co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G01950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
2	GO:0006105: succinate metabolic process	0.00E+00
3	GO:0019484: beta-alanine catabolic process	0.00E+00
4	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
5	GO:0009399: nitrogen fixation	1.03E-05
6	GO:0046323: glucose import	7.88E-05
7	GO:0035266: meristem growth	1.56E-04
8	GO:0009450: gamma-aminobutyric acid catabolic process	1.56E-04
9	GO:0007292: female gamete generation	1.56E-04
10	GO:1990641: response to iron ion starvation	1.56E-04
11	GO:1902265: abscisic acid homeostasis	1.56E-04
12	GO:0071366: cellular response to indolebutyric acid stimulus	1.56E-04
13	GO:0009865: pollen tube adhesion	1.56E-04
14	GO:0006540: glutamate decarboxylation to succinate	1.56E-04
15	GO:0046167: glycerol-3-phosphate biosynthetic process	1.56E-04
16	GO:0048829: root cap development	2.46E-04
17	GO:0010311: lateral root formation	2.84E-04
18	GO:0006468: protein phosphorylation	2.95E-04
19	GO:0010033: response to organic substance	3.55E-04
20	GO:0006641: triglyceride metabolic process	3.55E-04
21	GO:0009727: detection of ethylene stimulus	3.55E-04
22	GO:0051788: response to misfolded protein	3.55E-04
23	GO:0006101: citrate metabolic process	3.55E-04
24	GO:0051258: protein polymerization	3.55E-04
25	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.55E-04
26	GO:2000693: positive regulation of seed maturation	3.55E-04
27	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	3.55E-04
28	GO:0006099: tricarboxylic acid cycle	3.86E-04
29	GO:0010030: positive regulation of seed germination	4.74E-04
30	GO:0000162: tryptophan biosynthetic process	5.28E-04
31	GO:0046686: response to cadmium ion	5.29E-04
32	GO:0006517: protein deglycosylation	5.82E-04
33	GO:0060968: regulation of gene silencing	5.82E-04
34	GO:0042344: indole glucosinolate catabolic process	5.82E-04
35	GO:0006954: inflammatory response	5.82E-04
36	GO:0006013: mannose metabolic process	5.82E-04
37	GO:0019563: glycerol catabolic process	5.82E-04
38	GO:0071398: cellular response to fatty acid	5.82E-04
39	GO:0035428: hexose transmembrane transport	7.69E-04
40	GO:0048194: Golgi vesicle budding	8.33E-04
41	GO:0006020: inositol metabolic process	8.33E-04
42	GO:0006072: glycerol-3-phosphate metabolic process	8.33E-04
43	GO:0015749: monosaccharide transport	8.33E-04
44	GO:0009113: purine nucleobase biosynthetic process	8.33E-04
45	GO:0006882: cellular zinc ion homeostasis	8.33E-04
46	GO:0019438: aromatic compound biosynthetic process	8.33E-04
47	GO:0071215: cellular response to abscisic acid stimulus	8.37E-04
48	GO:0009687: abscisic acid metabolic process	1.10E-03
49	GO:1902584: positive regulation of response to water deprivation	1.10E-03
50	GO:0006536: glutamate metabolic process	1.10E-03
51	GO:0042273: ribosomal large subunit biogenesis	1.10E-03
52	GO:0010600: regulation of auxin biosynthetic process	1.10E-03
53	GO:0010188: response to microbial phytotoxin	1.10E-03
54	GO:0006878: cellular copper ion homeostasis	1.10E-03
55	GO:0006542: glutamine biosynthetic process	1.10E-03
56	GO:0006646: phosphatidylethanolamine biosynthetic process	1.10E-03
57	GO:0048544: recognition of pollen	1.21E-03
58	GO:0008654: phospholipid biosynthetic process	1.30E-03
59	GO:0007029: endoplasmic reticulum organization	1.40E-03
60	GO:0043097: pyrimidine nucleoside salvage	1.40E-03
61	GO:0005513: detection of calcium ion	1.40E-03
62	GO:0015691: cadmium ion transport	1.72E-03
63	GO:0048827: phyllome development	1.72E-03
64	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.72E-03
65	GO:0048232: male gamete generation	1.72E-03
66	GO:0043248: proteasome assembly	1.72E-03
67	GO:0042732: D-xylose metabolic process	1.72E-03
68	GO:0006206: pyrimidine nucleobase metabolic process	1.72E-03
69	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.72E-03
70	GO:0051607: defense response to virus	1.88E-03
71	GO:0001666: response to hypoxia	1.99E-03
72	GO:0009612: response to mechanical stimulus	2.06E-03
73	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.42E-03
74	GO:0070370: cellular heat acclimation	2.42E-03
