Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G39220

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002376: immune system process0.00E+00
2GO:0030149: sphingolipid catabolic process0.00E+00
3GO:0048034: heme O biosynthetic process0.00E+00
4GO:0006784: heme a biosynthetic process0.00E+00
5GO:0046865: terpenoid transport0.00E+00
6GO:0006793: phosphorus metabolic process0.00E+00
7GO:0051238: sequestering of metal ion0.00E+00
8GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
9GO:0072722: response to amitrole0.00E+00
10GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
11GO:0070212: protein poly-ADP-ribosylation0.00E+00
12GO:0042430: indole-containing compound metabolic process0.00E+00
13GO:0042742: defense response to bacterium1.98E-09
14GO:0009617: response to bacterium4.98E-08
15GO:0009626: plant-type hypersensitive response5.20E-07
16GO:0002237: response to molecule of bacterial origin2.63E-06
17GO:0010204: defense response signaling pathway, resistance gene-independent1.49E-05
18GO:0010193: response to ozone3.80E-05
19GO:0010200: response to chitin4.39E-05
20GO:0006468: protein phosphorylation9.18E-05
21GO:0070588: calcium ion transmembrane transport1.00E-04
22GO:0071456: cellular response to hypoxia2.09E-04
23GO:0032491: detection of molecule of fungal origin3.34E-04
24GO:0015760: glucose-6-phosphate transport3.34E-04
25GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.34E-04
26GO:0033306: phytol metabolic process3.34E-04
27GO:0030091: protein repair3.55E-04
28GO:0009751: response to salicylic acid5.52E-04
29GO:0055114: oxidation-reduction process6.66E-04
30GO:0051607: defense response to virus7.11E-04
31GO:0009870: defense response signaling pathway, resistance gene-dependent7.22E-04
32GO:0006032: chitin catabolic process7.22E-04
33GO:0002240: response to molecule of oomycetes origin7.29E-04
34GO:0044419: interspecies interaction between organisms7.29E-04
35GO:0019752: carboxylic acid metabolic process7.29E-04
36GO:0046475: glycerophospholipid catabolic process7.29E-04
37GO:0015712: hexose phosphate transport7.29E-04
38GO:1902000: homogentisate catabolic process7.29E-04
39GO:0051592: response to calcium ion7.29E-04
40GO:0006123: mitochondrial electron transport, cytochrome c to oxygen7.29E-04
41GO:0048569: post-embryonic animal organ development7.29E-04
42GO:0090057: root radial pattern formation7.29E-04
43GO:0009866: induced systemic resistance, ethylene mediated signaling pathway7.29E-04
44GO:0000272: polysaccharide catabolic process8.32E-04
45GO:0009627: systemic acquired resistance8.77E-04
46GO:0008219: cell death1.06E-03
47GO:0071367: cellular response to brassinosteroid stimulus1.18E-03
48GO:0010581: regulation of starch biosynthetic process1.18E-03
49GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.18E-03
50GO:0034051: negative regulation of plant-type hypersensitive response1.18E-03
51GO:1900140: regulation of seedling development1.18E-03
52GO:0035436: triose phosphate transmembrane transport1.18E-03
53GO:0010351: lithium ion transport1.18E-03
54GO:0010272: response to silver ion1.18E-03
55GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.18E-03
56GO:0015692: lead ion transport1.18E-03
57GO:0009072: aromatic amino acid family metabolic process1.18E-03
58GO:0048281: inflorescence morphogenesis1.18E-03
59GO:0015714: phosphoenolpyruvate transport1.18E-03
60GO:0080168: abscisic acid transport1.18E-03
61GO:0009407: toxin catabolic process1.20E-03
62GO:0010104: regulation of ethylene-activated signaling pathway1.70E-03
63GO:0048530: fruit morphogenesis1.70E-03
64GO:0006882: cellular zinc ion homeostasis1.70E-03
65GO:0001676: long-chain fatty acid metabolic process1.70E-03
