Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G39370

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048867: stem cell fate determination0.00E+00
2GO:1902185: positive regulation of shoot apical meristem development0.00E+00
3GO:0051028: mRNA transport9.15E-06
4GO:0071217: cellular response to external biotic stimulus1.49E-05
5GO:0046898: response to cycloheximide1.49E-05
6GO:0010272: response to silver ion2.75E-05
7GO:0045836: positive regulation of meiotic nuclear division2.75E-05
8GO:0019048: modulation by virus of host morphology or physiology4.27E-05
9GO:0006417: regulation of translation8.91E-05
10GO:0033962: cytoplasmic mRNA processing body assembly1.22E-04
11GO:0006875: cellular metal ion homeostasis1.70E-04
12GO:0009932: cell tip growth1.96E-04
13GO:0048507: meristem development2.22E-04
14GO:0010152: pollen maturation3.35E-04
15GO:0048467: gynoecium development3.96E-04
16GO:0006874: cellular calcium ion homeostasis5.23E-04
17GO:0010073: meristem maintenance5.23E-04
18GO:0051321: meiotic cell cycle5.55E-04
19GO:0006397: mRNA processing6.18E-04
20GO:0010501: RNA secondary structure unwinding7.29E-04
21GO:0009960: endosperm development7.65E-04
22GO:0016032: viral process9.12E-04
23GO:0009639: response to red or far red light9.89E-04
24GO:0071805: potassium ion transmembrane transport1.03E-03
25GO:0016579: protein deubiquitination1.07E-03
26GO:0009911: positive regulation of flower development1.11E-03
27GO:0001666: response to hypoxia1.11E-03
28GO:0006974: cellular response to DNA damage stimulus1.19E-03
29GO:0006888: ER to Golgi vesicle-mediated transport1.23E-03
30GO:0048481: plant ovule development1.31E-03
31GO:0006511: ubiquitin-dependent protein catabolic process1.36E-03
32GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.06E-03
33GO:0009846: pollen germination2.11E-03
34GO:0006813: potassium ion transport2.21E-03
35GO:0009909: regulation of flower development2.37E-03
36GO:0009620: response to fungus2.64E-03
37GO:0009624: response to nematode2.80E-03
38GO:0009742: brassinosteroid mediated signaling pathway2.92E-03
39GO:0009790: embryo development3.63E-03
40GO:0016036: cellular response to phosphate starvation3.87E-03
41GO:0009617: response to bacterium4.58E-03
42GO:0009826: unidimensional cell growth5.34E-03
43GO:0006979: response to oxidative stress2.07E-02
44GO:0030154: cell differentiation2.19E-02
45GO:0009733: response to auxin2.24E-02
46GO:0007275: multicellular organism development3.34E-02
47GO:0007165: signal transduction3.48E-02
48GO:0009793: embryo development ending in seed dormancy3.75E-02
49GO:0006355: regulation of transcription, DNA-templated4.89E-02
RankGO TermAdjusted P value
1GO:0060090: binding, bridging0.00E+00
2GO:0003729: mRNA binding5.22E-07
3GO:0019829: cation-transporting ATPase activity2.75E-05
4GO:0003730: mRNA 3'-UTR binding1.22E-04
5GO:0008026: ATP-dependent helicase activity1.25E-04
6GO:0005388: calcium-transporting ATPase activity3.65E-04
7GO:0019888: protein phosphatase regulator activity3.65E-04
8GO:0003712: transcription cofactor activity4.26E-04
9GO:0015079: potassium ion transmembrane transporter activity5.23E-04
10GO:0036459: thiol-dependent ubiquitinyl hydrolase activity5.55E-04
11GO:0004843: thiol-dependent ubiquitin-specific protease activity8.75E-04
12GO:0004004: ATP-dependent RNA helicase activity1.23E-03
13GO:0005198: structural molecule activity1.96E-03
14GO:0031625: ubiquitin protein ligase binding2.37E-03
15GO:0004386: helicase activity2.97E-03
16GO:0046982: protein heterodimerization activity5.41E-03
17GO:0061630: ubiquitin protein ligase activity6.58E-03
18GO:0005524: ATP binding1.28E-02
19GO:0003723: RNA binding1.55E-02
20GO:0005215: transporter activity2.21E-02
21GO:0004842: ubiquitin-protein transferase activity2.59E-02
22GO:0003677: DNA binding3.46E-02
RankGO TermAdjusted P value
1GO:0031461: cullin-RING ubiquitin ligase complex4.27E-05
2GO:0030126: COPI vesicle coat7.90E-05
3GO:0010494: cytoplasmic stress granule2.22E-04
4GO:0000159: protein phosphatase type 2A complex3.06E-04
5GO:0000932: P-body1.11E-03
6GO:0000151: ubiquitin ligase complex1.31E-03
7GO:0005829: cytosol1.64E-03
8GO:0005654: nucleoplasm3.21E-03
9GO:0080008: Cul4-RING E3 ubiquitin ligase complex5.84E-03
10GO:0005887: integral component of plasma membrane1.03E-02
11GO:0005777: peroxisome1.38E-02
12GO:0000139: Golgi membrane2.56E-02
13GO:0005789: endoplasmic reticulum membrane2.79E-02
14GO:0005774: vacuolar membrane5.00E-02
Gene type



Gene DE type