75	GO:0009396: folic acid-containing compound biosynthetic process	2.42E-03
76	GO:0006102: isocitrate metabolic process	2.80E-03
77	GO:0016559: peroxisome fission	2.80E-03
78	GO:0006644: phospholipid metabolic process	2.80E-03
79	GO:0009819: drought recovery	2.80E-03
80	GO:0006491: N-glycan processing	2.80E-03
81	GO:0006605: protein targeting	2.80E-03
82	GO:0010078: maintenance of root meristem identity	2.80E-03
83	GO:0009617: response to bacterium	2.82E-03
84	GO:0006499: N-terminal protein myristoylation	2.85E-03
85	GO:0006811: ion transport	2.85E-03
86	GO:0010262: somatic embryogenesis	3.21E-03
87	GO:0045087: innate immune response	3.27E-03
88	GO:0009737: response to abscisic acid	3.58E-03
89	GO:0009051: pentose-phosphate shunt, oxidative branch	3.63E-03
90	GO:0006098: pentose-phosphate shunt	3.63E-03
91	GO:0046916: cellular transition metal ion homeostasis	3.63E-03
92	GO:0035999: tetrahydrofolate interconversion	4.06E-03
93	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.06E-03
94	GO:0007064: mitotic sister chromatid cohesion	4.52E-03
95	GO:0006535: cysteine biosynthetic process from serine	4.52E-03
96	GO:0010015: root morphogenesis	4.99E-03
97	GO:0052544: defense response by callose deposition in cell wall	4.99E-03
98	GO:0030148: sphingolipid biosynthetic process	4.99E-03
99	GO:0006807: nitrogen compound metabolic process	5.98E-03
100	GO:0006006: glucose metabolic process	5.98E-03
101	GO:0034605: cellular response to heat	6.50E-03
102	GO:0006541: glutamine metabolic process	6.50E-03
103	GO:0002237: response to molecule of bacterial origin	6.50E-03
104	GO:0009933: meristem structural organization	6.50E-03
105	GO:0048367: shoot system development	6.91E-03
106	GO:0009969: xyloglucan biosynthetic process	7.04E-03
107	GO:0007031: peroxisome organization	7.04E-03
108	GO:0010167: response to nitrate	7.04E-03
109	GO:0005985: sucrose metabolic process	7.04E-03
110	GO:0071732: cellular response to nitric oxide	7.04E-03
111	GO:0090351: seedling development	7.04E-03
112	GO:0009626: plant-type hypersensitive response	7.13E-03
113	GO:0006487: protein N-linked glycosylation	8.16E-03
114	GO:0019344: cysteine biosynthetic process	8.16E-03
115	GO:0009651: response to salt stress	8.69E-03
116	GO:0048364: root development	8.93E-03
117	GO:0031408: oxylipin biosynthetic process	9.34E-03
118	GO:0071456: cellular response to hypoxia	9.96E-03
119	GO:0030433: ubiquitin-dependent ERAD pathway	9.96E-03
120	GO:0031348: negative regulation of defense response	9.96E-03
121	GO:0009693: ethylene biosynthetic process	1.06E-02
122	GO:0042742: defense response to bacterium	1.19E-02
123	GO:0015991: ATP hydrolysis coupled proton transport	1.25E-02
124	GO:0042631: cellular response to water deprivation	1.25E-02
125	GO:0042391: regulation of membrane potential	1.25E-02
126	GO:0080022: primary root development	1.25E-02
127	GO:0006885: regulation of pH	1.32E-02
128	GO:0006520: cellular amino acid metabolic process	1.32E-02
129	GO:0010154: fruit development	1.32E-02
130	GO:0009646: response to absence of light	1.39E-02
131	GO:0010150: leaf senescence	1.40E-02
132	GO:0009851: auxin biosynthetic process	1.46E-02
133	GO:0010183: pollen tube guidance	1.46E-02
134	GO:0009749: response to glucose	1.46E-02
135	GO:0016310: phosphorylation	1.50E-02
136	GO:0006635: fatty acid beta-oxidation	1.54E-02
137	GO:0010583: response to cyclopentenone	1.61E-02
138	GO:0071281: cellular response to iron ion	1.68E-02
139	GO:0009567: double fertilization forming a zygote and endosperm	1.76E-02
140	GO:0006914: autophagy	1.76E-02
141	GO:0010286: heat acclimation	1.84E-02
142	GO:0035556: intracellular signal transduction	1.88E-02
143	GO:0009627: systemic acquired resistance	2.16E-02
144	GO:0042128: nitrate assimilation	2.16E-02
145	GO:0048573: photoperiodism, flowering	2.24E-02
146	GO:0006950: response to stress	2.24E-02
147	GO:0009817: defense response to fungus, incompatible interaction	2.41E-02
148	GO:0008219: cell death	2.41E-02
149	GO:0010043: response to zinc ion	2.67E-02
150	GO:0080167: response to karrikin	2.69E-02
151	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.78E-02