66GO:0046836: glycolipid transport1.70E-03
67GO:0045017: glycerolipid biosynthetic process1.70E-03
68GO:0019438: aromatic compound biosynthetic process1.70E-03
69GO:0048194: Golgi vesicle budding1.70E-03
70GO:0070301: cellular response to hydrogen peroxide1.70E-03
71GO:0006874: cellular calcium ion homeostasis1.84E-03
72GO:0010150: leaf senescence1.86E-03
73GO:0051707: response to other organism1.98E-03
74GO:0016998: cell wall macromolecule catabolic process2.02E-03
75GO:0015713: phosphoglycerate transport2.28E-03
76GO:0010109: regulation of photosynthesis2.28E-03
77GO:0060548: negative regulation of cell death2.28E-03
78GO:0045727: positive regulation of translation2.28E-03
79GO:0006536: glutamate metabolic process2.28E-03
80GO:1901002: positive regulation of response to salt stress2.28E-03
81GO:0009636: response to toxic substance2.29E-03
82GO:0006855: drug transmembrane transport2.41E-03
83GO:0006817: phosphate ion transport2.62E-03
84GO:0045487: gibberellin catabolic process2.91E-03
85GO:0006461: protein complex assembly2.91E-03
86GO:0000304: response to singlet oxygen2.91E-03
87GO:0009697: salicylic acid biosynthetic process2.91E-03
88GO:0034052: positive regulation of plant-type hypersensitive response2.91E-03
89GO:0010337: regulation of salicylic acid metabolic process3.60E-03
90GO:0009228: thiamine biosynthetic process3.60E-03
91GO:0009117: nucleotide metabolic process3.60E-03
92GO:0002238: response to molecule of fungal origin3.60E-03
93GO:0009643: photosynthetic acclimation3.60E-03
94GO:0050665: hydrogen peroxide biosynthetic process3.60E-03
95GO:0006121: mitochondrial electron transport, succinate to ubiquinone3.60E-03
96GO:0015691: cadmium ion transport3.60E-03
97GO:0060918: auxin transport3.60E-03
98GO:0009749: response to glucose3.81E-03
99GO:0010199: organ boundary specification between lateral organs and the meristem4.33E-03
100GO:0009554: megasporogenesis4.33E-03
101GO:0009854: oxidative photosynthetic carbon pathway4.33E-03
102GO:0010555: response to mannitol4.33E-03
103GO:2000067: regulation of root morphogenesis4.33E-03
104GO:0030643: cellular phosphate ion homeostasis4.33E-03
105GO:0009624: response to nematode4.53E-03
106GO:0070370: cellular heat acclimation5.11E-03
107GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c5.11E-03
108GO:0030026: cellular manganese ion homeostasis5.11E-03
109GO:1900057: positive regulation of leaf senescence5.11E-03
110GO:0006955: immune response5.11E-03
111GO:2000070: regulation of response to water deprivation5.94E-03
112GO:0006102: isocitrate metabolic process5.94E-03
113GO:0009816: defense response to bacterium, incompatible interaction6.23E-03
114GO:0007186: G-protein coupled receptor signaling pathway6.81E-03
115GO:0010262: somatic embryogenesis6.81E-03
116GO:0010120: camalexin biosynthetic process6.81E-03
117GO:0030968: endoplasmic reticulum unfolded protein response6.81E-03
118GO:0022900: electron transport chain6.81E-03
119GO:0001558: regulation of cell growth6.81E-03
120GO:0006979: response to oxidative stress7.24E-03
121GO:0019432: triglyceride biosynthetic process7.73E-03
122GO:0006783: heme biosynthetic process7.73E-03
123GO:0010112: regulation of systemic acquired resistance7.73E-03
124GO:0046685: response to arsenic-containing substance7.73E-03
125GO:0032259: methylation8.51E-03
126GO:0040008: regulation of growth8.58E-03
127GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.68E-03
128GO:0055085: transmembrane transport9.57E-03
129GO:0007064: mitotic sister chromatid cohesion9.69E-03
130GO:0055062: phosphate ion homeostasis9.69E-03
131GO:0009682: induced systemic resistance1.07E-02
132GO:0009089: lysine biosynthetic process via diaminopimelate1.07E-02
