co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G38970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
2	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
3	GO:0006108: malate metabolic process	1.19E-05
4	GO:0080093: regulation of photorespiration	1.48E-05
5	GO:0031998: regulation of fatty acid beta-oxidation	1.48E-05
6	GO:0051775: response to redox state	1.48E-05
7	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.05E-04
8	GO:0006107: oxaloacetate metabolic process	1.05E-04
9	GO:0006734: NADH metabolic process	1.45E-04
10	GO:0006542: glutamine biosynthetic process	1.45E-04
11	GO:0019676: ammonia assimilation cycle	1.45E-04
12	GO:0031122: cytoplasmic microtubule organization	1.45E-04
13	GO:0009853: photorespiration	1.63E-04
14	GO:0006099: tricarboxylic acid cycle	1.71E-04
15	GO:0010236: plastoquinone biosynthetic process	1.88E-04
16	GO:0006097: glyoxylate cycle	1.88E-04
17	GO:0043097: pyrimidine nucleoside salvage	1.88E-04
18	GO:0006206: pyrimidine nucleobase metabolic process	2.34E-04
19	GO:0009854: oxidative photosynthetic carbon pathway	2.82E-04
20	GO:0009735: response to cytokinin	3.24E-04
21	GO:0071482: cellular response to light stimulus	4.37E-04
22	GO:0006098: pentose-phosphate shunt	4.93E-04
23	GO:0006259: DNA metabolic process	6.08E-04
24	GO:0019538: protein metabolic process	6.08E-04
25	GO:0018119: peptidyl-cysteine S-nitrosylation	6.67E-04
26	GO:0006265: DNA topological change	6.67E-04
27	GO:0043085: positive regulation of catalytic activity	6.67E-04
28	GO:0006094: gluconeogenesis	7.91E-04
29	GO:0019253: reductive pentose-phosphate cycle	8.55E-04
30	GO:0006636: unsaturated fatty acid biosynthetic process	9.85E-04
31	GO:0008299: isoprenoid biosynthetic process	1.12E-03
32	GO:0030433: ubiquitin-dependent ERAD pathway	1.26E-03
33	GO:0019722: calcium-mediated signaling	1.41E-03
34	GO:0042631: cellular response to water deprivation	1.57E-03
35	GO:0006662: glycerol ether metabolic process	1.65E-03
36	GO:0007059: chromosome segregation	1.73E-03
37	GO:0007267: cell-cell signaling	2.24E-03
38	GO:0007568: aging	3.20E-03
39	GO:0034599: cellular response to oxidative stress	3.50E-03
40	GO:0000209: protein polyubiquitination	4.15E-03
41	GO:0055114: oxidation-reduction process	5.17E-03
42	GO:0006096: glycolytic process	5.55E-03
43	GO:0009058: biosynthetic process	7.65E-03
44	GO:0006810: transport	9.79E-03
45	GO:0005975: carbohydrate metabolic process	1.01E-02
46	GO:0046686: response to cadmium ion	1.04E-02
47	GO:0009658: chloroplast organization	1.25E-02
48	GO:0080167: response to karrikin	1.46E-02
49	GO:0015979: photosynthesis	1.60E-02
50	GO:0045454: cell redox homeostasis	1.66E-02
51	GO:0008152: metabolic process	2.07E-02
52	GO:0006457: protein folding	3.49E-02
53	GO:0042742: defense response to bacterium	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0008974: phosphoribulokinase activity	0.00E+00
2	GO:0008465: glycerate dehydrogenase activity	0.00E+00
3	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
4	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
5	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
6	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
7	GO:0016615: malate dehydrogenase activity	9.67E-07
8	GO:0030060: L-malate dehydrogenase activity	1.43E-06
9	GO:0008746: NAD(P)+ transhydrogenase activity	1.48E-05
10	GO:0008568: microtubule-severing ATPase activity	1.48E-05
11	GO:0050347: trans-octaprenyltranstransferase activity	3.88E-05
12	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	3.88E-05
13	GO:0048038: quinone binding	6.19E-05
14	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.45E-04
15	GO:0008453: alanine-glyoxylate transaminase activity	1.45E-04
16	GO:0004356: glutamate-ammonia ligase activity	1.88E-04
17	GO:0004332: fructose-bisphosphate aldolase activity	2.34E-04
18	GO:0004849: uridine kinase activity	2.82E-04
19	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	4.37E-04
20	GO:0008047: enzyme activator activity	6.08E-04
21	GO:0008266: poly(U) RNA binding	8.55E-04
22	GO:0047134: protein-disulfide reductase activity	1.49E-03
23	GO:0008080: N-acetyltransferase activity	1.65E-03
24	GO:0004791: thioredoxin-disulfide reductase activity	1.73E-03
25	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.07E-03
26	GO:0051287: NAD binding	4.60E-03
27	GO:0031625: ubiquitin protein ligase binding	5.31E-03
28	GO:0015035: protein disulfide oxidoreductase activity	6.44E-03
29	GO:0030170: pyridoxal phosphate binding	7.93E-03
30	GO:0016787: hydrolase activity	1.43E-02
31	GO:0061630: ubiquitin protein ligase activity	1.51E-02
32	GO:0004871: signal transducer activity	1.72E-02
33	GO:0016887: ATPase activity	2.63E-02
34	GO:0016740: transferase activity	3.34E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0009507: chloroplast	9.02E-14
3	GO:0048046: apoplast	2.40E-08
4	GO:0009570: chloroplast stroma	2.41E-07
5	GO:0009579: thylakoid	1.43E-06
6	GO:0009535: chloroplast thylakoid membrane	2.32E-06
7	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.55E-06
8	GO:0009941: chloroplast envelope	1.91E-05
9	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.45E-04
10	GO:0005777: peroxisome	4.33E-04
11	GO:0010319: stromule	2.24E-03
12	GO:0009295: nucleoid	2.24E-03
13	GO:0009707: chloroplast outer membrane	2.90E-03
14	GO:0022626: cytosolic ribosome	3.17E-03
15	GO:0031977: thylakoid lumen	3.82E-03
16	GO:0009534: chloroplast thylakoid	3.99E-03
17	GO:0010287: plastoglobule	7.10E-03
18	GO:0009536: plastid	8.17E-03
19	GO:0031969: chloroplast membrane	1.46E-02
20	GO:0005773: vacuole	3.55E-02