152	GO:0046777: protein autophosphorylation	2.87E-02
153	GO:0030001: metal ion transport	3.13E-02
154	GO:0051707: response to other organism	3.42E-02
155	GO:0007165: signal transduction	3.53E-02
156	GO:0009965: leaf morphogenesis	3.71E-02
157	GO:0006855: drug transmembrane transport	3.81E-02
158	GO:0031347: regulation of defense response	3.91E-02
159	GO:0042538: hyperosmotic salinity response	4.01E-02
160	GO:0006812: cation transport	4.01E-02
161	GO:0006813: potassium ion transport	4.22E-02
162	GO:0006979: response to oxidative stress	4.26E-02
163	GO:0006857: oligopeptide transport	4.43E-02
164	GO:0006417: regulation of translation	4.54E-02
165	GO:0048316: seed development	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity	0.00E+00
2	GO:0009045: xylose isomerase activity	0.00E+00
3	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
4	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
5	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
6	GO:0004370: glycerol kinase activity	0.00E+00
7	GO:0005524: ATP binding	1.48E-06
8	GO:0015144: carbohydrate transmembrane transporter activity	2.70E-05
9	GO:0004356: glutamate-ammonia ligase activity	3.14E-05
10	GO:0005351: sugar:proton symporter activity	3.57E-05
11	GO:0004012: phospholipid-translocating ATPase activity	6.56E-05
12	GO:0005507: copper ion binding	7.29E-05
13	GO:0009679: hexose:proton symporter activity	1.56E-04
14	GO:0046870: cadmium ion binding	1.56E-04
15	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.56E-04
16	GO:0003867: 4-aminobutyrate transaminase activity	1.56E-04
17	GO:0050200: plasmalogen synthase activity	1.56E-04
18	GO:0016274: protein-arginine N-methyltransferase activity	1.56E-04
19	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.56E-04
20	GO:0004609: phosphatidylserine decarboxylase activity	3.55E-04
21	GO:0003994: aconitate hydratase activity	3.55E-04
22	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	3.55E-04
23	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	3.55E-04
24	GO:0004839: ubiquitin activating enzyme activity	3.55E-04
25	GO:0045140: inositol phosphoceramide synthase activity	3.55E-04
26	GO:0004352: glutamate dehydrogenase (NAD+) activity	3.55E-04
27	GO:0004329: formate-tetrahydrofolate ligase activity	3.55E-04
28	GO:0019200: carbohydrate kinase activity	3.55E-04
29	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	3.55E-04
30	GO:0032791: lead ion binding	3.55E-04
31	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.74E-04
32	GO:0004049: anthranilate synthase activity	5.82E-04
33	GO:0005047: signal recognition particle binding	5.82E-04
34	GO:0004383: guanylate cyclase activity	5.82E-04
35	GO:0001653: peptide receptor activity	8.33E-04
36	GO:0048027: mRNA 5'-UTR binding	8.33E-04
37	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	8.33E-04
38	GO:0015086: cadmium ion transmembrane transporter activity	8.33E-04
39	GO:0004108: citrate (Si)-synthase activity	8.33E-04
40	GO:0004834: tryptophan synthase activity	1.10E-03
41	GO:0004737: pyruvate decarboxylase activity	1.10E-03
42	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.10E-03
43	GO:0043015: gamma-tubulin binding	1.10E-03
44	GO:0004576: oligosaccharyl transferase activity	1.10E-03
45	GO:0016301: kinase activity	1.21E-03
46	GO:0005355: glucose transmembrane transporter activity	1.21E-03
47	GO:0010294: abscisic acid glucosyltransferase activity	1.40E-03
48	GO:0015145: monosaccharide transmembrane transporter activity	1.40E-03
49	GO:0008641: small protein activating enzyme activity	1.40E-03
50	GO:0004672: protein kinase activity	1.71E-03
51	GO:0030976: thiamine pyrophosphate binding	1.72E-03
52	GO:0000293: ferric-chelate reductase activity	1.72E-03
53	GO:0036402: proteasome-activating ATPase activity	1.72E-03
54	GO:0004124: cysteine synthase activity	2.06E-03
55	GO:0070300: phosphatidic acid binding	2.06E-03
56	GO:0004849: uridine kinase activity	2.06E-03
57	GO:0004559: alpha-mannosidase activity	2.06E-03
58	GO:0004674: protein serine/threonine kinase activity	2.24E-03
59	GO:0016831: carboxy-lyase activity	2.42E-03
