GO Enrichment Analysis of Co-expressed Genes with
AT4G39260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 2 | GO:0043171: peptide catabolic process | 0.00E+00 |
| 3 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 4 | GO:0010378: temperature compensation of the circadian clock | 0.00E+00 |
| 5 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 6 | GO:0015015: heparan sulfate proteoglycan biosynthetic process, enzymatic modification | 0.00E+00 |
| 7 | GO:0007623: circadian rhythm | 3.60E-05 |
| 8 | GO:0032508: DNA duplex unwinding | 1.11E-04 |
| 9 | GO:0034472: snRNA 3'-end processing | 1.54E-04 |
| 10 | GO:0010496: intercellular transport | 1.54E-04 |
| 11 | GO:1990641: response to iron ion starvation | 1.54E-04 |
| 12 | GO:1902265: abscisic acid homeostasis | 1.54E-04 |
| 13 | GO:0015812: gamma-aminobutyric acid transport | 1.54E-04 |
| 14 | GO:0032958: inositol phosphate biosynthetic process | 1.54E-04 |
| 15 | GO:0006611: protein export from nucleus | 3.51E-04 |
| 16 | GO:0090057: root radial pattern formation | 3.51E-04 |
| 17 | GO:0051170: nuclear import | 3.51E-04 |
| 18 | GO:0030259: lipid glycosylation | 3.51E-04 |
| 19 | GO:0006101: citrate metabolic process | 3.51E-04 |
| 20 | GO:0009409: response to cold | 3.67E-04 |
| 21 | GO:0042542: response to hydrogen peroxide | 4.68E-04 |
| 22 | GO:0000055: ribosomal large subunit export from nucleus | 5.75E-04 |
| 23 | GO:0010366: negative regulation of ethylene biosynthetic process | 5.75E-04 |
| 24 | GO:0042256: mature ribosome assembly | 5.75E-04 |
| 25 | GO:0042344: indole glucosinolate catabolic process | 5.75E-04 |
| 26 | GO:0006970: response to osmotic stress | 7.48E-04 |
| 27 | GO:0006020: inositol metabolic process | 8.23E-04 |
| 28 | GO:0010601: positive regulation of auxin biosynthetic process | 8.23E-04 |
| 29 | GO:0015749: monosaccharide transport | 8.23E-04 |
| 30 | GO:0055070: copper ion homeostasis | 8.23E-04 |
| 31 | GO:0009737: response to abscisic acid | 1.01E-03 |
| 32 | GO:0006646: phosphatidylethanolamine biosynthetic process | 1.09E-03 |
| 33 | GO:0009687: abscisic acid metabolic process | 1.09E-03 |
| 34 | GO:0015743: malate transport | 1.09E-03 |
| 35 | GO:1903830: magnesium ion transmembrane transport | 1.09E-03 |
| 36 | GO:0007029: endoplasmic reticulum organization | 1.38E-03 |
| 37 | GO:0000380: alternative mRNA splicing, via spliceosome | 1.38E-03 |
| 38 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 1.38E-03 |
| 39 | GO:0043097: pyrimidine nucleoside salvage | 1.38E-03 |
| 40 | GO:0006206: pyrimidine nucleobase metabolic process | 1.70E-03 |
| 41 | GO:0009861: jasmonic acid and ethylene-dependent systemic resistance | 2.03E-03 |
| 42 | GO:0048573: photoperiodism, flowering | 2.30E-03 |
| 43 | GO:0006950: response to stress | 2.30E-03 |
| 44 | GO:0048437: floral organ development | 2.39E-03 |
| 45 | GO:0015693: magnesium ion transport | 2.39E-03 |
| 46 | GO:0009817: defense response to fungus, incompatible interaction | 2.54E-03 |
| 47 | GO:0009651: response to salt stress | 2.72E-03 |
| 48 | GO:0010468: regulation of gene expression | 2.76E-03 |
| 49 | GO:0006102: isocitrate metabolic process | 2.77E-03 |
| 50 | GO:0009061: anaerobic respiration | 2.77E-03 |
| 51 | GO:0019827: stem cell population maintenance | 2.77E-03 |
