Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G39870

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006480: N-terminal protein amino acid methylation0.00E+00
2GO:0051928: positive regulation of calcium ion transport0.00E+00
3GO:0043171: peptide catabolic process0.00E+00
4GO:1990641: response to iron ion starvation1.10E-04
5GO:0006101: citrate metabolic process2.57E-04
6GO:0034976: response to endoplasmic reticulum stress3.29E-04
7GO:0090630: activation of GTPase activity4.25E-04
8GO:0042344: indole glucosinolate catabolic process4.25E-04
9GO:1901332: negative regulation of lateral root development6.10E-04
10GO:0015749: monosaccharide transport6.10E-04
11GO:0006646: phosphatidylethanolamine biosynthetic process8.10E-04
12GO:0010222: stem vascular tissue pattern formation8.10E-04
13GO:0010286: heat acclimation1.12E-03
14GO:0001666: response to hypoxia1.25E-03
15GO:0042732: D-xylose metabolic process1.25E-03
16GO:0000741: karyogamy1.25E-03
17GO:0009817: defense response to fungus, incompatible interaction1.61E-03
18GO:0006333: chromatin assembly or disassembly1.75E-03
19GO:0010044: response to aluminum ion1.75E-03
20GO:0006102: isocitrate metabolic process2.03E-03
21GO:0009061: anaerobic respiration2.03E-03
22GO:0001510: RNA methylation2.32E-03
23GO:0046916: cellular transition metal ion homeostasis2.62E-03
24GO:0006098: pentose-phosphate shunt2.62E-03
25GO:0045454: cell redox homeostasis3.51E-03
26GO:0009682: induced systemic resistance3.59E-03
27GO:0052544: defense response by callose deposition in cell wall3.59E-03
28GO:0016925: protein sumoylation3.93E-03
29GO:2000012: regulation of auxin polar transport4.30E-03
30GO:0019853: L-ascorbic acid biosynthetic process5.04E-03
31GO:2000377: regulation of reactive oxygen species metabolic process5.84E-03
32GO:0009695: jasmonic acid biosynthetic process6.25E-03
33GO:0010227: floral organ abscission7.55E-03
34GO:0006012: galactose metabolic process7.55E-03
35GO:0080022: primary root development8.93E-03
36GO:0010197: polar nucleus fusion9.41E-03
37GO:0010182: sugar mediated signaling pathway9.41E-03
38GO:0046323: glucose import9.41E-03
39GO:0008360: regulation of cell shape9.41E-03
40GO:0048544: recognition of pollen9.91E-03
41GO:0035556: intracellular signal transduction1.01E-02
42GO:0009617: response to bacterium1.03E-02
43GO:0008654: phospholipid biosynthetic process1.04E-02
44GO:0006635: fatty acid beta-oxidation1.09E-02
45GO:0071281: cellular response to iron ion1.20E-02
46GO:0019760: glucosinolate metabolic process1.25E-02
47GO:0009911: positive regulation of flower development1.42E-02
48GO:0048573: photoperiodism, flowering1.59E-02
49GO:0006950: response to stress1.59E-02
50GO:0048481: plant ovule development1.71E-02
51GO:0007165: signal transduction1.72E-02
52GO:0010043: response to zinc ion1.89E-02
53GO:0006099: tricarboxylic acid cycle2.09E-02
54GO:0030001: metal ion transport2.22E-02
55GO:0006897: endocytosis2.29E-02
56GO:0009926: auxin polar transport2.42E-02
57GO:0008643: carbohydrate transport2.56E-02
58GO:0006855: drug transmembrane transport2.70E-02
59GO:0000165: MAPK cascade2.77E-02
60GO:0051603: proteolysis involved in cellular protein catabolic process3.07E-02
61GO:0006857: oligopeptide transport3.14E-02
62GO:0009909: regulation of flower development3.22E-02
63GO:0009651: response to salt stress3.48E-02
64GO:0009620: response to fungus3.61E-02
65GO:0018105: peptidyl-serine phosphorylation3.93E-02
66GO:0006396: RNA processing3.93E-02
67GO:0009845: seed germination4.77E-02
RankGO TermAdjusted P value
1GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
2GO:0016428: tRNA (cytosine-5-)-methyltransferase activity0.00E+00
3GO:0010349: L-galactose dehydrogenase activity0.00E+00
