GO Enrichment Analysis of Co-expressed Genes with
AT4G39090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071211: protein targeting to vacuole involved in autophagy | 0.00E+00 |
| 2 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 3 | GO:0046459: short-chain fatty acid metabolic process | 0.00E+00 |
| 4 | GO:0010478: chlororespiration | 0.00E+00 |
| 5 | GO:1904962: plastid to vacuole vesicle-mediated transport | 0.00E+00 |
| 6 | GO:0042906: xanthine transport | 0.00E+00 |
| 7 | GO:1900060: negative regulation of ceramide biosynthetic process | 1.00E-04 |
| 8 | GO:1903409: reactive oxygen species biosynthetic process | 1.00E-04 |
| 9 | GO:0010468: regulation of gene expression | 1.73E-04 |
| 10 | GO:1902000: homogentisate catabolic process | 2.36E-04 |
| 11 | GO:0090156: cellular sphingolipid homeostasis | 2.36E-04 |
| 12 | GO:0015720: allantoin transport | 2.36E-04 |
| 13 | GO:0015857: uracil transport | 2.36E-04 |
| 14 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.57E-04 |
| 15 | GO:0030029: actin filament-based process | 3.92E-04 |
| 16 | GO:0009072: aromatic amino acid family metabolic process | 3.92E-04 |
| 17 | GO:0071705: nitrogen compound transport | 3.92E-04 |
| 18 | GO:0042344: indole glucosinolate catabolic process | 3.92E-04 |
| 19 | GO:1901332: negative regulation of lateral root development | 5.64E-04 |
| 20 | GO:0006572: tyrosine catabolic process | 5.64E-04 |
| 21 | GO:0006624: vacuolar protein processing | 5.64E-04 |
| 22 | GO:0015749: monosaccharide transport | 5.64E-04 |
| 23 | GO:0010222: stem vascular tissue pattern formation | 7.50E-04 |
| 24 | GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly | 7.50E-04 |
| 25 | GO:0010600: regulation of auxin biosynthetic process | 7.50E-04 |
| 26 | GO:0043097: pyrimidine nucleoside salvage | 9.47E-04 |
| 27 | GO:0010286: heat acclimation | 9.96E-04 |
| 28 | GO:0006979: response to oxidative stress | 1.09E-03 |
| 29 | GO:0042732: D-xylose metabolic process | 1.16E-03 |
| 30 | GO:0006206: pyrimidine nucleobase metabolic process | 1.16E-03 |
| 31 | GO:0000741: karyogamy | 1.16E-03 |
| 32 | GO:0006694: steroid biosynthetic process | 1.38E-03 |
| 33 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.38E-03 |
| 34 | GO:0009817: defense response to fungus, incompatible interaction | 1.44E-03 |
| 35 | GO:0010044: response to aluminum ion | 1.62E-03 |
| 36 | GO:0098869: cellular oxidant detoxification | 1.62E-03 |
| 37 | GO:0009415: response to water | 1.87E-03 |
| 38 | GO:0010928: regulation of auxin mediated signaling pathway | 1.87E-03 |
| 39 | GO:0070413: trehalose metabolism in response to stress | 1.87E-03 |
| 40 | GO:0006972: hyperosmotic response | 2.14E-03 |
| 41 | GO:0046916: cellular transition metal ion homeostasis | 2.41E-03 |
| 42 | GO:0006098: pentose-phosphate shunt | 2.41E-03 |
| 43 | GO:0000165: MAPK cascade | 2.80E-03 |
| 44 | GO:0007064: mitotic sister chromatid cohesion | 3.00E-03 |
| 45 | GO:0009641: shade avoidance | 3.00E-03 |
| 46 | GO:0030148: sphingolipid biosynthetic process | 3.31E-03 |
| 47 | GO:0009682: induced systemic resistance | 3.31E-03 |
| 48 | GO:0052544: defense response by callose deposition in cell wall | 3.31E-03 |
| 49 | GO:0007034: vacuolar transport | 4.30E-03 |
| 50 | GO:0034976: response to endoplasmic reticulum stress | 5.00E-03 |
| 51 | GO:0005992: trehalose biosynthetic process | 5.37E-03 |
| 52 | GO:0009269: response to desiccation | 6.14E-03 |