| 52 | GO:0009819: drought recovery | 2.77E-03 |
| 53 | GO:0009415: response to water | 2.77E-03 |
| 54 | GO:0010218: response to far red light | 2.80E-03 |
| 55 | GO:0009414: response to water deprivation | 2.91E-03 |
| 56 | GO:0009631: cold acclimation | 2.93E-03 |
| 57 | GO:0010119: regulation of stomatal movement | 2.93E-03 |
| 58 | GO:0009827: plant-type cell wall modification | 3.16E-03 |
| 59 | GO:0001510: RNA methylation | 3.16E-03 |
| 60 | GO:0009637: response to blue light | 3.21E-03 |
| 61 | GO:0045087: innate immune response | 3.21E-03 |
| 62 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 3.58E-03 |
| 63 | GO:0046916: cellular transition metal ion homeostasis | 3.58E-03 |
| 64 | GO:0030001: metal ion transport | 3.66E-03 |
| 65 | GO:0005982: starch metabolic process | 4.01E-03 |
| 66 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.01E-03 |
| 67 | GO:0008202: steroid metabolic process | 4.01E-03 |
| 68 | GO:0035556: intracellular signal transduction | 4.30E-03 |
| 69 | GO:0009970: cellular response to sulfate starvation | 4.46E-03 |
| 70 | GO:0006995: cellular response to nitrogen starvation | 4.46E-03 |
| 71 | GO:0008643: carbohydrate transport | 4.47E-03 |
| 72 | GO:0009682: induced systemic resistance | 4.92E-03 |
| 73 | GO:0052544: defense response by callose deposition in cell wall | 4.92E-03 |
| 74 | GO:0016925: protein sumoylation | 5.41E-03 |
| 75 | GO:0010588: cotyledon vascular tissue pattern formation | 5.91E-03 |
| 76 | GO:2000012: regulation of auxin polar transport | 5.91E-03 |
| 77 | GO:0010102: lateral root morphogenesis | 5.91E-03 |
| 78 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 5.91E-03 |
| 79 | GO:0019853: L-ascorbic acid biosynthetic process | 6.95E-03 |
| 80 | GO:0010030: positive regulation of seed germination | 6.95E-03 |
| 81 | GO:0006406: mRNA export from nucleus | 8.05E-03 |
| 82 | GO:0006825: copper ion transport | 8.63E-03 |
| 83 | GO:0009695: jasmonic acid biosynthetic process | 8.63E-03 |
| 84 | GO:0048511: rhythmic process | 9.22E-03 |
| 85 | GO:0061077: chaperone-mediated protein folding | 9.22E-03 |
| 86 | GO:0003333: amino acid transmembrane transport | 9.22E-03 |
| 87 | GO:0019748: secondary metabolic process | 9.82E-03 |
| 88 | GO:0006012: galactose metabolic process | 1.04E-02 |
| 89 | GO:0071215: cellular response to abscisic acid stimulus | 1.04E-02 |
| 90 | GO:0010082: regulation of root meristem growth | 1.04E-02 |
| 91 | GO:0009845: seed germination | 1.07E-02 |
| 92 | GO:0007165: signal transduction | 1.09E-02 |
| 93 | GO:0010214: seed coat development | 1.11E-02 |
| 94 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.17E-02 |
| 95 | GO:0042631: cellular response to water deprivation | 1.24E-02 |
| 96 | GO:0042391: regulation of membrane potential | 1.24E-02 |
| 97 | GO:0080022: primary root development | 1.24E-02 |
| 98 | GO:0010501: RNA secondary structure unwinding | 1.24E-02 |
| 99 | GO:0000413: protein peptidyl-prolyl isomerization | 1.24E-02 |
| 100 | GO:0010051: xylem and phloem pattern formation | 1.24E-02 |
| 101 | GO:0046323: glucose import | 1.31E-02 |
| 102 | GO:0010305: leaf vascular tissue pattern formation | 1.31E-02 |
| 103 | GO:0042752: regulation of circadian rhythm | 1.37E-02 |
| 104 | GO:0048544: recognition of pollen | 1.37E-02 |
