co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G02050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072321: chaperone-mediated protein transport	0.00E+00
2	GO:0071433: cell wall repair	0.00E+00
3	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
4	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.46E-07
5	GO:0045039: protein import into mitochondrial inner membrane	5.64E-07
6	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	4.88E-05
7	GO:0006177: GMP biosynthetic process	4.88E-05
8	GO:0008535: respiratory chain complex IV assembly	1.20E-04
9	GO:0033617: mitochondrial respiratory chain complex IV assembly	3.01E-04
10	GO:0007276: gamete generation	3.01E-04
11	GO:0009855: determination of bilateral symmetry	3.01E-04
12	GO:1900864: mitochondrial RNA modification	4.04E-04
13	GO:0042273: ribosomal large subunit biogenesis	4.04E-04
14	GO:0051205: protein insertion into membrane	4.04E-04
15	GO:0000460: maturation of 5.8S rRNA	4.04E-04
16	GO:0031365: N-terminal protein amino acid modification	5.13E-04
17	GO:0006461: protein complex assembly	5.13E-04
18	GO:0010405: arabinogalactan protein metabolic process	6.29E-04
19	GO:0000470: maturation of LSU-rRNA	6.29E-04
20	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.29E-04
21	GO:0042026: protein refolding	7.50E-04
22	GO:0006458: 'de novo' protein folding	7.50E-04
23	GO:1900056: negative regulation of leaf senescence	8.75E-04
24	GO:0080186: developmental vegetative growth	8.75E-04
25	GO:0045454: cell redox homeostasis	9.09E-04
26	GO:0006605: protein targeting	1.01E-03
27	GO:0050821: protein stabilization	1.01E-03
28	GO:0009699: phenylpropanoid biosynthetic process	1.14E-03
29	GO:0006364: rRNA processing	1.23E-03
30	GO:0006486: protein glycosylation	1.23E-03
31	GO:1900865: chloroplast RNA modification	1.43E-03
32	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.43E-03
33	GO:0010162: seed dormancy process	1.59E-03
34	GO:0016485: protein processing	1.75E-03
35	GO:0010582: floral meristem determinacy	1.91E-03
36	GO:0006626: protein targeting to mitochondrion	2.08E-03
37	GO:0046686: response to cadmium ion	2.14E-03
38	GO:0046688: response to copper ion	2.44E-03
39	GO:0000027: ribosomal large subunit assembly	2.81E-03
40	GO:0009944: polarity specification of adaxial/abaxial axis	2.81E-03
41	GO:0006825: copper ion transport	3.01E-03
42	GO:0051302: regulation of cell division	3.01E-03
43	GO:0006334: nucleosome assembly	3.20E-03
44	GO:0061077: chaperone-mediated protein folding	3.20E-03
45	GO:0007005: mitochondrion organization	3.41E-03
46	GO:0009617: response to bacterium	3.52E-03
47	GO:0009294: DNA mediated transformation	3.61E-03
48	GO:0010197: polar nucleus fusion	4.48E-03
49	GO:0009960: endosperm development	4.48E-03
50	GO:0009407: toxin catabolic process	8.60E-03
51	GO:0009853: photorespiration	9.47E-03
52	GO:0006099: tricarboxylic acid cycle	9.77E-03
53	GO:0000154: rRNA modification	1.23E-02
54	GO:0009636: response to toxic substance	1.23E-02
55	GO:0016569: covalent chromatin modification	1.72E-02
56	GO:0009553: embryo sac development	1.76E-02
57	GO:0009845: seed germination	2.23E-02
58	GO:0009790: embryo development	2.35E-02
59	GO:0009451: RNA modification	2.69E-02
60	GO:0042254: ribosome biogenesis	3.66E-02
61	GO:0080167: response to karrikin	4.21E-02
62	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.31E-02
63	GO:0046777: protein autophosphorylation	4.41E-02
64	GO:0006886: intracellular protein transport	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0004164: diphthine synthase activity	0.00E+00
3	GO:0050220: prostaglandin-E synthase activity	0.00E+00
4	GO:0043021: ribonucleoprotein complex binding	1.46E-07
5	GO:0005507: copper ion binding	7.78E-06
6	GO:0000166: nucleotide binding	4.15E-05