133GO:0015770: sucrose transport1.07E-02
134GO:0009750: response to fructose1.07E-02
135GO:0048229: gametophyte development1.07E-02
136GO:0006816: calcium ion transport1.07E-02
137GO:0007166: cell surface receptor signaling pathway1.08E-02
138GO:0006631: fatty acid metabolic process1.16E-02
139GO:0002213: defense response to insect1.18E-02
140GO:0015706: nitrate transport1.18E-02
141GO:0006820: anion transport1.18E-02
142GO:0042542: response to hydrogen peroxide1.21E-02
143GO:0009744: response to sucrose1.26E-02
144GO:0034605: cellular response to heat1.41E-02
145GO:0010167: response to nitrate1.53E-02
146GO:0046688: response to copper ion1.53E-02
147GO:0010053: root epidermal cell differentiation1.53E-02
148GO:0042343: indole glucosinolate metabolic process1.53E-02
149GO:0031347: regulation of defense response1.53E-02
150GO:0006071: glycerol metabolic process1.65E-02
151GO:0000162: tryptophan biosynthetic process1.65E-02
152GO:0000027: ribosomal large subunit assembly1.77E-02
153GO:0009863: salicylic acid mediated signaling pathway1.77E-02
154GO:0045333: cellular respiration1.77E-02
155GO:0006825: copper ion transport1.90E-02
156GO:0051302: regulation of cell division1.90E-02
157GO:0098542: defense response to other organism2.03E-02
158GO:0035428: hexose transmembrane transport2.17E-02
159GO:0031348: negative regulation of defense response2.17E-02
160GO:0016226: iron-sulfur cluster assembly2.17E-02
161GO:0009620: response to fungus2.22E-02
162GO:0071215: cellular response to abscisic acid stimulus2.31E-02
163GO:0009686: gibberellin biosynthetic process2.31E-02
164GO:0009411: response to UV2.31E-02
165GO:0071369: cellular response to ethylene stimulus2.31E-02
166GO:0044550: secondary metabolite biosynthetic process2.32E-02
167GO:0010091: trichome branching2.45E-02
168GO:0042391: regulation of membrane potential2.74E-02
169GO:0006520: cellular amino acid metabolic process2.89E-02
170GO:0046323: glucose import2.89E-02
171GO:0009958: positive gravitropism2.89E-02
172GO:0007165: signal transduction2.90E-02
173GO:0009651: response to salt stress3.00E-02
174GO:0048544: recognition of pollen3.05E-02
175GO:0006814: sodium ion transport3.05E-02
176GO:0010183: pollen tube guidance3.20E-02
177GO:0002229: defense response to oomycetes3.36E-02
178GO:0000302: response to reactive oxygen species3.36E-02
179GO:0006511: ubiquitin-dependent protein catabolic process3.38E-02
180GO:0032502: developmental process3.52E-02
181GO:0030163: protein catabolic process3.69E-02
182GO:0006952: defense response3.81E-02
183GO:0009639: response to red or far red light3.85E-02
184GO:0010252: auxin homeostasis3.85E-02
185GO:0006904: vesicle docking involved in exocytosis4.02E-02
186GO:0001666: response to hypoxia4.37E-02
187GO:0009615: response to virus4.37E-02
188GO:0042128: nitrate assimilation4.72E-02
RankGO TermAdjusted P value
1GO:0008495: protoheme IX farnesyltransferase activity0.00E+00
2GO:0016034: maleylacetoacetate isomerase activity0.00E+00
3GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
4GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
5GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
6GO:0005388: calcium-transporting ATPase activity1.98E-06
7GO:0004674: protein serine/threonine kinase activity1.16E-04
8GO:0005524: ATP binding1.43E-04
9GO:0102391: decanoate--CoA ligase activity2.18E-04
10GO:0004144: diacylglycerol O-acyltransferase activity2.18E-04
11GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.18E-04
12GO:0004467: long-chain fatty acid-CoA ligase activity2.83E-04
13GO:0004048: anthranilate phosphoribosyltransferase activity3.34E-04
14GO:0010285: L,L-diaminopimelate aminotransferase activity3.34E-04