| 105 | GO:0009556: microsporogenesis | 1.44E-02 |
| 106 | GO:0008654: phospholipid biosynthetic process | 1.44E-02 |
| 107 | GO:0009908: flower development | 1.51E-02 |
| 108 | GO:0006635: fatty acid beta-oxidation | 1.52E-02 |
| 109 | GO:0009738: abscisic acid-activated signaling pathway | 1.64E-02 |
| 110 | GO:0009617: response to bacterium | 1.64E-02 |
| 111 | GO:1901657: glycosyl compound metabolic process | 1.66E-02 |
| 112 | GO:0016125: sterol metabolic process | 1.74E-02 |
| 113 | GO:0019760: glucosinolate metabolic process | 1.74E-02 |
| 114 | GO:0010286: heat acclimation | 1.81E-02 |
| 115 | GO:0016126: sterol biosynthetic process | 1.97E-02 |
| 116 | GO:0009911: positive regulation of flower development | 1.97E-02 |
| 117 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.05E-02 |
| 118 | GO:0010029: regulation of seed germination | 2.05E-02 |
| 119 | GO:0005975: carbohydrate metabolic process | 2.16E-02 |
| 120 | GO:0048481: plant ovule development | 2.38E-02 |
| 121 | GO:0018298: protein-chromophore linkage | 2.38E-02 |
| 122 | GO:0000160: phosphorelay signal transduction system | 2.46E-02 |
| 123 | GO:0009813: flavonoid biosynthetic process | 2.46E-02 |
| 124 | GO:0009834: plant-type secondary cell wall biogenesis | 2.55E-02 |
| 125 | GO:0006811: ion transport | 2.55E-02 |
| 126 | GO:0010043: response to zinc ion | 2.64E-02 |
| 127 | GO:0080167: response to karrikin | 2.64E-02 |
| 128 | GO:0006099: tricarboxylic acid cycle | 2.90E-02 |
| 129 | GO:0009926: auxin polar transport | 3.37E-02 |
| 130 | GO:0009640: photomorphogenesis | 3.37E-02 |
| 131 | GO:0010114: response to red light | 3.37E-02 |
| 132 | GO:0000209: protein polyubiquitination | 3.47E-02 |
| 133 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.86E-02 |
| 134 | GO:0000165: MAPK cascade | 3.86E-02 |
| 135 | GO:0006812: cation transport | 3.96E-02 |
| 136 | GO:0006979: response to oxidative stress | 4.16E-02 |
| 137 | GO:0006364: rRNA processing | 4.17E-02 |
| 138 | GO:0009585: red, far-red light phototransduction | 4.17E-02 |
| 139 | GO:0048367: shoot system development | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
| 2 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 3 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 4 | GO:0008476: protein-tyrosine sulfotransferase activity | 0.00E+00 |
| 5 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 6 | GO:0047787: delta4-3-oxosteroid 5beta-reductase activity | 0.00E+00 |
| 7 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 8 | GO:0017095: heparan sulfate 6-O-sulfotransferase activity | 0.00E+00 |
| 9 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 10 | GO:0005358: high-affinity hydrogen:glucose symporter activity | 0.00E+00 |
| 11 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 12 | GO:0033857: diphosphoinositol-pentakisphosphate kinase activity | 1.54E-04 |
| 13 | GO:0016906: sterol 3-beta-glucosyltransferase activity | 1.54E-04 |
| 14 | GO:0009679: hexose:proton symporter activity | 1.54E-04 |
| 15 | GO:0035671: enone reductase activity | 1.54E-04 |
| 16 | GO:0000829: inositol heptakisphosphate kinase activity | 1.54E-04 |
| 17 | GO:0010013: N-1-naphthylphthalamic acid binding | 1.54E-04 |
| 18 | GO:0080079: cellobiose glucosidase activity | 1.54E-04 |