4GO:0009045: xylose isomerase activity0.00E+00
5GO:0070006: metalloaminopeptidase activity1.10E-04
6GO:0019707: protein-cysteine S-acyltransferase activity1.10E-04
7GO:0030275: LRR domain binding1.10E-04
8GO:0009679: hexose:proton symporter activity1.10E-04
9GO:0010013: N-1-naphthylphthalamic acid binding1.10E-04
10GO:0008692: 3-hydroxybutyryl-CoA epimerase activity1.10E-04
11GO:0046870: cadmium ion binding1.10E-04
12GO:0004177: aminopeptidase activity1.73E-04
13GO:0032791: lead ion binding2.57E-04
14GO:0004609: phosphatidylserine decarboxylase activity2.57E-04
15GO:0003994: aconitate hydratase activity2.57E-04
16GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity2.57E-04
17GO:0019948: SUMO activating enzyme activity4.25E-04
18GO:0017150: tRNA dihydrouridine synthase activity4.25E-04
19GO:0003756: protein disulfide isomerase activity5.72E-04
20GO:0030527: structural constituent of chromatin6.10E-04
21GO:0004165: dodecenoyl-CoA delta-isomerase activity6.10E-04
22GO:0004300: enoyl-CoA hydratase activity6.10E-04
23GO:0048027: mRNA 5'-UTR binding6.10E-04
24GO:0042277: peptide binding8.10E-04
25GO:0004737: pyruvate decarboxylase activity8.10E-04
26GO:0045300: acyl-[acyl-carrier-protein] desaturase activity1.02E-03
27GO:0015145: monosaccharide transmembrane transporter activity1.02E-03
28GO:0019137: thioglucosidase activity1.25E-03
29GO:0004029: aldehyde dehydrogenase (NAD) activity1.25E-03
30GO:0030976: thiamine pyrophosphate binding1.25E-03
31GO:0070300: phosphatidic acid binding1.49E-03
32GO:0016831: carboxy-lyase activity1.75E-03
33GO:0004525: ribonuclease III activity2.03E-03
34GO:0004033: aldo-keto reductase (NADP) activity2.03E-03
35GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity2.62E-03
36GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity2.93E-03
37GO:0000976: transcription regulatory region sequence-specific DNA binding3.93E-03
38GO:0008081: phosphoric diester hydrolase activity4.30E-03
39GO:0004707: MAP kinase activity6.67E-03
40GO:0015144: carbohydrate transmembrane transporter activity7.45E-03
41GO:0015297: antiporter activity8.20E-03
42GO:0005351: sugar:proton symporter activity8.40E-03
43GO:0016301: kinase activity1.25E-02
44GO:0004004: ATP-dependent RNA helicase activity1.59E-02
45GO:0102483: scopolin beta-glucosidase activity1.59E-02
46GO:0005096: GTPase activator activity1.77E-02
47GO:0015238: drug transmembrane transporter activity1.77E-02
48GO:0050897: cobalt ion binding1.89E-02
49GO:0008422: beta-glucosidase activity2.15E-02
50GO:0051539: 4 iron, 4 sulfur cluster binding2.22E-02
51GO:0035091: phosphatidylinositol binding2.56E-02
52GO:0005215: transporter activity2.62E-02
53GO:0031625: ubiquitin protein ligase binding3.22E-02
54GO:0046872: metal ion binding3.28E-02
55GO:0008289: lipid binding3.40E-02
56GO:0004842: ubiquitin-protein transferase activity3.46E-02
57GO:0016874: ligase activity3.69E-02
58GO:0022857: transmembrane transporter activity3.69E-02
RankGO TermAdjusted P value
1GO:0032777: Piccolo NuA4 histone acetyltransferase complex2.57E-04
2GO:0005783: endoplasmic reticulum1.58E-03
3GO:0005886: plasma membrane1.87E-03
4GO:0030131: clathrin adaptor complex2.03E-03
5GO:0005777: peroxisome2.40E-03
6GO:0005829: cytosol2.46E-03
7GO:0031090: organelle membrane2.62E-03
8GO:0030125: clathrin vesicle coat3.25E-03
9GO:0005905: clathrin-coated pit6.67E-03
10GO:0005773: vacuole8.18E-03
11GO:0031965: nuclear membrane1.04E-02
12GO:0000785: chromatin1.14E-02
13GO:0016021: integral component of membrane1.31E-02
14GO:0000151: ubiquitin ligase complex1.71E-02
15GO:0009506: plasmodesma1.86E-02
16GO:0016020: membrane1.90E-02
17GO:0000786: nucleosome1.96E-02
Gene type



Gene DE type