60	GO:0008143: poly(A) binding	2.42E-03
61	GO:0004620: phospholipase activity	2.42E-03
62	GO:0005337: nucleoside transmembrane transporter activity	2.80E-03
63	GO:0004525: ribonuclease III activity	2.80E-03
64	GO:0050897: cobalt ion binding	2.99E-03
65	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.06E-03
66	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.63E-03
67	GO:0000287: magnesium ion binding	3.83E-03
68	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.06E-03
69	GO:0008171: O-methyltransferase activity	4.52E-03
70	GO:0004713: protein tyrosine kinase activity	4.52E-03
71	GO:0047372: acylglycerol lipase activity	4.99E-03
72	GO:0030246: carbohydrate binding	6.40E-03
73	GO:0045735: nutrient reservoir activity	6.69E-03
74	GO:0030552: cAMP binding	7.04E-03
75	GO:0030553: cGMP binding	7.04E-03
76	GO:0017025: TBP-class protein binding	7.04E-03
77	GO:0005516: calmodulin binding	7.58E-03
78	GO:0031418: L-ascorbic acid binding	8.16E-03
79	GO:0043130: ubiquitin binding	8.16E-03
80	GO:0016746: transferase activity, transferring acyl groups	8.30E-03
81	GO:0043424: protein histidine kinase binding	8.74E-03
82	GO:0005216: ion channel activity	8.74E-03
83	GO:0030170: pyridoxal phosphate binding	1.12E-02
84	GO:0005249: voltage-gated potassium channel activity	1.25E-02
85	GO:0030551: cyclic nucleotide binding	1.25E-02
86	GO:0005451: monovalent cation:proton antiporter activity	1.25E-02
87	GO:0015299: solute:proton antiporter activity	1.39E-02
88	GO:0016887: ATPase activity	1.48E-02
89	GO:0005515: protein binding	1.65E-02
90	GO:0015385: sodium:proton antiporter activity	1.68E-02
91	GO:0016791: phosphatase activity	1.76E-02
92	GO:0042802: identical protein binding	1.78E-02
93	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.16E-02
94	GO:0004721: phosphoprotein phosphatase activity	2.24E-02
95	GO:0030247: polysaccharide binding	2.24E-02
96	GO:0004683: calmodulin-dependent protein kinase activity	2.24E-02
97	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.32E-02
98	GO:0005096: GTPase activator activity	2.50E-02
99	GO:0030145: manganese ion binding	2.67E-02
100	GO:0008422: beta-glucosidase activity	3.04E-02
101	GO:0050661: NADP binding	3.13E-02
102	GO:0051539: 4 iron, 4 sulfur cluster binding	3.13E-02
103	GO:0043621: protein self-association	3.61E-02
104	GO:0005509: calcium ion binding	3.82E-02
105	GO:0016298: lipase activity	4.33E-02
106	GO:0015171: amino acid transmembrane transporter activity	4.54E-02
107	GO:0031625: ubiquitin protein ligase binding	4.54E-02
108	GO:0005215: transporter activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0016021: integral component of membrane	9.98E-07
3	GO:0005886: plasma membrane	1.21E-06
4	GO:0045252: oxoglutarate dehydrogenase complex	1.56E-04
5	GO:0005950: anthranilate synthase complex	3.55E-04
6	GO:0016602: CCAAT-binding factor complex	3.74E-04
7	GO:0005829: cytosol	7.03E-04
8	GO:0016020: membrane	1.03E-03
9	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.10E-03
10	GO:0009506: plasmodesma	1.49E-03
11	GO:0005783: endoplasmic reticulum	1.85E-03
12	GO:0031597: cytosolic proteasome complex	2.06E-03
13	GO:0005802: trans-Golgi network	2.08E-03
14	GO:0031595: nuclear proteasome complex	2.42E-03
15	GO:0030687: preribosome, large subunit precursor	2.42E-03
16	GO:0005774: vacuolar membrane	3.04E-03
17	GO:0005779: integral component of peroxisomal membrane	3.21E-03
18	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.21E-03
19	GO:0005794: Golgi apparatus	3.62E-03
20	GO:0010494: cytoplasmic stress granule	3.63E-03
21	GO:0008540: proteasome regulatory particle, base subcomplex	4.06E-03
22	GO:0005737: cytoplasm	7.72E-03
23	GO:0009705: plant-type vacuole membrane	1.40E-02
24	GO:0031965: nuclear membrane	1.46E-02
25	GO:0005778: peroxisomal membrane	1.84E-02
26	GO:0005777: peroxisome	2.09E-02
27	GO:0005773: vacuole	2.10E-02
28	GO:0005789: endoplasmic reticulum membrane	2.24E-02
29	GO:0031902: late endosome membrane	3.22E-02
30	GO:0005768: endosome	3.71E-02
31	GO:0031966: mitochondrial membrane	4.01E-02
32	GO:0000502: proteasome complex	4.22E-02
33	GO:0010008: endosome membrane	4.86E-02