.33E-05
11GO:0010225: response to UV-C4.33E-05
12GO:0047484: regulation of response to osmotic stress5.52E-05
13GO:1901001: negative regulation of response to salt stress6.80E-05
14GO:1902074: response to salt8.18E-05
15GO:0045995: regulation of embryonic development8.18E-05
16GO:0006368: transcription elongation from RNA polymerase II promoter8.18E-05
17GO:0000338: protein deneddylation8.18E-05
18GO:0009827: plant-type cell wall modification1.11E-04
19GO:2000024: regulation of leaf development1.27E-04
20GO:0010332: response to gamma radiation1.27E-04
21GO:0007064: mitotic sister chromatid cohesion1.60E-04
22GO:0009870: defense response signaling pathway, resistance gene-dependent1.60E-04
23GO:0010192: mucilage biosynthetic process1.60E-04
24GO:0006325: chromatin organization1.60E-04
25GO:0045892: negative regulation of transcription, DNA-templated2.19E-04
26GO:0006446: regulation of translational initiation2.33E-04
27GO:0006281: DNA repair2.67E-04
28GO:0009944: polarity specification of adaxial/abaxial axis2.91E-04
29GO:0010073: meristem maintenance3.11E-04
30GO:0009908: flower development4.26E-04
31GO:0042752: regulation of circadian rhythm4.82E-04
32GO:0009556: microsporogenesis5.05E-04
33GO:0045893: positive regulation of transcription, DNA-templated5.37E-04
34GO:0030163: protein catabolic process5.74E-04
35GO:0001666: response to hypoxia6.69E-04
36GO:0006974: cellular response to DNA damage stimulus7.18E-04
37GO:0009910: negative regulation of flower development8.71E-04
38GO:0009640: photomorphogenesis1.09E-03
39GO:0009585: red, far-red light phototransduction1.32E-03
40GO:0009909: regulation of flower development1.41E-03
41GO:0009620: response to fungus1.56E-03
42GO:0009624: response to nematode1.66E-03
43GO:0051726: regulation of cell cycle1.72E-03
44GO:0009790: embryo development2.14E-03
45GO:0007623: circadian rhythm2.39E-03
46GO:0009617: response to bacterium2.69E-03
47GO:0009611: response to wounding7.30E-03
48GO:0009414: response to water deprivation1.16E-02
49GO:0042742: defense response to bacterium1.18E-02
50GO:0006979: response to oxidative stress1.19E-02
51GO:0030154: cell differentiation1.25E-02
52GO:0009733: response to auxin1.28E-02
53GO:0007275: multicellular organism development1.91E-02
54GO:0016310: phosphorylation2.23E-02
55GO:0006351: transcription, DNA-templated4.97E-02
RankGO TermAdjusted P value
1GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding7.70E-06
2GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding1.45E-05
3GO:0003714: transcription corepressor activity2.91E-04
4GO:0003713: transcription coactivator activity4.60E-04
5GO:0003743: translation initiation factor activity2.65E-03
6GO:0005515: protein binding5.19E-03
7GO:0003824: catalytic activity1.26E-02
8GO:0016787: hydrolase activity2.03E-02
9GO:0003676: nucleic acid binding3.24E-02
10GO:0004674: protein serine/threonine kinase activity3.68E-02
11GO:0043565: sequence-specific DNA binding3.78E-02
RankGO TermAdjusted P value
1GO:0016593: Cdc73/Paf1 complex3.25E-05
2GO:0008180: COP9 signalosome1.27E-04
3GO:0005634: nucleus4.77E-04
4GO:0000785: chromatin5.50E-04
5GO:0030529: intracellular ribonucleoprotein complex6.69E-04
6GO:0005829: cytosol1.08E-02
7GO:0009536: plastid1.36E-02
8GO:0005730: nucleolus1.71E-02
Gene type



Gene DE type