15GO:0080042: ADP-glucose pyrophosphohydrolase activity3.34E-04
16GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.34E-04
17GO:0043565: sequence-specific DNA binding3.92E-04
18GO:0004568: chitinase activity7.22E-04
19GO:0019172: glyoxalase III activity7.29E-04
20GO:0050736: O-malonyltransferase activity7.29E-04
21GO:0004385: guanylate kinase activity7.29E-04
22GO:0045543: gibberellin 2-beta-dioxygenase activity7.29E-04
23GO:0080041: ADP-ribose pyrophosphohydrolase activity7.29E-04
24GO:0015152: glucose-6-phosphate transmembrane transporter activity7.29E-04
25GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity7.29E-04
26GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity7.29E-04
27GO:0017110: nucleoside-diphosphatase activity7.29E-04
28GO:0016301: kinase activity9.99E-04
29GO:0050660: flavin adenine dinucleotide binding1.03E-03
30GO:0005315: inorganic phosphate transmembrane transporter activity1.07E-03
31GO:0004148: dihydrolipoyl dehydrogenase activity1.18E-03
32GO:0031683: G-protein beta/gamma-subunit complex binding1.18E-03
33GO:0071917: triose-phosphate transmembrane transporter activity1.18E-03
34GO:0001664: G-protein coupled receptor binding1.18E-03
35GO:0016531: copper chaperone activity1.18E-03
36GO:0005516: calmodulin binding1.19E-03
37GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.28E-03
38GO:0008061: chitin binding1.35E-03
39GO:0004449: isocitrate dehydrogenase (NAD+) activity1.70E-03
40GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.70E-03
41GO:0004351: glutamate decarboxylase activity1.70E-03
42GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.70E-03
43GO:0017089: glycolipid transporter activity1.70E-03
44GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.70E-03
45GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.70E-03
46GO:0004871: signal transducer activity1.73E-03
47GO:0004364: glutathione transferase activity1.88E-03
48GO:0010279: indole-3-acetic acid amido synthetase activity2.28E-03
49GO:0009916: alternative oxidase activity2.28E-03
50GO:0008891: glycolate oxidase activity2.28E-03
51GO:0015120: phosphoglycerate transmembrane transporter activity2.28E-03
52GO:0004659: prenyltransferase activity2.28E-03
53GO:0015368: calcium:cation antiporter activity2.28E-03
54GO:0051861: glycolipid binding2.28E-03
55GO:0015369: calcium:proton antiporter activity2.28E-03
56GO:0022891: substrate-specific transmembrane transporter activity2.41E-03
57GO:0009055: electron carrier activity2.61E-03
58GO:0046872: metal ion binding2.84E-03
59GO:0000104: succinate dehydrogenase activity2.91E-03
60GO:0047631: ADP-ribose diphosphatase activity2.91E-03
61GO:0015145: monosaccharide transmembrane transporter activity2.91E-03
62GO:0000210: NAD+ diphosphatase activity3.60E-03
63GO:0030976: thiamine pyrophosphate binding3.60E-03
64GO:0004012: phospholipid-translocating ATPase activity4.33E-03
65GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.33E-03
66GO:0016831: carboxy-lyase activity5.11E-03
67GO:0008506: sucrose:proton symporter activity5.11E-03
68GO:0004311: farnesyltranstransferase activity5.94E-03
69GO:0015491: cation:cation antiporter activity5.94E-03
70GO:0004714: transmembrane receptor protein tyrosine kinase activity5.94E-03
71GO:0015288: porin activity5.94E-03
72GO:0008308: voltage-gated anion channel activity6.81E-03
73GO:0030170: pyridoxal phosphate binding6.89E-03
74GO:0008757: S-adenosylmethionine-dependent methyltransferase activity7.32E-03
75GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen7.43E-03
76GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors7.73E-03
77GO:0008889: glycerophosphodiester phosphodiesterase activity7.73E-03
78GO:0015238: drug transmembrane transporter activity8.09E-03