| 19 | GO:0102203: brassicasterol glucosyltransferase activity | 1.54E-04 |
| 20 | GO:0102202: soladodine glucosyltransferase activity | 1.54E-04 |
| 21 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.54E-04 |
| 22 | GO:0046870: cadmium ion binding | 1.54E-04 |
| 23 | GO:0000828: inositol hexakisphosphate kinase activity | 1.54E-04 |
| 24 | GO:0070006: metalloaminopeptidase activity | 1.54E-04 |
| 25 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 1.54E-04 |
| 26 | GO:0032791: lead ion binding | 3.51E-04 |
| 27 | GO:0004609: phosphatidylserine decarboxylase activity | 3.51E-04 |
| 28 | GO:0003994: aconitate hydratase activity | 3.51E-04 |
| 29 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 3.51E-04 |
| 30 | GO:0004839: ubiquitin activating enzyme activity | 3.51E-04 |
| 31 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 3.51E-04 |
| 32 | GO:0015180: L-alanine transmembrane transporter activity | 3.51E-04 |
| 33 | GO:0001047: core promoter binding | 3.51E-04 |
| 34 | GO:0019948: SUMO activating enzyme activity | 5.75E-04 |
| 35 | GO:0019829: cation-transporting ATPase activity | 5.75E-04 |
| 36 | GO:0017150: tRNA dihydrouridine synthase activity | 5.75E-04 |
| 37 | GO:0004096: catalase activity | 5.75E-04 |
| 38 | GO:0004300: enoyl-CoA hydratase activity | 8.23E-04 |
| 39 | GO:0015189: L-lysine transmembrane transporter activity | 8.23E-04 |
| 40 | GO:0048027: mRNA 5'-UTR binding | 8.23E-04 |
| 41 | GO:0015181: arginine transmembrane transporter activity | 8.23E-04 |
| 42 | GO:0043023: ribosomal large subunit binding | 8.23E-04 |
| 43 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 8.23E-04 |
| 44 | GO:0005313: L-glutamate transmembrane transporter activity | 1.09E-03 |
| 45 | GO:0005253: anion channel activity | 1.09E-03 |
| 46 | GO:0042277: peptide binding | 1.09E-03 |
| 47 | GO:0010294: abscisic acid glucosyltransferase activity | 1.38E-03 |
| 48 | GO:0015145: monosaccharide transmembrane transporter activity | 1.38E-03 |
| 49 | GO:0008641: small protein activating enzyme activity | 1.38E-03 |
| 50 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.38E-03 |
| 51 | GO:2001070: starch binding | 1.70E-03 |
| 52 | GO:0004629: phospholipase C activity | 1.70E-03 |
| 53 | GO:0015562: efflux transmembrane transporter activity | 1.70E-03 |
| 54 | GO:0000293: ferric-chelate reductase activity | 1.70E-03 |
| 55 | GO:0019137: thioglucosidase activity | 1.70E-03 |
| 56 | GO:0070300: phosphatidic acid binding | 2.03E-03 |
| 57 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 2.03E-03 |
| 58 | GO:0004849: uridine kinase activity | 2.03E-03 |
| 59 | GO:0004435: phosphatidylinositol phospholipase C activity | 2.03E-03 |
| 60 | GO:0102483: scopolin beta-glucosidase activity | 2.30E-03 |
| 61 | GO:0009881: photoreceptor activity | 2.39E-03 |
| 62 | GO:0015140: malate transmembrane transporter activity | 2.39E-03 |
| 63 | GO:0004033: aldo-keto reductase (NADP) activity | 2.77E-03 |
| 64 | GO:0005375: copper ion transmembrane transporter activity | 3.16E-03 |
| 65 | GO:0008422: beta-glucosidase activity | 3.50E-03 |
| 66 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 3.58E-03 |
| 67 | GO:0004177: aminopeptidase activity | 4.92E-03 |
| 68 | GO:0015095: magnesium ion transmembrane transporter activity | 5.91E-03 |