7	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	4.88E-05
8	GO:0001054: RNA polymerase I activity	5.27E-05
9	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.20E-04
10	GO:0003938: IMP dehydrogenase activity	1.20E-04
11	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.20E-04
12	GO:0048531: beta-1,3-galactosyltransferase activity	1.20E-04
13	GO:0016531: copper chaperone activity	2.06E-04
14	GO:0004148: dihydrolipoyl dehydrogenase activity	2.06E-04
15	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.80E-04
16	GO:0030976: thiamine pyrophosphate binding	6.29E-04
17	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.29E-04
18	GO:0004029: aldehyde dehydrogenase (NAD) activity	6.29E-04
19	GO:0050897: cobalt ion binding	6.67E-04
20	GO:0043295: glutathione binding	8.75E-04
21	GO:0008235: metalloexopeptidase activity	8.75E-04
22	GO:0030515: snoRNA binding	8.75E-04
23	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.23E-03
24	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.43E-03
25	GO:0001055: RNA polymerase II activity	1.43E-03
26	GO:0004177: aminopeptidase activity	1.75E-03
27	GO:0044183: protein binding involved in protein folding	1.75E-03
28	GO:0004129: cytochrome-c oxidase activity	1.75E-03
29	GO:0008378: galactosyltransferase activity	1.91E-03
30	GO:0001056: RNA polymerase III activity	1.91E-03
31	GO:0004407: histone deacetylase activity	2.81E-03
32	GO:0005528: FK506 binding	2.81E-03
33	GO:0008237: metallopeptidase activity	6.16E-03
34	GO:0003746: translation elongation factor activity	9.47E-03
35	GO:0003697: single-stranded DNA binding	9.47E-03
36	GO:0042393: histone binding	1.04E-02
37	GO:0004364: glutathione transferase activity	1.10E-02
38	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.26E-02
39	GO:0051082: unfolded protein binding	1.79E-02
40	GO:0015035: protein disulfide oxidoreductase activity	1.83E-02
41	GO:0016746: transferase activity, transferring acyl groups	1.83E-02
42	GO:0008026: ATP-dependent helicase activity	1.87E-02
43	GO:0030246: carbohydrate binding	1.99E-02
44	GO:0016758: transferase activity, transferring hexosyl groups	2.06E-02
45	GO:0008565: protein transporter activity	2.39E-02
46	GO:0003723: RNA binding	2.44E-02
47	GO:0008168: methyltransferase activity	3.52E-02
48	GO:0050660: flavin adenine dinucleotide binding	4.01E-02
49	GO:0008233: peptidase activity	4.16E-02

Rank	GO Term	Adjusted P value
1	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
2	GO:0005730: nucleolus	4.25E-08
3	GO:0070545: PeBoW complex	1.46E-07
4	GO:0005739: mitochondrion	1.13E-05
5	GO:0030687: preribosome, large subunit precursor	1.39E-05
6	GO:0005736: DNA-directed RNA polymerase I complex	2.98E-05
7	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	5.83E-05
8	GO:0005758: mitochondrial intermembrane space	1.20E-04
9	GO:0005834: heterotrimeric G-protein complex	1.27E-04
10	GO:0005746: mitochondrial respiratory chain	5.13E-04
11	GO:0031428: box C/D snoRNP complex	6.29E-04
12	GO:0005743: mitochondrial inner membrane	1.08E-03
13	GO:0005666: DNA-directed RNA polymerase III complex	1.43E-03
14	GO:0005747: mitochondrial respiratory chain complex I	1.49E-03
15	GO:0000418: DNA-directed RNA polymerase IV complex	1.59E-03
16	GO:0032040: small-subunit processome	1.91E-03
17	GO:0005665: DNA-directed RNA polymerase II, core complex	1.91E-03
18	GO:0045271: respiratory chain complex I	3.01E-03
19	GO:0005829: cytosol	6.79E-03
20	GO:0031966: mitochondrial membrane	1.33E-02
21	GO:0005773: vacuole	1.37E-02
22	GO:0009706: chloroplast inner membrane	1.79E-02
23	GO:0005654: nucleoplasm	2.06E-02
24	GO:0005623: cell	2.14E-02
25	GO:0005759: mitochondrial matrix	2.47E-02
26	GO:0000139: Golgi membrane	4.05E-02
27	GO:0022625: cytosolic large ribosomal subunit	4.36E-02