| 53 | GO:0009693: ethylene biosynthetic process | 6.94E-03 |
| 54 | GO:0071215: cellular response to abscisic acid stimulus | 6.94E-03 |
| 55 | GO:0048443: stamen development | 7.35E-03 |
| 56 | GO:0009409: response to cold | 7.48E-03 |
| 57 | GO:0010150: leaf senescence | 7.61E-03 |
| 58 | GO:0042631: cellular response to water deprivation | 8.21E-03 |
| 59 | GO:0006662: glycerol ether metabolic process | 8.65E-03 |
| 60 | GO:0010197: polar nucleus fusion | 8.65E-03 |
| 61 | GO:0046323: glucose import | 8.65E-03 |
| 62 | GO:0009960: endosperm development | 8.65E-03 |
| 63 | GO:0009617: response to bacterium | 9.09E-03 |
| 64 | GO:0061025: membrane fusion | 9.10E-03 |
| 65 | GO:0006635: fatty acid beta-oxidation | 1.00E-02 |
| 66 | GO:0019760: glucosinolate metabolic process | 1.15E-02 |
| 67 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.20E-02 |
| 68 | GO:0016126: sterol biosynthetic process | 1.30E-02 |
| 69 | GO:0007165: signal transduction | 1.43E-02 |
| 70 | GO:0048573: photoperiodism, flowering | 1.46E-02 |
| 71 | GO:0006950: response to stress | 1.46E-02 |
| 72 | GO:0016192: vesicle-mediated transport | 1.54E-02 |
| 73 | GO:0008219: cell death | 1.57E-02 |
| 74 | GO:0009631: cold acclimation | 1.74E-02 |
| 75 | GO:0016051: carbohydrate biosynthetic process | 1.86E-02 |
| 76 | GO:0034599: cellular response to oxidative stress | 1.91E-02 |
| 77 | GO:0042742: defense response to bacterium | 1.99E-02 |
| 78 | GO:0030001: metal ion transport | 2.03E-02 |
| 79 | GO:0009751: response to salicylic acid | 2.14E-02 |
| 80 | GO:0042542: response to hydrogen peroxide | 2.16E-02 |
| 81 | GO:0009640: photomorphogenesis | 2.22E-02 |
| 82 | GO:0008643: carbohydrate transport | 2.35E-02 |
| 83 | GO:0006260: DNA replication | 2.55E-02 |
| 84 | GO:0009585: red, far-red light phototransduction | 2.75E-02 |
| 85 | GO:0009620: response to fungus | 3.31E-02 |
| 86 | GO:0005975: carbohydrate metabolic process | 3.34E-02 |
| 87 | GO:0009611: response to wounding | 3.92E-02 |
| 88 | GO:0035556: intracellular signal transduction | 4.05E-02 |
| 89 | GO:0009058: biosynthetic process | 4.30E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005358: high-affinity hydrogen:glucose symporter activity | 0.00E+00 |
| 2 | GO:0042907: xanthine transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0009045: xylose isomerase activity | 0.00E+00 |
| 4 | GO:0004334: fumarylacetoacetase activity | 0.00E+00 |
| 5 | GO:0009679: hexose:proton symporter activity | 1.00E-04 |
| 6 | GO:0001530: lipopolysaccharide binding | 1.00E-04 |
| 7 | GO:0046870: cadmium ion binding | 1.00E-04 |
| 8 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.00E-04 |
| 9 | GO:0004856: xylulokinase activity | 1.00E-04 |
| 10 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 2.36E-04 |
| 11 | GO:0032791: lead ion binding | 2.36E-04 |
| 12 | GO:0005274: allantoin uptake transmembrane transporter activity | 2.36E-04 |
| 13 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 2.36E-04 |
| 14 | GO:0005483: soluble NSF attachment protein activity | 3.92E-04 |
| 15 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 3.92E-04 |
| 16 | GO:0004707: MAP kinase activity | 3.94E-04 |
| 17 | GO:0019905: syntaxin binding | 7.50E-04 |
| 18 | GO:0015210: uracil transmembrane transporter activity | 7.50E-04 |
| 19 | GO:0003995: acyl-CoA dehydrogenase activity | 7.50E-04 |
| 20 | GO:0004197: cysteine-type endopeptidase activity | 8.35E-04 |
