Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G02540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042493: response to drug0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:0042759: long-chain fatty acid biosynthetic process3.37E-05
4GO:0042371: vitamin K biosynthetic process3.37E-05
5GO:0042335: cuticle development1.41E-04
6GO:0015714: phosphoenolpyruvate transport1.47E-04
7GO:0090391: granum assembly1.47E-04
8GO:0006013: mannose metabolic process1.47E-04
9GO:0009650: UV protection2.18E-04
10GO:0006168: adenine salvage2.18E-04
11GO:0006166: purine ribonucleoside salvage2.18E-04
12GO:0015713: phosphoglycerate transport2.95E-04
13GO:0010236: plastoquinone biosynthetic process3.77E-04
14GO:0044209: AMP salvage3.77E-04
15GO:0048359: mucilage metabolic process involved in seed coat development3.77E-04
16GO:0035435: phosphate ion transmembrane transport4.63E-04
17GO:0042372: phylloquinone biosynthetic process5.53E-04
18GO:0006869: lipid transport5.65E-04
19GO:0016042: lipid catabolic process6.31E-04
20GO:0008643: carbohydrate transport6.38E-04
21GO:0009395: phospholipid catabolic process6.47E-04
22GO:0009772: photosynthetic electron transport in photosystem II6.47E-04
23GO:0010196: nonphotochemical quenching6.47E-04
24GO:0015780: nucleotide-sugar transport9.49E-04
25GO:0006535: cysteine biosynthetic process from serine1.17E-03
26GO:0071732: cellular response to nitric oxide1.78E-03
27GO:0010025: wax biosynthetic process1.91E-03
28GO:0019344: cysteine biosynthetic process2.05E-03
29GO:0000027: ribosomal large subunit assembly2.05E-03
30GO:0030245: cellulose catabolic process2.48E-03
31GO:0009411: response to UV2.63E-03
32GO:0071369: cellular response to ethylene stimulus2.63E-03
33GO:0009860: pollen tube growth3.07E-03
34GO:0071555: cell wall organization3.22E-03
35GO:0071281: cellular response to iron ion4.10E-03
36GO:0009567: double fertilization forming a zygote and endosperm4.28E-03
37GO:0010027: thylakoid membrane organization4.83E-03
38GO:0009627: systemic acquired resistance5.21E-03
39GO:0007568: aging6.40E-03
40GO:0009735: response to cytokinin8.40E-03
41GO:0009809: lignin biosynthetic process1.00E-02
42GO:0051726: regulation of cell cycle1.34E-02
43GO:0045490: pectin catabolic process1.89E-02
44GO:0042254: ribosome biogenesis2.62E-02
45GO:0006810: transport2.75E-02
46GO:0007049: cell cycle2.79E-02
47GO:0005975: carbohydrate metabolic process2.84E-02
48GO:0032259: methylation3.85E-02
49GO:0006281: DNA repair3.97E-02
50GO:0016310: phosphorylation4.57E-02
RankGO TermAdjusted P value
1GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
2GO:0016788: hydrolase activity, acting on ester bonds6.95E-07
3GO:0005080: protein kinase C binding3.37E-05
4GO:0030794: (S)-coclaurine-N-methyltransferase activity3.37E-05
5GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.37E-05
6GO:0015121: phosphoenolpyruvate:phosphate antiporter activity3.37E-05
7GO:0052689: carboxylic ester hydrolase activity3.58E-05
8GO:0003999: adenine phosphoribosyltransferase activity2.18E-04
9GO:0015120: phosphoglycerate transmembrane transporter activity2.95E-04
10GO:0004659: prenyltransferase activity2.95E-04
11GO:0052793: pectin acetylesterase activity2.95E-04
12GO:0004040: amidase activity3.77E-04
13GO:0051753: mannan synthase activity5.53E-04
14GO:0004559: alpha-mannosidase activity5.53E-04
15GO:0004124: cysteine synthase activity5.53E-04
16GO:0052747: sinapyl alcohol dehydrogenase activity7.44E-04
17GO:0008289: lipid binding9.82E-04
18GO:0045551: cinnamyl-alcohol dehydrogenase activity1.40E-03
19GO:0015114: phosphate ion transmembrane transporter activity1.52E-03
20GO:0004565: beta-galactosidase activity1.52E-03
21GO:0005528: FK506 binding2.05E-03
22GO:0030570: pectate lyase activity2.63E-03
23GO:0008810: cellulase activity2.63E-03
24GO:0008514: organic anion transmembrane transporter activity2.78E-03
25GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity3.25E-03
26GO:0003993: acid phosphatase activity7.04E-03
27GO:0003755: peptidyl-prolyl cis-trans isomerase activity9.06E-03
28GO:0000166: nucleotide binding9.19E-03
29GO:0016740: transferase activity1.12E-02
30GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.15E-02
31GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.21E-02
32GO:0022857: transmembrane transporter activity1.23E-02
33GO:0030246: carbohydrate binding1.24E-02
34GO:0019843: rRNA binding1.51E-02
35GO:0016829: lyase activity1.59E-02
36GO:0030170: pyridoxal phosphate binding1.62E-02
37GO:0015297: antiporter activity1.83E-02
38GO:0008168: methyltransferase activity2.51E-02
39GO:0009055: electron carrier activity4.18E-02
RankGO TermAdjusted P value
1GO:0009505: plant-type cell wall9.98E-06
2GO:0009515: granal stacked thylakoid3.37E-05
3GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex3.37E-05
4GO:0005576: extracellular region1.46E-04
5GO:0009509: chromoplast1.47E-04
6GO:0048046: apoplast1.53E-04
7GO:0046658: anchored component of plasma membrane2.46E-04
8GO:0031225: anchored component of membrane3.57E-04
9GO:0009543: chloroplast thylakoid lumen1.36E-03
10GO:0005886: plasma membrane1.55E-03
11GO:0031969: chloroplast membrane3.53E-03
12GO:0005618: cell wall4.26E-03
13GO:0031977: thylakoid lumen7.69E-03
14GO:0009570: chloroplast stroma9.13E-03
15GO:0009534: chloroplast thylakoid1.11E-02
16GO:0005794: Golgi apparatus1.31E-02
17GO:0009507: chloroplast1.59E-02
18GO:0009941: chloroplast envelope2.29E-02
19GO:0022625: cytosolic large ribosomal subunit3.12E-02
20GO:0009535: chloroplast thylakoid membrane4.17E-02
Gene type



Gene DE type