| 69 | GO:0004565: beta-galactosidase activity | 5.91E-03 |
| 70 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.91E-03 |
| 71 | GO:0031624: ubiquitin conjugating enzyme binding | 6.42E-03 |
| 72 | GO:0030552: cAMP binding | 6.95E-03 |
| 73 | GO:0030553: cGMP binding | 6.95E-03 |
| 74 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 7.22E-03 |
| 75 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 7.22E-03 |
| 76 | GO:0005216: ion channel activity | 8.63E-03 |
| 77 | GO:0008324: cation transmembrane transporter activity | 8.63E-03 |
| 78 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 9.22E-03 |
| 79 | GO:0004707: MAP kinase activity | 9.22E-03 |
| 80 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.02E-02 |
| 81 | GO:0005249: voltage-gated potassium channel activity | 1.24E-02 |
| 82 | GO:0030551: cyclic nucleotide binding | 1.24E-02 |
| 83 | GO:0046873: metal ion transmembrane transporter activity | 1.31E-02 |
| 84 | GO:0015297: antiporter activity | 1.31E-02 |
| 85 | GO:0016301: kinase activity | 1.60E-02 |
| 86 | GO:0000156: phosphorelay response regulator activity | 1.66E-02 |
| 87 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.81E-02 |
| 88 | GO:0003729: mRNA binding | 2.09E-02 |
| 89 | GO:0030247: polysaccharide binding | 2.21E-02 |
| 90 | GO:0050897: cobalt ion binding | 2.64E-02 |
| 91 | GO:0004497: monooxygenase activity | 2.64E-02 |
| 92 | GO:0005507: copper ion binding | 2.67E-02 |
| 93 | GO:0005515: protein binding | 2.80E-02 |
| 94 | GO:0003697: single-stranded DNA binding | 2.81E-02 |
| 95 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.09E-02 |
| 96 | GO:0004185: serine-type carboxypeptidase activity | 3.37E-02 |
| 97 | GO:0004722: protein serine/threonine phosphatase activity | 3.46E-02 |
| 98 | GO:0005198: structural molecule activity | 3.66E-02 |
| 99 | GO:0005509: calcium ion binding | 3.73E-02 |
| 100 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.76E-02 |
| 101 | GO:0008270: zinc ion binding | 4.21E-02 |
| 102 | GO:0003690: double-stranded DNA binding | 4.27E-02 |
| 103 | GO:0015171: amino acid transmembrane transporter activity | 4.48E-02 |
| 104 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032777: Piccolo NuA4 histone acetyltransferase complex | 3.51E-04 |
| 2 | GO:0043036: starch grain | 3.51E-04 |
| 3 | GO:0005777: peroxisome | 1.12E-03 |
| 4 | GO:0005851: eukaryotic translation initiation factor 2B complex | 1.70E-03 |
| 5 | GO:0016363: nuclear matrix | 2.03E-03 |
| 6 | GO:0016021: integral component of membrane | 2.12E-03 |
| 7 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 3.16E-03 |
| 8 | GO:0031090: organelle membrane | 3.58E-03 |
| 9 | GO:0031966: mitochondrial membrane | 5.18E-03 |
| 10 | GO:0005938: cell cortex | 5.91E-03 |
| 11 | GO:0005829: cytosol | 6.14E-03 |
| 12 | GO:0005773: vacuole | 7.34E-03 |
| 13 | GO:0005654: nucleoplasm | 9.65E-03 |
| 14 | GO:0005618: cell wall | 1.16E-02 |
| 15 | GO:0031965: nuclear membrane | 1.44E-02 |
| 16 | GO:0016020: membrane | 1.82E-02 |
| 17 | GO:0009506: plasmodesma | 2.13E-02 |
| 18 | GO:0000151: ubiquitin ligase complex | 2.38E-02 |
| 19 | GO:0000786: nucleosome | 2.72E-02 |
| 20 | GO:0005886: plasma membrane | 3.06E-02 |
| 21 | GO:0005783: endoplasmic reticulum | 3.37E-02 |
| 22 | GO:0005768: endosome | 3.62E-02 |