| 21 | GO:0003997: acyl-CoA oxidase activity | 9.47E-04 |
| 22 | GO:0015145: monosaccharide transmembrane transporter activity | 9.47E-04 |
| 23 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 9.47E-04 |
| 24 | GO:0019137: thioglucosidase activity | 1.16E-03 |
| 25 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.16E-03 |
| 26 | GO:0004849: uridine kinase activity | 1.38E-03 |
| 27 | GO:0004602: glutathione peroxidase activity | 1.38E-03 |
| 28 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.87E-03 |
| 29 | GO:0000989: transcription factor activity, transcription factor binding | 2.41E-03 |
| 30 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 2.41E-03 |
| 31 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 2.70E-03 |
| 32 | GO:0004805: trehalose-phosphatase activity | 3.00E-03 |
| 33 | GO:0008081: phosphoric diester hydrolase activity | 3.95E-03 |
| 34 | GO:0004175: endopeptidase activity | 4.30E-03 |
| 35 | GO:0008134: transcription factor binding | 5.37E-03 |
| 36 | GO:0015144: carbohydrate transmembrane transporter activity | 6.60E-03 |
| 37 | GO:0022891: substrate-specific transmembrane transporter activity | 6.94E-03 |
| 38 | GO:0003756: protein disulfide isomerase activity | 7.35E-03 |
| 39 | GO:0047134: protein-disulfide reductase activity | 7.78E-03 |
| 40 | GO:0003713: transcription coactivator activity | 8.65E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 9.10E-03 |
| 42 | GO:0004518: nuclease activity | 1.05E-02 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.10E-02 |
| 44 | GO:0016791: phosphatase activity | 1.15E-02 |
| 45 | GO:0005200: structural constituent of cytoskeleton | 1.20E-02 |
| 46 | GO:0008237: metallopeptidase activity | 1.20E-02 |
| 47 | GO:0102483: scopolin beta-glucosidase activity | 1.46E-02 |
| 48 | GO:0030247: polysaccharide binding | 1.46E-02 |
| 49 | GO:0005096: GTPase activator activity | 1.62E-02 |
| 50 | GO:0008422: beta-glucosidase activity | 1.97E-02 |
| 51 | GO:0035091: phosphatidylinositol binding | 2.35E-02 |
| 52 | GO:0016301: kinase activity | 2.36E-02 |
| 53 | GO:0008234: cysteine-type peptidase activity | 2.95E-02 |
| 54 | GO:0015035: protein disulfide oxidoreductase activity | 3.61E-02 |
| 55 | GO:0016758: transferase activity, transferring hexosyl groups | 4.06E-02 |
| 56 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.22E-02 |
| 57 | GO:0004252: serine-type endopeptidase activity | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035339: SPOTS complex | 1.00E-04 |
| 2 | GO:0035101: FACT complex | 2.36E-04 |
| 3 | GO:0005719: nuclear euchromatin | 5.64E-04 |
| 4 | GO:0000323: lytic vacuole | 5.64E-04 |
| 5 | GO:0000815: ESCRT III complex | 1.38E-03 |
| 6 | GO:0005669: transcription factor TFIID complex | 1.87E-03 |
| 7 | GO:0009514: glyoxysome | 2.14E-03 |
| 8 | GO:0005886: plasma membrane | 3.81E-03 |
| 9 | GO:0005764: lysosome | 4.30E-03 |
| 10 | GO:0005615: extracellular space | 8.52E-03 |
| 11 | GO:0031965: nuclear membrane | 9.56E-03 |
| 12 | GO:0016021: integral component of membrane | 1.26E-02 |
| 13 | GO:0031201: SNARE complex | 2.10E-02 |
| 14 | GO:0005774: vacuolar membrane | 3.05E-02 |
| 15 | GO:0005783: endoplasmic reticulum | 3.12E-02 |
| 16 | GO:0005789: endoplasmic reticulum membrane | 3.37E-02 |
| 17 | GO:0005623: cell | 4.22E-02 |
| 18 | GO:0005777: peroxisome | 4.40E-02 |
| 19 | GO:0005759: mitochondrial matrix | 4.87E-02 |