79GO:0015297: antiporter activity8.58E-03
80GO:0015112: nitrate transmembrane transporter activity8.68E-03
81GO:0050897: cobalt ion binding8.91E-03
82GO:0004713: protein tyrosine kinase activity9.69E-03
83GO:0008171: O-methyltransferase activity9.69E-03
84GO:0015020: glucuronosyltransferase activity9.69E-03
85GO:0008794: arsenate reductase (glutaredoxin) activity1.07E-02
86GO:0008559: xenobiotic-transporting ATPase activity1.07E-02
87GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.24E-02
88GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.29E-02
89GO:0004022: alcohol dehydrogenase (NAD) activity1.29E-02
90GO:0005262: calcium channel activity1.29E-02
91GO:0015114: phosphate ion transmembrane transporter activity1.29E-02
92GO:0004672: protein kinase activity1.50E-02
93GO:0008168: methyltransferase activity1.51E-02
94GO:0003712: transcription cofactor activity1.53E-02
95GO:0004970: ionotropic glutamate receptor activity1.53E-02
96GO:0005217: intracellular ligand-gated ion channel activity1.53E-02
97GO:0004190: aspartic-type endopeptidase activity1.53E-02
98GO:0030552: cAMP binding1.53E-02
99GO:0051287: NAD binding1.53E-02
100GO:0030553: cGMP binding1.53E-02
101GO:0000287: magnesium ion binding1.55E-02
102GO:0008134: transcription factor binding1.77E-02
103GO:0016298: lipase activity1.77E-02
104GO:0005509: calcium ion binding1.86E-02
105GO:0005216: ion channel activity1.90E-02
106GO:0004298: threonine-type endopeptidase activity2.03E-02
107GO:0033612: receptor serine/threonine kinase binding2.03E-02
108GO:0052689: carboxylic ester hydrolase activity2.36E-02
109GO:0004499: N,N-dimethylaniline monooxygenase activity2.45E-02
110GO:0005215: transporter activity2.53E-02
111GO:0005249: voltage-gated potassium channel activity2.74E-02
112GO:0030551: cyclic nucleotide binding2.74E-02
113GO:0005355: glucose transmembrane transporter activity3.05E-02
114GO:0010181: FMN binding3.05E-02
115GO:0019825: oxygen binding3.62E-02
116GO:0015144: carbohydrate transmembrane transporter activity3.64E-02
117GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.91E-02
118GO:0008237: metallopeptidase activity4.02E-02
119GO:0008483: transaminase activity4.02E-02
120GO:0005351: sugar:proton symporter activity4.10E-02
121GO:0003700: transcription factor activity, sequence-specific DNA binding4.22E-02
122GO:0051213: dioxygenase activity4.37E-02
123GO:0020037: heme binding4.55E-02
124GO:0030247: polysaccharide binding4.90E-02
125GO:0004683: calmodulin-dependent protein kinase activity4.90E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane8.21E-05
2GO:0005758: mitochondrial intermembrane space1.38E-04
3GO:0016021: integral component of membrane2.27E-04
4GO:0005887: integral component of plasma membrane1.04E-03
5GO:0070469: respiratory chain1.84E-03
6GO:0005741: mitochondrial outer membrane2.02E-03
7GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)5.94E-03
8GO:0046930: pore complex6.81E-03
9GO:0019773: proteasome core complex, alpha-subunit complex6.81E-03
10GO:0000325: plant-type vacuole8.91E-03
11GO:0005740: mitochondrial envelope9.69E-03
12GO:0008541: proteasome regulatory particle, lid subcomplex1.07E-02
13GO:0016602: CCAAT-binding factor complex1.29E-02
14GO:0005774: vacuolar membrane1.34E-02
15GO:0000502: proteasome complex1.71E-02
16GO:0005839: proteasome core complex2.03E-02
17GO:0005747: mitochondrial respiratory chain complex I2.09E-02
18GO:0005834: heterotrimeric G-protein complex2.15E-02
19GO:0005783: endoplasmic reticulum2.99E-02
20GO:0005743: mitochondrial inner membrane3.10E-02
21GO:0005829: cytosol3.29E-02
22GO:0000145: exocyst3.52E-02
23GO:0043231: intracellular membrane-bounded organelle3.82E-02
Gene type



Gene DE type